Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G32030 Striga asiatica HOM05D007956 ORTHO05D010152 0.0e+00 1116.7 578 100.0
Migut.M01290 Erythranthe guttata HOM05D007956 ORTHO05D010152 4.8e-183 645.2 575 56.7
SalBow8G0305 Salvia bowleyana HOM05D007956 ORTHO05D010152 1.1e-182 644.0 580 55.7
MSTRG.15969 Avicennia marina HOM05D007956 ORTHO05D010152 8.7e-177 624.4 572 53.8
Oeu002723.1 Olea europaea HOM05D007956 ORTHO05D010152 1.0e-161 574.3 567 50.4
Cc02_g11640 Coffea canephora HOM05D007956 ORTHO05D010152 1.9e-139 500.4 557 45.1
COL.COLO4_06641 Corchorus olitorius HOM05D007956 ORTHO05D010152 6.1e-130 468.8 573 43.5
Duzib235G1205 Durio zibethinus HOM05D007956 ORTHO05D010152 6.8e-129 465.3 573 41.9
PGSC0003DMG400002071 Solanum tuberosum HOM05D007956 ORTHO05D010152 3.4e-128 463.0 557 42.7
Solyc02g080170.1 Solanum lycopersicum HOM05D007956 ORTHO05D010152 4.1e-126 456.1 557 42.2
Gorai.009G176500 Gossypium raimondii HOM05D007956 ORTHO05D010152 1.6e-125 454.1 567 40.4
TWI38G0189 Tripterygium wilfordii HOM05D007956 ORTHO05D010152 2.7e-125 453.4 556 41.5
CAN.G569.38 Capsicum annuum HOM05D007956 ORTHO05D010152 1.3e-124 451.1 556 43.7
TAR629G0629 Trochodendron aralioides HOM05D007956 ORTHO05D010152 6.6e-124 448.7 555 40.9
Sopen02g024890 Solanum pennellii HOM05D007956 ORTHO05D010152 8.0e-122 441.8 557 41.3
Sabra04G0011500 Salix brachista HOM05D007956 ORTHO05D010152 5.2e-121 439.1 555 42.7
PGR042G2623 Punica granatum HOM05D007956 ORTHO05D010152 1.3e-116 424.5 574 39.2
Nitab4.5_0005793g0030 Nicotiana tabacum HOM05D007956 ORTHO05D010152 1.2e-114 417.9 568 41.2
Lsat_1_v5_gn_4_59081 Lactuca sativa HOM05D007956 ORTHO05D010152 1.1e-113 414.8 578 38.8
Sc17g0007100 Simmondsia chinensis HOM05D007956 ORTHO05D010152 1.1e-113 414.8 556 41.5
Nitab4.5_0002347g0140 Nicotiana tabacum HOM05D007956 ORTHO05D010152 1.2e-112 411.4 568 41.7
HanXRQChr16g0515891 Helianthus annuus HOM05D007956 ORTHO05D010152 1.3e-111 407.9 560 37.9
Cfa000267 Carpinus fangiana HOM05D007956 ORTHO05D010152 1.7e-111 407.5 574 39.4
CiPaw.09G087900 Carya illinoinensis HOM05D007956 ORTHO05D010152 2.7e-109 400.2 573 42.6
vmacro03705 Vaccinium macrocarpon HOM05D007956 ORTHO05D010152 1.7e-108 397.5 575 39.1
Prupe.4G025500 Prunus persica HOM05D007956 ORTHO05D010152 3.3e-107 393.3 557 42.0
MD00G1180200 Malus domestica HOM05D007956 ORTHO05D010152 1.6e-106 391.0 566 41.7
Thecc.06G215000 Theobroma cacao HOM05D007956 ORTHO05D010152 2.8e-106 390.2 575 37.4
EL10Ac8g19997 Beta vulgaris HOM05D007956 ORTHO05D010152 1.4e-105 387.9 567 38.3
Ciclev10018367m.g Citrus clementina HOM05D007956 ORTHO05D010152 2.6e-104 383.6 569 38.1
