Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 3.1e-92 341.7 160 100.0
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 5.2e-71 271.2 156 80.8
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 8.9e-71 270.4 154 80.5
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 8.9e-71 270.4 154 79.9
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 8.9e-71 270.4 155 79.4
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 4.4e-70 268.1 155 78.1
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 4.4e-70 268.1 155 78.7
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 5.8e-70 267.7 155 78.1
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 7.5e-70 267.3 155 79.4
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 1.9e-68 262.7 154 79.2
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 3.2e-68 261.9 155 76.8
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 5.4e-68 261.2 155 77.4
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 1.2e-67 260.0 155 76.8
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 1.6e-67 259.6 154 77.3
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 2.7e-67 258.8 155 76.1
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 4.6e-67 258.1 154 77.9
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 4.6e-67 258.1 154 77.9
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 4.6e-67 258.1 155 76.1
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 4.6e-67 258.1 155 76.8
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 6.0e-67 257.7 155 76.8
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 1.0e-66 256.9 151 77.5
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 1.0e-66 256.9 155 75.5
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 1.0e-66 256.9 155 75.5
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 1.3e-66 256.5 155 77.4
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 1.3e-66 256.5 155 74.8
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 1.7e-66 256.1 155 74.8
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 2.3e-66 255.8 155 75.5
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 2.3e-66 255.8 151 75.5
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 3.0e-66 255.4 151 75.5
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 3.0e-66 255.4 155 74.2
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 3.9e-66 255.0 155 75.5
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 3.9e-66 255.0 151 78.1
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 5.0e-66 254.6 151 76.8
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 5.0e-66 254.6 155 76.1
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 6.6e-66 254.2 154 75.3
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 1.1e-65 253.4 155 76.1
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 1.5e-65 253.1 155 76.1
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.5e-65 253.1 155 73.5
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 1.9e-65 252.7 155 73.5
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.9e-65 252.7 155 73.5
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 3.3e-65 251.9 153 76.5
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 3.3e-65 251.9 155 74.2
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 3.3e-65 251.9 155 75.5
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 3.3e-65 251.9 151 74.2
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 3.3e-65 251.9 151 74.2
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 3.3e-65 251.9 155 73.5
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 3.3e-65 251.9 153 75.2
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 4.3e-65 251.5 151 78.1
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 4.3e-65 251.5 154 76.0
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 4.3e-65 251.5 155 74.2
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 4.3e-65 251.5 155 74.2
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 5.6e-65 251.1 155 73.5
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 9.5e-65 250.4 155 74.2
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 1.2e-64 250.0 155 74.8
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 1.2e-64 250.0 152 79.6
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 1.2e-64 250.0 154 74.0
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 2.1e-64 249.2 154 76.0
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 2.8e-64 248.8 151 73.5
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 3.6e-64 248.4 155 72.3
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 3.6e-64 248.4 154 76.0
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 4.7e-64 248.1 154 74.7
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 4.7e-64 248.1 154 74.0
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 4.7e-64 248.1 154 74.0
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 4.7e-64 248.1 154 74.0
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 4.7e-64 248.1 154 74.7
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 6.2e-64 247.7 151 73.5
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 8.0e-64 247.3 154 74.0
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 8.0e-64 247.3 151 72.8
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 1.1e-63 246.9 155 73.5
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 2.3e-63 245.7 155 74.2
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 3.1e-63 245.4 151 74.8
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 3.1e-63 245.4 151 74.8
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 8.9e-63 243.8 151 72.8
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 1.5e-62 243.0 151 71.5
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 1.5e-62 243.0 151 72.2
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 2.0e-62 242.7 151 72.2
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 2.0e-62 242.7 151 72.2
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 2.0e-62 242.7 145 77.2
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 3.4e-62 241.9 154 70.8
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 3.4e-62 241.9 150 72.0
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 3.4e-62 241.9 151 71.5
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 3.4e-62 241.9 151 73.5
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 4.4e-62 241.5 151 71.5
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 4.4e-62 241.5 151 71.5
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 4.4e-62 241.5 151 71.5
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 4.4e-62 241.5 151 74.2
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 5.8e-62 241.1 151 72.2
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 2.2e-61 239.2 151 70.2
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 2.9e-61 238.8 151 70.2
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 3.7e-61 238.4 151 72.2
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 3.7e-61 238.4 151 71.5
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 4.9e-61 238.0 152 73.7
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 1.1e-60 236.9 151 70.9
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 1.1e-60 236.9 149 75.2
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 1.4e-60 236.5 152 71.7
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 1.4e-60 236.5 152 71.7
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 3.2e-60 235.3 151 70.9
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 3.2e-60 235.3 151 70.9
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 4.1e-60 235.0 151 71.5
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 7.0e-60 234.2 151 70.2
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.6e-59 233.0 152 70.4
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 3.5e-59 231.9 151 70.2
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 1.0e-58 230.3 151 68.9
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 1.7e-58 229.6 151 66.9
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 1.7e-58 229.6 151 66.9
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 5.1e-58 228.0 151 66.9
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 6.6e-58 227.6 151 66.2
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 6.6e-58 227.6 154 68.8
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 1.1e-57 226.9 151 66.9
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 1.1e-57 226.9 151 66.9
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 1.1e-57 226.9 155 70.3
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 2.5e-57 225.7 152 69.7
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 5.2e-55 218.0 151 69.5
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 1.2e-54 216.9 151 68.2
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 5.8e-54 214.5 118 82.2
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 7.1e-52 207.6 150 63.3
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 4.6e-51 204.9 133 66.9
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 7.8e-51 204.1 154 63.6
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 1.1e-49 200.3 170 59.4
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 5.1e-42 174.9 153 57.5
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 7.3e-41 171.0 153 56.2
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 7.3e-41 171.0 151 52.3
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 1.1e-39 167.2 157 54.8
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 1.5e-38 163.3 86 90.7
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.3e-34 149.4 95 74.7
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 1.5e-33 146.7 93 73.1
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 3.6e-32 142.1 152 45.4
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 1.3e-29 133.7 152 46.7
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 1.9e-25 119.8 76 77.6
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 1.6e-19 100.1 138 43.5
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 2.1e-16 89.7 95 45.3
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 1.4e-15 87.0 157 35.0
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 2.0e-06 56.6 62 50.0


User provided reference genes

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