Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 8.1e-188 660.2 326 100.0
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 8.0e-119 431.0 323 67.5
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 1.8e-118 429.9 325 68.6
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 1.8e-115 419.9 324 68.2
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 1.3e-100 370.5 319 60.8
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 8.3e-100 367.9 317 61.5
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 1.9e-99 366.7 313 60.7
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 2.0e-98 363.2 315 60.0
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 7.8e-98 361.3 323 58.5
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 7.8e-98 361.3 323 58.5
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 1.3e-97 360.5 307 60.9
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 1.3e-97 360.5 319 58.9
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 2.3e-97 359.8 318 58.8
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 3.9e-97 359.0 312 60.6
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 1.1e-96 357.5 311 59.8
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 4.3e-96 355.5 309 59.2
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 7.3e-96 354.8 314 60.8
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 9.5e-96 354.4 318 58.2
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 9.5e-96 354.4 305 60.7
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 9.5e-96 354.4 303 61.1
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 1.2e-95 354.0 302 60.6
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 2.1e-95 353.2 309 57.9
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 2.1e-95 353.2 302 59.9
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 2.8e-95 352.8 319 57.4
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 3.6e-95 352.4 299 61.9
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 6.2e-95 351.7 299 61.5
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 8.1e-95 351.3 314 58.0
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 1.1e-94 350.9 304 59.2
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.4e-94 350.5 301 59.5
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 1.8e-94 350.1 314 58.6
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 5.2e-94 348.6 309 59.2
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 8.9e-94 347.8 259 68.7
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 1.2e-93 347.4 301 59.1
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.2e-93 347.4 300 59.3
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 1.2e-93 347.4 310 58.1
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 1.5e-93 347.1 262 67.9
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 1.5e-93 347.1 303 58.4
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 2.0e-93 346.7 307 59.9
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.6e-93 346.3 300 59.3
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 3.4e-93 345.9 266 65.8
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 4.4e-93 345.5 282 62.8
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 1.3e-92 344.0 303 57.4
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 1.7e-92 343.6 299 60.2
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.2e-92 343.2 297 59.9
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 2.2e-92 343.2 311 58.8
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 2.9e-92 342.8 309 56.3
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 3.7e-92 342.4 311 57.9
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 3.7e-92 342.4 301 59.8
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 4.9e-92 342.0 304 58.2
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 6.4e-92 341.7 299 59.2
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 1.9e-91 340.1 303 59.4
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 2.4e-91 339.7 257 67.3
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 3.2e-91 339.3 313 57.8
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 4.1e-91 339.0 304 57.9
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 5.4e-91 338.6 310 57.7
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 5.4e-91 338.6 327 56.9
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 7.1e-91 338.2 350 52.3
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 9.2e-91 337.8 260 66.9
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 2.1e-90 336.7 309 57.9
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 2.1e-90 336.7 259 65.3
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 3.5e-90 335.9 264 64.8
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 3.5e-90 335.9 328 55.5
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 4.6e-90 335.5 259 64.9
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 7.8e-90 334.7 314 57.6
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 7.8e-90 334.7 259 63.3
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 7.8e-90 334.7 304 56.9
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 1.3e-89 334.0 315 56.5
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 1.3e-89 334.0 304 56.9
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 1.7e-89 333.6 318 55.3
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 2.3e-89 333.2 312 57.1
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 3.0e-89 332.8 260 64.6
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 5.1e-89 332.0 304 56.9
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 5.1e-89 332.0 258 65.9
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 6.6e-89 331.6 259 64.5
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 8.6e-89 331.3 259 65.3
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 1.1e-88 330.9 316 55.7
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 3.3e-88 329.3 305 57.0
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 4.3e-88 328.9 304 56.6
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 7.3e-88 328.2 258 63.6
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 2.1e-87 326.6 302 57.6
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 4.7e-87 325.5 249 64.7
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 1.2e-85 320.9 277 59.9
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 1.2e-85 320.9 315 54.0
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 1.7e-84 317.0 313 54.3
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 1.4e-83 313.9 318 53.5
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 3.2e-83 312.8 318 52.2
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 7.1e-83 311.6 283 57.6
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 4.6e-82 308.9 272 58.1
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 6.6e-81 305.1 262 57.3
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 1.1e-80 304.3 315 52.1
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 5.6e-80 302.0 327 52.0
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 9.6e-80 301.2 276 55.8
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 1.4e-78 297.4 276 58.0
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 1.3e-76 290.8 255 60.0
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 1.7e-76 290.4 250 60.4
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 1.4e-75 287.3 311 51.4
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 3.0e-73 279.6 260 57.7
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 2.1e-71 273.5 265 56.6
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 2.4e-70 270.0 256 56.6
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 3.8e-68 262.7 321 46.7
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 8.7e-65 251.5 260 49.6
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 1.5e-64 250.8 374 42.5
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 4.0e-62 242.7 278 47.5
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 2.6e-61 240.0 186 64.5
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.9e-60 236.5 203 60.6
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 1.4e-59 234.2 268 47.4
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 2.1e-58 230.3 262 47.3
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 1.1e-54 218.0 157 68.2
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 3.1e-54 216.5 170 65.3
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 1.1e-51 208.0 277 38.6
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.9e-51 207.2 159 66.7
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.4e-46 190.3 157 61.1
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 4.6e-42 176.0 159 58.5
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 1.1e-38 164.9 178 52.2
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 3.0e-33 146.7 290 35.5
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.2e-31 140.6 164 47.6
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 3.8e-28 129.8 180 45.0
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 4.7e-26 122.9 148 45.9
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 6.1e-26 122.5 120 55.0
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.2e-25 119.4 95 60.0
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 5.7e-24 115.9 212 35.8
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.8e-22 110.9 158 44.3
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.4e-22 110.5 76 67.1
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 5.9e-21 105.9 286 30.8
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 1.9e-19 100.9 162 43.2
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 1.2e-18 98.2 77 61.0
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 6.7e-17 92.4 125 42.4
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 1.5e-16 91.3 126 42.9
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 5.3e-14 82.8 75 56.0
MCO06G261 Micromonas commoda HOM05D005938 ORTHO05D044307 1.3e-07 61.6 150 28.0
Cre02.g083850 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D044307 7.0e-06 55.8 153 30.1


User provided reference genes

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