Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold115G32090 Striga asiatica HOM05D010872 ORTHO05D004477 6.4e-73 277.3 142 100.0
SGA_v2.0_scaffold45G17135 Striga asiatica HOM05D010872 ORTHO05D004477 1.7e-17 93.2 130 50.8
Migut.K01109 Erythranthe guttata HOM05D008046 ORTHO05D004477 5.7e-13 78.2 129 46.5
SalBow5G1479 Salvia bowleyana HOM05D008046 ORTHO05D004477 1.6e-10 70.1 144 42.4
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 1.5e-08 63.5 124 38.7
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 1.9e-08 63.2 118 44.1
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 3.3e-08 62.4 117 43.6
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 4.3e-08 62.0 110 44.5
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 4.3e-08 62.0 130 38.5
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 5.6e-08 61.6 113 45.1
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.6e-07 60.1 93 48.4
unitig_32.g11784 Utricularia gibba HOM05D008046 ORTHO05D004477 2.1e-07 59.7 117 42.7
Medtr5g064640 Medicago truncatula HOM05D008046 ORTHO05D004477 2.8e-07 59.3 62 54.8
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 3.6e-07 58.9 117 43.6
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 4.7e-07 58.5 112 43.8
Carub.0001s3286 Capsella rubella HOM05D010872 ORTHO05D013672 8.0e-07 57.8 97 47.4
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 8.0e-07 57.8 94 46.8
Gohir.D05G267950 Gossypium hirsutum HOM05D008046 ORTHO05D004477 1.0e-06 57.4 124 43.5
Gorai.009G280100 Gossypium raimondii HOM05D008046 ORTHO05D004477 1.0e-06 57.4 124 43.5
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 1.0e-06 57.4 121 39.7
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 1.4e-06 57.0 124 36.3
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 1.4e-06 57.0 140 40.7
FAN04G3140 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.8e-06 56.6 41 58.5
FAN13G0458 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.8e-06 56.6 41 58.5
FAN18G3731 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.8e-06 56.6 41 58.5
THA.LOC104809723 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 1.8e-06 56.6 63 55.6
FvH4_5g36590 Fragaria vesca HOM05D018381 ORTHO05D004477 2.3e-06 56.2 41 58.5
FAN08G1425 Fragaria x ananassa HOM05D018381 ORTHO05D004477 2.3e-06 56.2 41 58.5
THA.LOC104800226 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 2.3e-06 56.2 67 52.2
Thhalv10009293m.g Eutrema salsugineum HOM05D009138 ORTHO05D011294 4.0e-06 55.5 49 59.2
Sp1g29940 Schrenkiella parvula HOM05D010872 ORTHO05D013672 4.0e-06 55.5 33 75.8
THA.LOC104816630 Tarenaya hassleriana HOM05D010872 ORTHO05D013672 5.2e-06 55.1 39 64.1
CARHR287280 Cardamine hirsuta HOM05D010872 ORTHO05D013672 6.8e-06 54.7 23 100.0
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 6.8e-06 54.7 32 71.9
Duzib093G0605 Durio zibethinus HOM05D008046 ORTHO05D004477 6.8e-06 54.7 118 39.0
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 6.8e-06 54.7 141 37.6
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 8.9e-06 54.3 135 34.1
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 8.9e-06 54.3 136 37.5
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 8.9e-06 54.3 112 42.0
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 8.9e-06 54.3 32 71.9


User provided reference genes

Program Settings