Potri.004G020900 Populus trichocarpa HOM05D007956 ORTHO05D010152 6.4e-103 379.0 555 38.4
Thhalv10024760m.g Eutrema salsugineum HOM05D007956 ORTHO05D010152 5.1e-100 369.4 577 34.1
Carub.0007s2026 Capsella rubella HOM05D007956 ORTHO05D010152 1.1e-99 368.2 578 34.4
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 1.5e-96 357.8 384 47.4
MBI18_g39550_MAGBIO Magnolia biondii HOM05D007956 ORTHO05D010152 3.4e-96 356.7 569 38.0
CANSAT56G1376 Cannabis sativa HOM05D007956 ORTHO05D010152 5.8e-96 355.9 558 36.4
AL7G32950 Arabidopsis lyrata HOM05D007956 ORTHO05D010152 9.9e-96 355.1 578 33.4
Actinidia05532 Actinidia chinensis HOM05D007956 ORTHO05D010152 1.3e-95 354.8 514 37.7
AUR62012653 Chenopodium quinoa HOM05D007956 ORTHO05D010152 1.3e-95 354.8 556 37.1
AT4G21170 Arabidopsis thaliana HOM05D007956 ORTHO05D010152 1.6e-93 347.8 578 32.9
CARHR227750 Cardamine hirsuta HOM05D007956 ORTHO05D010152 3.5e-93 346.7 575 32.7
Sp7g19250 Schrenkiella parvula HOM05D007956 ORTHO05D010152 7.8e-93 345.5 577 32.6
Lj1P1226T19 Lonicera japonica HOM05D007956 ORTHO05D010152 1.0e-92 345.1 558 35.3
Manes.16G011600 Manihot esculenta HOM05D007956 ORTHO05D010152 6.6e-92 342.4 557 35.9
QL05p074803 Quercus lobata HOM05D007956 ORTHO05D010152 2.5e-91 340.5 380 46.8
BcaC09g51250 Brassica carinata HOM05D007956 ORTHO05D010152 4.3e-91 339.7 563 33.7
BcaNung03837 Brassica carinata HOM05D007956 ORTHO05D010152 1.6e-90 337.8 580 32.4
C01p15110 Brassica napus HOM05D007956 ORTHO05D010152 4.8e-90 336.3 563 33.6
BolC1t01460H Brassica oleracea HOM05D007956 ORTHO05D010152 4.8e-90 336.3 563 33.6
BraA01t01197Z Brassica rapa HOM05D007956 ORTHO05D010152 1.4e-89 334.7 565 32.7
Peaxi162Scf00427g00116 Petunia axillaris HOM05D007956 ORTHO05D010152 1.4e-89 334.7 561 35.3
A01p12520 Brassica napus HOM05D007956 ORTHO05D010152 2.4e-89 334.0 565 33.1
Ah.09g235260 Amaranthus hybridus HOM05D007956 ORTHO05D010152 3.3e-83 313.5 439 38.0
Gohir.D05G171300 Gossypium hirsutum HOM05D007956 ORTHO05D010152 7.6e-80 302.4 361 39.9
Eucgr.E04114 Eucalyptus grandis HOM05D007956 ORTHO05D010152 3.8e-79 300.1 557 32.0
THA.LOC104812478 Tarenaya hassleriana HOM05D007956 ORTHO05D010152 3.8e-79 300.1 563 31.4
RcHm_v2.0_Chr5g0003911 Rosa chinensis HOM05D007956 ORTHO05D010152 4.9e-79 299.7 364 43.4
FAN25G3383 Fragaria x ananassa HOM05D007956 ORTHO05D010152 1.8e-76 291.2 362 42.5
Haze_06747 Corylus avellana HOM05D007956 ORTHO05D010152 1.0e-71 275.4 521 33.4
Gohir.A05G168200 Gossypium hirsutum HOM05D007956 ORTHO05D010152 1.4e-70 271.6 341 38.7
AUR62022001 Chenopodium quinoa HOM05D007956 ORTHO05D010152 3.2e-70 270.4 439 34.6
