Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G32014 Striga asiatica HOM05D008179 ORTHO05D009362 8.8e-223 776.5 371 100.0
SGA_v2.0_scaffold7G03894 Striga asiatica HOM05D008179 ORTHO05D009362 9.5e-92 341.3 361 52.1
SalBow8G3222 Salvia bowleyana HOM05D008179 ORTHO05D009362 8.4e-56 221.9 331 37.2
QL93p0073_1249 Quercus lobata HOM05D008179 ORTHO05D009362 5.8e-41 172.6 348 30.7
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 7.1e-39 165.6 348 32.8
DCAR_008111 Daucus carota HOM05D008179 ORTHO05D009362 4.3e-36 156.4 349 31.2
SalBow6G4060 Salvia bowleyana HOM05D008179 ORTHO05D009362 1.3e-35 154.8 330 30.3
Lj1C1222G5 Lonicera japonica HOM05D008179 ORTHO05D009362 1.6e-35 154.5 344 32.3
DCAR_008113 Daucus carota HOM05D008179 ORTHO05D009362 1.5e-33 147.9 346 31.2
Dinv18942 Davidia involucrata HOM05D008179 ORTHO05D009362 3.8e-32 143.3 266 33.8
DCAR_008110 Daucus carota HOM05D008179 ORTHO05D009362 6.7e-29 132.5 339 28.3
QL05p077156 Quercus lobata HOM05D008179 ORTHO05D009362 1.6e-27 127.9 348 27.6
TAR624G0619 Trochodendron aralioides HOM05D008179 ORTHO05D009362 5.0e-24 116.3 300 30.0
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 1.6e-22 111.3 343 26.8
Manes.11G148800 Manihot esculenta HOM05D008179 ORTHO05D009362 2.6e-20 104.0 348 27.6
Dinv18943 Davidia involucrata HOM05D008179 ORTHO05D009362 1.4e-15 88.2 291 24.7
MD10G1212400 Malus domestica HOM05D008179 ORTHO05D009362 1.2e-14 85.1 360 23.1
Nitab4.5_0009524g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.3e-11 75.1 268 25.4
Nitab4.5_0009524g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.4e-10 70.9 257 24.9
DCAR_008112 Daucus carota HOM05D008179 ORTHO05D009362 3.1e-10 70.5 229 27.9
Oeu050288.1 Olea europaea HOM05D000007 ORTHO05D000017 4.1e-10 70.1 289 24.2
Nitab4.5_0010389g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 7.7e-09 65.9 173 26.6
BolC9t53809H Brassica oleracea HOM05D000171 ORTHO05D000101 1.3e-08 65.1 302 24.8
SGA_v2.0_scaffold4G02230 Striga asiatica HOM05D000007 ORTHO05D000017 1.3e-08 65.1 311 24.8
Lj6g0019357 Lotus japonicus HOM05D000007 ORTHO05D000017 1.7e-08 64.7 245 24.1
PGSC0003DMG400044507 Solanum tuberosum HOM05D009034 ORTHO05D009362 1.7e-08 64.7 280 23.9
MSTRG.10148 Avicennia marina HOM05D000007 ORTHO05D000017 2.2e-08 64.3 373 23.9
Prupe.4G112200 Prunus persica HOM05D008179 ORTHO05D009362 2.2e-08 64.3 357 21.3
Dinv38361 Davidia involucrata HOM05D000007 ORTHO05D000017 2.9e-08 63.9 256 23.0
Haze_21347 Corylus avellana HOM05D007726 ORTHO05D008819 3.8e-08 63.5 276 25.7
vmacro18930 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 3.8e-08 63.5 227 26.0
Ciclev10015458m.g Citrus clementina HOM05D000007 ORTHO05D000521 6.5e-08 62.8 203 23.2
CAN.G375.46 Capsicum annuum HOM05D000007 ORTHO05D000017 1.5e-07 61.6 217 25.8
Dinv05295 Davidia involucrata HOM05D000007 ORTHO05D000039 1.5e-07 61.6 160 26.9
CAN.G108.40 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-07 61.2 185 25.4
Oeu030915.1 Olea europaea HOM05D000007 ORTHO05D000039 1.9e-07 61.2 383 22.2
Cfa012989 Carpinus fangiana HOM05D007726 ORTHO05D008819 2.5e-07 60.8 276 25.0
Haze_21353 Corylus avellana HOM05D007726 ORTHO05D008819 2.5e-07 60.8 276 25.4
Migut.C01211 Erythranthe guttata HOM05D000007 ORTHO05D000521 2.5e-07 60.8 241 27.8
Thhalv10027439m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.5e-07 60.8 272 24.6
Hma1.2p1_1292F.1_g273710 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 2.5e-07 60.8 234 26.9
Dinv05294 Davidia involucrata HOM05D000007 ORTHO05D000039 4.2e-07 60.1 160 26.2
Eucgr.B03076 Eucalyptus grandis HOM05D000171 ORTHO05D000101 4.2e-07 60.1 318 23.0
C09p08970 Brassica napus HOM05D000171 ORTHO05D000101 7.2e-07 59.3 319 23.5
Aqoxy1G04045 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 9.4e-07 58.9 247 25.5
BolC9t53806H Brassica oleracea HOM05D000171 ORTHO05D000101 9.4e-07 58.9 299 24.7
Migut.C01214 Erythranthe guttata HOM05D000007 ORTHO05D000521 9.4e-07 58.9 266 24.1
Lj1P788T10 Lonicera japonica HOM05D000007 ORTHO05D000017 1.6e-06 58.2 232 25.4
SalBow1G7251 Salvia bowleyana HOM05D000007 ORTHO05D000017 1.6e-06 58.2 199 28.6
AT1G50870 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.1e-06 57.8 185 26.5
EL10Ac9g22695 Beta vulgaris HOM05D000007 ORTHO05D000039 2.1e-06 57.8 362 22.4
BcaC04g23384 Brassica carinata HOM05D000171 ORTHO05D000101 2.1e-06 57.8 319 23.8
Oeu002398.1 Olea europaea HOM05D000007 ORTHO05D000039 2.1e-06 57.8 382 22.8
Sopen11g007290 Solanum pennellii HOM05D000007 ORTHO05D000017 2.1e-06 57.8 235 24.7
A05p14170 Brassica napus HOM05D000171 ORTHO05D000101 2.7e-06 57.4 388 22.2
CANSAT56G1116 Cannabis sativa HOM05D000007 ORTHO05D000017 2.7e-06 57.4 117 33.3
FAN19G1029 Fragaria x ananassa HOM05D001321 ORTHO05D002372 2.7e-06 57.4 217 24.9
Phvul.006G157000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 2.7e-06 57.4 271 23.6
PGSC0003DMG400013290 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.7e-06 57.4 250 26.0
PGSC0003DMG400046539 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.7e-06 57.4 160 30.0
Thhalv10026790m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.6e-06 57.0 286 23.4
Oeu022123.1 Olea europaea HOM05D000007 ORTHO05D000017 3.6e-06 57.0 267 25.8
Cc00_g01300 Coffea canephora HOM05D000007 ORTHO05D000017 4.7e-06 56.6 239 25.5
arahy.Tifrunner.gnm1.ann1.SE5UPX Arachis hypogaea HOM05D000007 ORTHO05D000017 8.0e-06 55.8 254 21.7


User provided reference genes

Program Settings