Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 3.5e-80 301.6 156 100.0
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 6.6e-71 270.8 156 92.9
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 2.5e-62 242.3 156 81.4
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 4.0e-60 235.0 151 79.5
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 4.0e-60 235.0 152 80.3
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 5.3e-60 234.6 150 79.3
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.5e-59 233.0 151 79.5
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 3.4e-59 231.9 151 78.8
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.3e-58 229.9 151 77.5
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 6.4e-58 227.6 151 76.8
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 6.4e-58 227.6 151 76.8
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 8.4e-58 227.3 151 76.2
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 8.4e-58 227.3 151 75.5
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 1.1e-57 226.9 151 76.2
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 1.9e-57 226.1 150 76.0
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 2.4e-57 225.7 151 75.5
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 2.4e-57 225.7 151 76.2
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 3.2e-57 225.3 151 74.8
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 4.2e-57 224.9 151 75.5
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 4.2e-57 224.9 151 77.5
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 5.4e-57 224.6 151 74.8
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 5.4e-57 224.6 151 76.2
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 5.4e-57 224.6 147 78.2
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 7.1e-57 224.2 151 74.8
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 9.3e-57 223.8 151 78.1
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 9.3e-57 223.8 150 76.0
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 9.3e-57 223.8 151 76.2
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 9.3e-57 223.8 151 75.5
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 1.2e-56 223.4 151 74.8
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 1.6e-56 223.0 151 74.8
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 2.1e-56 222.6 151 74.8
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 3.5e-56 221.9 151 75.5
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 3.5e-56 221.9 151 74.2
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 4.6e-56 221.5 150 74.7
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 7.9e-56 220.7 154 72.7
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 1.0e-55 220.3 151 72.8
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 1.3e-55 219.9 151 73.5
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 1.8e-55 219.5 152 73.0
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 1.8e-55 219.5 151 73.5
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 2.3e-55 219.2 152 76.3
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 5.1e-55 218.0 151 70.9
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 5.1e-55 218.0 151 73.5
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 6.7e-55 217.6 151 73.5
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 6.7e-55 217.6 151 72.8
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 1.5e-54 216.5 147 74.8
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 3.3e-54 215.3 151 72.2
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 4.3e-54 214.9 150 73.3
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 4.3e-54 214.9 150 73.3
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 4.3e-54 214.9 151 71.5
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 4.3e-54 214.9 151 72.2
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 4.3e-54 214.9 147 74.1
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 5.6e-54 214.5 151 72.2
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 5.6e-54 214.5 147 74.1
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 7.4e-54 214.2 168 67.9
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 9.6e-54 213.8 150 72.7
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.6e-53 213.0 151 71.5
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 1.6e-53 213.0 151 71.5
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 2.1e-53 212.6 141 78.7
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 6.2e-53 211.1 151 70.9
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 1.4e-52 209.9 150 71.3
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 1.8e-52 209.5 139 79.1
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 9.0e-52 207.2 151 70.9
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 2.0e-51 206.1 151 72.8
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 5.8e-51 204.5 160 69.4
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 9.9e-51 203.8 146 70.5
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 9.9e-51 203.8 150 66.7
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 2.9e-50 202.2 151 70.2
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 6.4e-50 201.1 158 68.4
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 1.2e-48 196.8 140 70.0
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 4.6e-48 194.9 151 69.5
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 4.6e-48 194.9 152 67.8
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 6.0e-48 194.5 151 66.2
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 1.0e-47 193.7 151 67.5
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 1.3e-47 193.4 151 69.5
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 5.6e-46 188.0 148 66.9
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 9.6e-46 187.2 198 57.1
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 9.6e-46 187.2 150 66.0
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 2.4e-44 182.6 121 76.9
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 4.0e-44 181.8 150 65.3
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.5e-43 179.9 151 62.3
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 2.0e-43 179.5 156 61.5
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 7.6e-43 177.6 121 74.4
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 7.1e-41 171.0 166 56.6
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 1.8e-39 166.4 120 69.2
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 5.7e-38 161.4 137 62.0
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 1.6e-37 159.8 153 55.6
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.6e-37 159.8 131 65.6
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 4.8e-37 158.3 145 55.9
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 1.1e-36 157.1 151 53.6
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 1.4e-36 156.8 151 53.6
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 1.8e-36 156.4 151 53.0
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 4.1e-36 155.2 151 53.0
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 4.1e-36 155.2 151 53.0
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 5.3e-36 154.8 151 52.3
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 9.0e-36 154.1 151 52.3
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 1.5e-35 153.3 151 52.3
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 1.5e-35 153.3 151 53.0
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 4.5e-35 151.8 151 51.7
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 4.5e-35 151.8 151 51.7
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 5.9e-35 151.4 151 51.0
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 7.7e-35 151.0 151 51.7
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 7.7e-35 151.0 151 51.7
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 7.7e-35 151.0 148 50.0
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 1.0e-34 150.6 143 53.1
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 1.0e-34 150.6 151 55.6
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 2.2e-34 149.4 126 63.5
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 2.7e-32 142.5 123 64.2
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 2.0e-30 136.3 152 51.3
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 2.5e-30 136.0 110 64.5
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 2.5e-30 136.0 151 51.0
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 8.2e-29 131.0 156 53.8
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 3.6e-24 115.5 91 64.8
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 1.0e-23 114.0 66 80.3
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 5.3e-20 101.7 75 66.7
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 2.3e-15 86.3 75 54.7
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.5e-14 83.6 56 80.4
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 6.3e-13 78.2 150 38.7
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 9.1e-12 74.3 71 53.5
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 1.4e-07 60.5 41 70.7
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 3.0e-07 59.3 31 90.3
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 2.6e-06 56.2 37 75.7


User provided reference genes

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