DCAR_008134 Daucus carota HOM05D007956 ORTHO05D010152 5.1e-68 263.1 369 39.6
Nn1g07048 Nelumbo nucifera HOM05D007956 ORTHO05D010152 5.1e-68 263.1 379 35.6
Eucgr.E04115 Eucalyptus grandis HOM05D007956 ORTHO05D010152 1.3e-66 258.5 509 30.8
Aa31LG6G3180 Aethionema arabicum HOM05D007956 ORTHO05D010152 6.5e-63 246.1 560 29.6
CSS0009024 Camellia sinensis var. sinensis HOM05D007956 ORTHO05D009038 1.2e-56 225.3 378 34.7
Atru.chr10.2152 Acer truncatum HOM05D007956 ORTHO05D010152 1.0e-55 222.2 330 39.1
FAN21G4014 Fragaria x ananassa HOM05D007956 ORTHO05D010152 1.0e-55 222.2 251 45.4
FvH4_3g02620 Fragaria vesca HOM05D007956 ORTHO05D010152 9.4e-54 215.7 232 47.0
Aqoxy1G03672 Aquilegia oxysepala HOM05D007956 ORTHO05D010152 3.8e-47 193.7 441 33.3
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 4.2e-46 190.3 179 52.5
HPP92_010087 Vanilla planifolia HOM05D007956 ORTHO05D010152 1.5e-38 165.2 342 28.9
QL05p074780 Quercus lobata HOM05D000013 ORTHO05D000011 7.2e-38 162.9 201 42.3
Eucgr.L03252 Eucalyptus grandis HOM05D007956 ORTHO05D010152 1.2e-32 145.6 297 30.6
ATR0697G148 Amborella trichopoda HOM05D007956 ORTHO05D010152 3.6e-29 134.0 348 25.9
ATR0751G204 Amborella trichopoda HOM05D007956 ORTHO05D010152 2.7e-24 117.9 254 29.5
CDE05G3624 Ceratophyllum demersum HOM05D007956 ORTHO05D010152 2.3e-23 114.8 271 28.0
BcaB03g12921 Brassica carinata HOM05D007639 ORTHO05D009509 2.2e-18 98.2 285 27.7
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 1.1e-17 95.9 250 26.4
SEGI_16669 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 5.9e-16 90.1 188 25.0
MSTRG.1303 Avicennia marina HOM05D007639 ORTHO05D009509 1.7e-15 88.6 253 25.7
DCAR_023623 Daucus carota HOM05D007426 ORTHO05D009167 1.5e-14 85.5 237 24.9
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 9.5e-14 82.8 180 28.3
Migut.K01310 Erythranthe guttata HOM05D006569 ORTHO05D007515 9.5e-14 82.8 278 24.5
Carub.0004s0722 Capsella rubella HOM05D004824 ORTHO05D003903 1.2e-13 82.4 341 22.6
Gohir.A02G106600 Gossypium hirsutum HOM05D004783 ORTHO05D005581 3.6e-13 80.9 403 20.8
CsaV3_3G035890 Cucumis sativus L. HOM05D004255 ORTHO05D004815 2.0e-11 75.1 268 20.9
Sp4g08720 Schrenkiella parvula HOM05D004824 ORTHO05D003903 2.0e-11 75.1 411 20.0
Nn1g03517 Nelumbo nucifera HOM05D002890 ORTHO05D009847 2.6e-11 74.7 252 25.8
CiPaw.13G038100 Carya illinoinensis HOM05D000001 ORTHO05D000003 7.5e-11 73.2 300 21.7
Aqoxy2G03122 Aquilegia oxysepala HOM05D007128 ORTHO05D009059 1.3e-10 72.4 219 24.2
MELO3C009348.2 Cucumis melo HOM05D004255 ORTHO05D004815 1.3e-10 72.4 284 21.8
MSTRG.22851 Avicennia marina HOM05D005764 ORTHO05D006600 1.7e-10 72.0 199 24.1
