Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 1.1e-215 753.1 382 100.0
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 4.0e-170 601.7 378 79.6
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 9.9e-169 597.0 380 80.3
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 6.4e-168 594.3 379 80.7
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.6e-155 553.1 378 73.5
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 4.2e-143 511.9 381 70.3
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 1.8e-141 506.5 371 70.6
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 8.2e-139 497.7 379 69.4
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 8.2e-139 497.7 379 69.4
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 8.2e-139 497.7 384 66.1
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 3.1e-138 495.7 385 67.0
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 6.9e-138 494.6 374 69.5
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 6.9e-138 494.6 380 67.4
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 3.4e-137 492.3 383 68.4
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 1.0e-136 490.7 375 66.7
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 1.3e-136 490.3 383 67.1
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 1.3e-136 490.3 379 67.0
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 2.9e-136 489.2 387 65.6
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 3.8e-136 488.8 380 66.3
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 6.5e-136 488.0 378 66.1
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 1.1e-135 487.3 354 70.6
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 1.4e-135 486.9 383 65.5
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 2.1e-134 483.0 316 74.7
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 2.7e-134 482.6 379 64.9
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 6.1e-134 481.5 381 64.3
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 6.1e-134 481.5 381 64.8
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 6.1e-134 481.5 376 65.2
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 2.3e-133 479.6 381 64.6
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 2.3e-133 479.6 378 66.4
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 3.9e-133 478.8 381 67.5
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 5.1e-133 478.4 378 65.9
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 5.1e-133 478.4 321 72.3
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 1.9e-132 476.5 371 64.7
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 1.9e-132 476.5 321 72.0
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 2.5e-132 476.1 377 66.0
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 5.7e-132 474.9 376 64.1
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 7.4e-132 474.6 375 64.3
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 7.4e-132 474.6 345 68.4
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 9.7e-132 474.2 382 66.0
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 9.7e-132 474.2 374 64.7
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 9.7e-132 474.2 380 66.3
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 1.3e-131 473.8 376 64.9
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 1.3e-131 473.8 380 65.0
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 1.3e-131 473.8 375 64.8
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 1.6e-131 473.4 380 65.0
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 2.2e-131 473.0 384 65.1
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 2.2e-131 473.0 378 64.8
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 4.8e-131 471.9 379 63.1
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 6.3e-131 471.5 381 63.5
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 1.1e-130 470.7 375 63.5
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 4.1e-130 468.8 377 62.3
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 5.3e-130 468.4 377 63.7
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 6.9e-130 468.0 381 64.8
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 1.2e-129 467.2 359 66.9
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 2.0e-129 466.5 342 69.0
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 4.5e-129 465.3 355 65.9
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 5.9e-129 464.9 318 71.4
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 1.0e-128 464.2 378 64.8
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.0e-128 464.2 397 60.7
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 1.7e-128 463.4 378 63.8
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 1.7e-128 463.4 382 63.9
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 1.7e-128 463.4 285 78.6
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 2.2e-128 463.0 376 63.6
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 2.9e-128 462.6 365 66.6
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 6.5e-128 461.5 349 67.3
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 8.5e-128 461.1 381 63.3
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 2.1e-126 456.4 371 65.8
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 2.7e-126 456.1 382 63.4
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 2.7e-126 456.1 382 63.4
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 4.6e-126 455.3 382 63.4
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 4.6e-126 455.3 380 64.2
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 7.9e-126 454.5 379 62.8
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 1.8e-125 453.4 319 70.8
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.0e-124 449.9 366 63.4
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 6.3e-123 444.9 306 72.2
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.1e-122 444.1 392 60.7
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 1.4e-122 443.7 382 61.5
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.4e-122 443.7 286 74.5
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 4.1e-122 442.2 374 63.1
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 4.1e-122 442.2 345 66.1
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 9.1e-122 441.0 283 76.3
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.6e-121 439.5 310 68.1
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 3.4e-121 439.1 407 58.0
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 5.5e-119 431.8 372 62.6
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 2.1e-118 429.9 385 60.0
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 6.7e-117 424.9 368 60.6
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 8.8e-117 424.5 345 64.1
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 5.7e-116 421.8 376 58.0
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 4.4e-108 395.6 472 49.8
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.4e-100 369.4 273 67.8
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 9.8e-100 367.9 358 55.9
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 3.5e-97 359.4 252 69.8
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 7.2e-95 351.7 328 54.9
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 3.4e-92 342.8 235 73.6
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 1.7e-91 340.5 207 82.1
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 3.1e-90 336.3 370 48.9
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 3.1e-90 336.3 370 48.9
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 6.6e-88 328.6 277 58.8
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 2.0e-84 317.0 279 58.4
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 5.4e-82 308.9 265 58.5
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.0e-48 198.4 216 48.1
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 2.9e-43 180.3 168 50.6
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 7.9e-41 172.2 170 54.1
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 1.3e-40 171.4 170 54.7
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 4.5e-36 156.4 125 64.0
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.6e-25 121.3 152 48.0
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 2.7e-25 120.6 118 50.0
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.8e-24 117.9 85 72.9
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 1.1e-23 115.2 123 48.8
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 7.2e-18 95.9 84 57.1
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.6e-17 94.7 133 44.4
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 5.7e-07 59.7 48 62.5
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 5.7e-07 59.7 48 62.5
Pp3c23_2190 Physcomitrium patens HOM05D004123 ORTHO05D004768 1.3e-06 58.5 55 56.4


User provided reference genes

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