Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 8.7e-125 450.3 223 100.0
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 8.5e-88 327.4 223 74.4
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 3.2e-87 325.5 223 74.9
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 1.6e-78 296.6 223 67.7
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 5.7e-76 288.1 222 64.9
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 8.3e-75 284.3 228 64.5
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 1.4e-74 283.5 210 67.6
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 2.4e-74 282.7 227 63.9
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 1.6e-73 280.0 229 64.2
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 5.9e-73 278.1 228 64.5
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 1.3e-72 276.9 226 64.6
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 2.9e-72 275.8 221 64.3
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 3.3e-71 272.3 229 65.1
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 3.3e-71 272.3 228 64.0
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 2.1e-70 269.6 225 65.8
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 2.8e-70 269.2 215 65.1
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 4.7e-70 268.5 230 62.2
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 8.0e-70 267.7 226 61.1
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 8.0e-70 267.7 225 64.4
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 4.0e-69 265.4 219 63.5
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 5.2e-69 265.0 224 62.1
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 8.9e-69 264.2 226 61.5
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.5e-68 263.5 232 62.1
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 2.0e-68 263.1 207 63.3
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 3.4e-68 262.3 237 61.2
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 4.4e-68 261.9 227 61.2
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 5.7e-68 261.5 233 58.4
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 5.7e-68 261.5 206 65.0
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.7e-67 260.0 216 63.4
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 1.7e-67 260.0 215 65.1
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 2.2e-67 259.6 227 63.9
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 2.2e-67 259.6 224 62.1
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 4.9e-67 258.5 214 62.1
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 6.4e-67 258.1 219 63.0
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 6.4e-67 258.1 230 61.3
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 1.1e-66 257.3 218 61.9
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 1.4e-66 256.9 226 59.3
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 1.4e-66 256.9 228 63.2
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 3.2e-66 255.8 227 58.1
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 4.1e-66 255.4 219 58.4
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 5.4e-66 255.0 226 60.2
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 7.0e-66 254.6 215 59.5
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 9.2e-66 254.2 180 69.4
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 1.2e-65 253.8 188 63.8
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.2e-65 253.8 228 57.9
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 4.6e-65 251.9 224 59.8
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 5.9e-65 251.5 180 67.8
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 1.3e-64 250.4 181 67.4
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 1.3e-64 250.4 179 67.6
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 2.3e-64 249.6 236 61.0
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 3.9e-64 248.8 227 59.5
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 3.9e-64 248.8 222 58.1
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 5.0e-64 248.4 169 71.0
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 6.6e-64 248.1 246 58.9
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 6.6e-64 248.1 181 65.7
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 8.6e-64 247.7 220 59.1
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 1.1e-63 247.3 224 57.6
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 1.5e-63 246.9 237 56.5
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 1.5e-63 246.9 183 66.7
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 2.5e-63 246.1 196 64.3
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 2.5e-63 246.1 233 56.2
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 3.3e-63 245.7 202 61.9
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 4.3e-63 245.4 214 57.5
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 5.6e-63 245.0 212 60.4
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 1.6e-62 243.4 197 64.5
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 1.6e-62 243.4 225 59.1
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 1.6e-62 243.4 169 69.2
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.1e-62 243.0 169 73.4
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.1e-62 243.0 169 73.4
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 2.8e-62 242.7 197 65.0
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 3.6e-62 242.3 183 67.2
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 6.2e-62 241.5 229 57.2
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 1.0e-61 240.7 180 67.8
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 8.9e-61 237.7 228 57.0
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 8.9e-61 237.7 228 57.0
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 8.9e-61 237.7 214 58.9
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.2e-60 237.3 233 56.7
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 1.5e-60 236.9 176 67.0
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 2.0e-60 236.5 199 63.8
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 2.6e-60 236.1 228 56.6
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 7.5e-60 234.6 216 57.4
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 2.9e-59 232.6 173 68.2
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 3.7e-59 232.3 161 70.8
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 4.1e-58 228.8 149 71.8
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 5.4e-58 228.4 217 57.1
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 9.2e-58 227.6 233 56.2
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 2.7e-57 226.1 186 64.5
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 2.7e-57 226.1 244 54.1
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 4.6e-57 225.3 217 56.7
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 6.0e-57 224.9 216 56.5
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 6.0e-57 224.9 207 58.0
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 7.8e-57 224.6 233 55.4
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 7.3e-55 218.0 229 55.0
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.2e-54 217.2 239 55.2
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 6.2e-54 214.9 147 68.7
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 7.5e-52 208.0 151 65.6
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 3.7e-51 205.7 188 56.9
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 3.7e-51 205.7 126 77.8
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 1.6e-49 200.3 134 69.4
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 1.1e-47 194.1 174 55.7
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.2e-46 190.7 140 71.4
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 1.6e-46 190.3 205 51.2
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 4.7e-46 188.7 148 56.8
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 1.3e-43 180.6 154 63.0
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 6.4e-43 178.3 132 66.7
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 1.1e-42 177.6 156 57.1
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 8.6e-40 167.9 196 51.5
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 1.5e-39 167.2 136 62.5
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 6.2e-38 161.8 94 85.1
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 2.4e-37 159.8 154 55.8
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 2.4e-37 159.8 154 55.8
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 8.9e-37 157.9 134 58.2
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 2.0e-36 156.8 112 62.5
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 6.2e-30 135.2 94 74.5
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 1.2e-28 131.0 129 47.3
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 7.6e-28 128.3 137 48.2
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 7.6e-28 128.3 92 67.4
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 1.4e-26 124.0 129 45.0
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 3.2e-26 122.9 136 50.0
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 3.9e-24 115.9 139 46.0
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 9.0e-21 104.8 96 53.1
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 4.8e-14 82.4 115 33.9
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 1.0e-08 64.7 48 60.4
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 1.1e-07 61.2 168 28.6


User provided reference genes

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