SGA_v2.0_scaffold24G10272 Striga asiatica HOM05D007639 ORTHO05D009509 3.7e-10 70.9 216 24.5
Psat5g195760 Pisum sativum HOM05D006888 ORTHO05D008371 8.3e-10 69.7 296 24.0
MELO3C022082.2 Cucumis melo HOM05D002460 ORTHO05D002716 1.1e-09 69.3 389 20.3
CARHR164980 Cardamine hirsuta HOM05D006287 ORTHO05D008192 1.4e-09 68.9 247 24.3
BcaB01g04883 Brassica carinata HOM05D007340 ORTHO05D008979 2.4e-09 68.2 244 24.6
BraA02t05270Z Brassica rapa HOM05D006569 ORTHO05D007515 5.4e-09 67.0 360 21.7
SEGI_33508 Sequoiadendron giganteum HOM05D006858 ORTHO05D008767 5.4e-09 67.0 185 22.2
Peaxi162Scf00739g00044 Petunia axillaris HOM05D000001 ORTHO05D000003 1.2e-08 65.9 327 20.2
EL10Ac9g21792 Beta vulgaris HOM05D007083 ORTHO05D008801 1.6e-08 65.5 237 26.2
Glyma.05G004200 Glycine max HOM05D007358 ORTHO05D009117 1.6e-08 65.5 248 23.8
Psat6g186200 Pisum sativum HOM05D005287 ORTHO05D006893 1.6e-08 65.5 209 24.9
VMungo0464G1987 Vigna mungo HOM05D007358 ORTHO05D009117 2.7e-08 64.7 234 22.6
BcaC05g25040 Brassica carinata HOM05D002890 ORTHO05D009847 3.5e-08 64.3 248 25.0
C05p09820 Brassica napus HOM05D002890 ORTHO05D009847 3.5e-08 64.3 248 25.0
Duzib170G0445 Durio zibethinus HOM05D004255 ORTHO05D004815 3.5e-08 64.3 192 22.9
Prupe.7G165800 Prunus persica HOM05D006888 ORTHO05D008371 3.5e-08 64.3 217 23.5
MD09G1053400 Malus domestica HOM05D006569 ORTHO05D007515 4.6e-08 63.9 276 23.2
Ciclev10028146m.g Citrus clementina HOM05D000001 ORTHO05D000003 7.8e-08 63.2 181 24.3
Gohir.A05G286700 Gossypium hirsutum HOM05D000001 ORTHO05D000003 7.8e-08 63.2 210 22.9
Psat1g055280 Pisum sativum HOM05D007358 ORTHO05D009117 7.8e-08 63.2 176 24.4
Gorai.009G302600 Gossypium raimondii HOM05D000001 ORTHO05D000003 1.0e-07 62.8 278 21.6
Rhsim01G0260800 Rhododendron simsii HOM05D004783 ORTHO05D005581 1.0e-07 62.8 273 26.4
Gohir.A08G137650 Gossypium hirsutum HOM05D000104 ORTHO05D008354 1.3e-07 62.4 400 18.2
CAN.G479.71 Capsicum annuum HOM05D007173 ORTHO05D009151 1.7e-07 62.0 349 20.9
Cpa.g.sc14.98 Carica papaya HOM05D006569 ORTHO05D007515 1.7e-07 62.0 255 22.0
Phvul.004G009945 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.7e-07 62.0 241 22.8
SEGI_00392 Sequoiadendron giganteum HOM05D007208 ORTHO05D009090 1.7e-07 62.0 349 20.3
SGA_v2.0_scaffold236G43766 Striga asiatica HOM05D006569 ORTHO05D007515 1.7e-07 62.0 334 20.1
arahy.Tifrunner.gnm1.ann1.LQ1LZI Arachis hypogaea HOM05D007409 ORTHO05D009264 3.0e-07 61.2 152 23.0
Dinv33774 Davidia involucrata HOM05D006569 ORTHO05D007515 3.0e-07 61.2 239 20.9
Gohir.D06G156500 Gossypium hirsutum HOM05D000001 ORTHO05D009952 3.0e-07 61.2 358 20.4
