Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 3.2e-72 275.0 142 100.0
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 5.5e-48 194.5 117 87.2
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 6.1e-47 191.0 117 84.6
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 7.9e-47 190.7 117 84.6
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 1.0e-46 190.3 118 84.7
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 1.4e-46 189.9 117 83.8
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 1.4e-46 189.9 117 83.8
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 1.8e-46 189.5 118 82.2
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 3.9e-46 188.3 116 83.6
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 5.1e-46 188.0 117 83.8
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 5.1e-46 188.0 114 86.8
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 6.7e-46 187.6 116 84.5
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 6.7e-46 187.6 116 84.5
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.1e-45 186.8 117 82.1
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 1.5e-45 186.4 116 83.6
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 3.3e-45 185.3 117 82.1
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 5.7e-45 184.5 117 82.1
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 7.4e-45 184.1 116 85.3
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 7.4e-45 184.1 117 82.9
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 9.7e-45 183.7 118 83.1
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 1.7e-44 183.0 116 84.5
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 1.7e-44 183.0 116 83.6
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 1.7e-44 183.0 117 79.5
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 1.7e-44 183.0 117 83.8
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 1.7e-44 183.0 116 82.8
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 1.7e-44 183.0 117 83.8
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 2.8e-44 182.2 117 81.2
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 2.8e-44 182.2 101 91.1
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 3.7e-44 181.8 117 79.5
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 3.7e-44 181.8 117 82.9
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 3.7e-44 181.8 117 82.9
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 3.7e-44 181.8 115 82.6
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 3.7e-44 181.8 117 78.6
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 4.8e-44 181.4 117 80.3
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 6.3e-44 181.0 116 81.0
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 6.3e-44 181.0 117 80.3
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 1.1e-43 180.3 117 81.2
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 1.4e-43 179.9 116 81.9
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 1.8e-43 179.5 116 79.3
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.4e-43 179.1 117 82.1
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 2.4e-43 179.1 117 81.2
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 2.4e-43 179.1 116 81.9
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 3.1e-43 178.7 116 81.0
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 3.1e-43 178.7 117 81.2
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 3.1e-43 178.7 116 78.4
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 3.1e-43 178.7 116 79.3
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 3.1e-43 178.7 116 79.3
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 4.1e-43 178.3 117 80.3
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 4.1e-43 178.3 116 81.9
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 4.1e-43 178.3 117 80.3
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 4.1e-43 178.3 117 82.1
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 5.3e-43 177.9 117 79.5
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 5.3e-43 177.9 116 81.0
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 5.3e-43 177.9 116 81.0
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 5.3e-43 177.9 118 80.5
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 5.3e-43 177.9 120 78.3
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 9.1e-43 177.2 117 79.5
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 1.2e-42 176.8 117 80.3
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 1.5e-42 176.4 117 76.1
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 1.5e-42 176.4 116 81.0
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 1.5e-42 176.4 117 80.3
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 2.0e-42 176.0 116 80.2
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 2.0e-42 176.0 118 81.4
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 2.6e-42 175.6 117 79.5
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 2.6e-42 175.6 117 80.3
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 3.4e-42 175.3 117 79.5
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 4.5e-42 174.9 117 79.5
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 4.5e-42 174.9 119 78.2
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 5.9e-42 174.5 116 79.3
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 5.9e-42 174.5 116 78.4
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 7.7e-42 174.1 117 77.8
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 7.7e-42 174.1 117 77.8
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 7.7e-42 174.1 119 81.5
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 7.7e-42 174.1 116 79.3
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 7.7e-42 174.1 117 78.6
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 7.7e-42 174.1 117 78.6
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 7.7e-42 174.1 117 76.1
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 1.3e-41 173.3 119 79.0
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 1.3e-41 173.3 119 79.0
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 1.3e-41 173.3 119 79.0
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.7e-41 172.9 117 77.8
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.7e-41 172.9 117 77.8
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 2.2e-41 172.6 142 68.3
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 2.9e-41 172.2 116 78.4
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 5.0e-41 171.4 117 76.9
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 6.5e-41 171.0 119 79.0
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 6.5e-41 171.0 118 77.1
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 6.5e-41 171.0 117 76.9
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 8.5e-41 170.6 119 78.2
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 8.5e-41 170.6 116 75.9
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 1.1e-40 170.2 118 77.1
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.1e-40 170.2 116 76.7
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 1.4e-40 169.9 118 76.3
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 1.4e-40 169.9 118 76.3
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 2.5e-40 169.1 116 75.9
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 5.5e-40 167.9 120 78.3
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 5.5e-40 167.9 116 77.6
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 7.2e-40 167.5 100 87.0
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 7.2e-40 167.5 117 76.9
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 9.4e-40 167.2 117 78.6
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 9.4e-40 167.2 117 78.6
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 9.4e-40 167.2 121 76.9
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 2.1e-39 166.0 117 77.8
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 2.7e-39 165.6 112 77.7
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 4.7e-39 164.9 117 76.1
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 2.3e-38 162.5 117 70.1
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 6.7e-38 161.0 111 77.5
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 2.0e-37 159.5 117 71.8
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 1.3e-36 156.8 110 74.5
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 1.3e-36 156.8 116 71.6
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 2.2e-36 156.0 116 67.2
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 8.2e-36 154.1 117 67.5
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 4.1e-35 151.8 116 67.2
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 5.0e-33 144.8 87 85.1
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.4e-30 136.7 87 82.8
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.8e-30 136.3 92 80.4
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 5.2e-30 134.8 87 81.6
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 6.3e-28 127.9 116 57.8
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 4.1e-27 125.2 114 53.5
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 2.7e-26 122.5 105 64.8
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 3.2e-24 115.5 92 69.6
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 1.1e-19 100.5 56 87.5
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 7.0e-19 97.8 74 73.0
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 4.5e-18 95.1 63 71.4
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 1.3e-17 93.6 77 68.8
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 6.1e-15 84.7 109 53.2
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 8.0e-15 84.3 66 71.2
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 2.7e-10 69.3 78 55.1
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 2.1e-07 59.7 105 35.2
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 3.0e-06 55.8 123 33.3


User provided reference genes

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