Nitab4.5_0006134g0060 Nicotiana tabacum HOM05D000424 ORTHO05D000355 3.0e-07 61.2 146 25.3
Ah.01g019870 Amaranthus hybridus HOM05D007083 ORTHO05D008801 3.9e-07 60.8 119 28.6
Duzib235G0261 Durio zibethinus HOM05D000001 ORTHO05D009952 3.9e-07 60.8 355 19.4
Peaxi162Scf00087g00126 Petunia axillaris HOM05D005973 ORTHO05D007285 3.9e-07 60.8 217 23.5
ClCG09G010340 Citrullus lanatus HOM05D006569 ORTHO05D007515 5.0e-07 60.5 225 24.0
Hma1.2p1_0511F.1_g169170 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 5.0e-07 60.5 221 24.0
Lalb_Chr10g0095481 Lupinus albus HOM05D006858 ORTHO05D008767 5.0e-07 60.5 214 22.9
Phvul.004G009809 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 5.0e-07 60.5 231 22.5
SEGI_23973 Sequoiadendron giganteum HOM05D007063 ORTHO05D008822 5.0e-07 60.5 210 23.3
TAR371G0591 Trochodendron aralioides HOM05D006569 ORTHO05D007515 5.0e-07 60.5 308 21.1
AL1G29000 Arabidopsis lyrata HOM05D007552 ORTHO05D009397 6.6e-07 60.1 206 26.2
AUR62016660 Chenopodium quinoa HOM05D007083 ORTHO05D008801 6.6e-07 60.1 238 24.4
CsaV3_7G024320 Cucumis sativus L. HOM05D006569 ORTHO05D007515 6.6e-07 60.1 235 23.8
Hma1.2p1_2025F.1_g311460 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 6.6e-07 60.1 221 24.0
THA.LOC104819595 Tarenaya hassleriana HOM05D007083 ORTHO05D008801 6.6e-07 60.1 92 29.3
CDE06G1744 Ceratophyllum demersum HOM05D000591 ORTHO05D000579 8.6e-07 59.7 269 21.6
Cc01_g05550 Coffea canephora HOM05D000001 ORTHO05D000003 8.6e-07 59.7 274 20.4
MELO3C004188.2 Cucumis melo HOM05D006888 ORTHO05D008371 8.6e-07 59.7 263 22.1
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 1.1e-06 59.3 164 25.6
AT5G55840 Arabidopsis thaliana HOM05D007390 ORTHO05D009114 1.1e-06 59.3 168 23.8
BraA10t43400Z Brassica rapa HOM05D007390 ORTHO05D009114 1.1e-06 59.3 167 25.1
MBI13_g31535_MAGBIO Magnolia biondii HOM05D006842 ORTHO05D008908 1.1e-06 59.3 235 24.7
Nitab4.5_0000316g0260 Nicotiana tabacum HOM05D005973 ORTHO05D007285 1.1e-06 59.3 217 25.8
SGA_v2.0_scaffold25G10745 Striga asiatica HOM05D007893 ORTHO05D010042 1.1e-06 59.3 156 25.6
AL3G47400 Arabidopsis lyrata HOM05D007083 ORTHO05D008801 1.5e-06 58.9 167 25.1
CANSAT01G2464 Cannabis sativa HOM05D007486 ORTHO05D003673 1.5e-06 58.9 288 22.2
MELO3C015131.2 Cucumis melo HOM05D007455 ORTHO05D009431 1.5e-06 58.9 136 29.4
Gorai.010G182900 Gossypium raimondii HOM05D000001 ORTHO05D009952 1.5e-06 58.9 358 20.1
Lj3g0005449 Lotus japonicus HOM05D006888 ORTHO05D008371 1.5e-06 58.9 187 25.1
Phvul.003G017200 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.5e-06 58.9 231 22.5
Thecc.09G346900 Theobroma cacao HOM05D004255 ORTHO05D004815 1.5e-06 58.9 193 24.9
CAN.G630.84 Capsicum annuum HOM05D006556 ORTHO05D008146 1.9e-06 58.5 213 23.9
Lsat_1_v5_gn_1_100901 Lactuca sativa HOM05D005973 ORTHO05D007285 1.9e-06 58.5 253 20.6
Phvul.004G009900 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.9e-06 58.5 243 22.6
Sopen10g022700 Solanum pennellii HOM05D007675 ORTHO05D009699 1.9e-06 58.5 420 17.4
CANSAT01G2277 Cannabis sativa HOM05D007486 ORTHO05D003673 2.5e-06 58.2 317 22.4
CAN.G1642.5 Capsicum annuum HOM05D004824 ORTHO05D003903 2.5e-06 58.2 275 20.7
Sabra17G0075800 Salix brachista HOM05D006569 ORTHO05D007515 2.5e-06 58.2 315 20.6
CiPaw.04G004700 Carya illinoinensis HOM05D006569 ORTHO05D007515 3.3e-06 57.8 231 22.1
HanXRQChr14g0444491 Helianthus annuus HOM05D007291 ORTHO05D009038 3.3e-06 57.8 247 21.1
Lalb_Chr01g0001501 Lupinus albus HOM05D006888 ORTHO05D008371 3.3e-06 57.8 181 25.4
Medtr6g005000 Medicago truncatula HOM05D007358 ORTHO05D009117 3.3e-06 57.8 183 23.0
Zm00001eb191870 Zea mays HOM05D011046 ORTHO05D013342 3.3e-06 57.8 186 26.3
Dinv21881 Davidia involucrata HOM05D000104 ORTHO05D009920 4.3e-06 57.4 174 23.0
Gohir.A06G150300 Gossypium hirsutum HOM05D000001 ORTHO05D009952 4.3e-06 57.4 146 27.4
Psat5g196040 Pisum sativum HOM05D006888 ORTHO05D008371 4.3e-06 57.4 194 23.2
QL11p039208 Quercus lobata HOM05D007083 ORTHO05D008801 5.6e-06 57.0 170 27.1
PGSC0003DMG401009781 Solanum tuberosum HOM05D007173 ORTHO05D009151 5.6e-06 57.0 356 21.3
Zm00001eb272070 Zea mays HOM05D011046 ORTHO05D013342 5.6e-06 57.0 185 25.4
Zm00001eb324030 Zea mays HOM05D011046 ORTHO05D013342 5.6e-06 57.0 185 25.4
Zm00001eb336430 Zea mays HOM05D011046 ORTHO05D013342 5.6e-06 57.0 185 25.4
Zm00001eb427360 Zea mays HOM05D011046 ORTHO05D013342 5.6e-06 57.0 185 25.4
Zm00001eb442860 Zea mays HOM05D011046 ORTHO05D013342 5.6e-06 57.0 185 25.4
CsaV3_1G043280 Cucumis sativus L. HOM05D007455 ORTHO05D009431 7.3e-06 56.6 136 29.4
SEGI_08842 Sequoiadendron giganteum HOM05D006842 ORTHO05D008908 7.3e-06 56.6 126 27.0
Sopen10g021030 Solanum pennellii HOM05D007173 ORTHO05D009151 7.3e-06 56.6 355 21.4
Actinidia14742 Actinidia chinensis HOM05D008483 ORTHO05D018225 9.5e-06 56.2 147 29.3
Ca_11225_v3 Cicer arietinum L. HOM05D007202 ORTHO05D009125 9.5e-06 56.2 187 32.1
Gorai.004G065800 Gossypium raimondii HOM05D007893 ORTHO05D010042 9.5e-06 56.2 245 23.7
Zm00001eb121340 Zea mays HOM05D011046 ORTHO05D013342 9.5e-06 56.2 185 25.4
Zm00001eb398710 Zea mays HOM05D011046 ORTHO05D013342 9.5e-06 56.2 185 25.4


User provided reference genes

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