Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 5.1e-70 267.7 142 100.0
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 2.5e-64 248.8 142 86.6
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 4.6e-63 244.6 142 88.0
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 1.0e-62 243.4 142 85.2
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 1.8e-62 242.7 144 90.3
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 1.1e-61 240.0 144 84.7
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 5.7e-61 237.7 144 84.0
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 2.8e-60 235.3 144 86.8
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 3.7e-60 235.0 144 82.6
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 1.4e-59 233.0 142 83.8
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 2.4e-59 232.3 142 80.3
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 3.1e-59 231.9 142 82.4
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 4.1e-59 231.5 143 81.8
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 5.3e-59 231.1 144 86.8
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 5.3e-59 231.1 143 81.1
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 6.9e-59 230.7 144 81.2
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 6.9e-59 230.7 143 82.5
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 9.0e-59 230.3 143 81.1
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 1.2e-58 229.9 145 80.7
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 2.0e-58 229.2 144 85.4
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 2.6e-58 228.8 146 80.1
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 3.4e-58 228.4 144 81.2
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 7.6e-58 227.3 144 84.7
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 1.3e-57 226.5 145 83.4
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 1.3e-57 226.5 145 83.4
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 1.3e-57 226.5 143 82.5
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 1.7e-57 226.1 142 80.3
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 1.7e-57 226.1 142 81.7
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 2.2e-57 225.7 143 79.7
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 2.9e-57 225.3 141 81.6
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 3.8e-57 224.9 143 80.4
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 5.0e-57 224.6 144 80.6
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 6.5e-57 224.2 143 81.1
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 6.5e-57 224.2 144 81.2
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 8.5e-57 223.8 150 76.0
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 8.5e-57 223.8 144 79.2
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 8.5e-57 223.8 143 81.1
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 1.1e-56 223.4 142 78.9
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 1.1e-56 223.4 140 80.7
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 1.1e-56 223.4 144 78.5
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 2.5e-56 222.2 142 77.5
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 3.2e-56 221.9 144 79.2
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 4.2e-56 221.5 147 81.6
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 7.2e-56 220.7 145 79.3
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 7.2e-56 220.7 143 84.6
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 9.3e-56 220.3 142 80.3
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 9.3e-56 220.3 142 80.3
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 9.3e-56 220.3 142 78.9
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 1.6e-55 219.5 142 79.6
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 1.6e-55 219.5 145 81.4
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 1.6e-55 219.5 142 78.2
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 1.6e-55 219.5 143 79.0
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 2.1e-55 219.2 146 76.7
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 2.1e-55 219.2 144 77.1
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 4.6e-55 218.0 152 75.7
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 4.6e-55 218.0 144 77.8
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 4.6e-55 218.0 144 77.8
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 4.6e-55 218.0 144 86.1
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 6.1e-55 217.6 143 78.3
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 7.9e-55 217.2 146 76.0
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 7.9e-55 217.2 131 84.0
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 1.0e-54 216.9 148 82.4
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 1.0e-54 216.9 143 86.0
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 1.8e-54 216.1 143 79.0
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 3.0e-54 215.3 144 75.0
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 3.0e-54 215.3 145 75.2
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 3.0e-54 215.3 145 75.9
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 3.0e-54 215.3 143 78.3
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 5.1e-54 214.5 132 83.3
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 5.1e-54 214.5 145 74.5
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 6.7e-54 214.2 146 80.1
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 6.7e-54 214.2 144 75.0
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 6.7e-54 214.2 142 78.2
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 6.7e-54 214.2 144 77.1
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 8.7e-54 213.8 148 75.0
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 8.7e-54 213.8 148 75.0
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 8.7e-54 213.8 148 75.0
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 8.7e-54 213.8 145 84.1
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 1.1e-53 213.4 147 78.2
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 1.1e-53 213.4 148 73.6
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 1.5e-53 213.0 143 77.6
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 1.5e-53 213.0 165 69.7
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 1.5e-53 213.0 142 80.3
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 1.9e-53 212.6 145 79.3
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.9e-53 212.6 142 77.5
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.9e-53 212.6 145 79.3
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 1.9e-53 212.6 146 72.6
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 2.5e-53 212.2 146 76.0
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 3.3e-53 211.8 146 77.4
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 4.3e-53 211.5 130 80.8
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 4.3e-53 211.5 147 78.9
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 9.7e-53 210.3 142 76.8
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 9.7e-53 210.3 145 76.6
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 9.7e-53 210.3 143 76.2
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.3e-52 209.9 142 76.8
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 1.6e-52 209.5 145 79.3
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 1.6e-52 209.5 147 81.0
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 1.6e-52 209.5 147 81.0
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 1.6e-52 209.5 139 77.7
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 2.8e-52 208.8 140 75.7
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 2.8e-52 208.8 140 77.1
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 2.8e-52 208.8 148 71.6
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 2.8e-52 208.8 145 80.0
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 3.7e-52 208.4 142 77.5
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 3.7e-52 208.4 144 74.3
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 4.8e-52 208.0 142 77.5
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 6.3e-52 207.6 147 80.3
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 2.4e-51 205.7 170 65.9
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 4.1e-51 204.9 111 90.1
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 5.3e-51 204.5 110 90.9
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 6.9e-51 204.1 133 78.2
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 6.9e-51 204.1 142 77.5
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 9.1e-51 203.8 146 75.3
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 9.1e-51 203.8 142 73.9
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 2.6e-50 202.2 220 55.0
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 3.6e-47 191.8 107 86.0
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 3.6e-47 191.8 141 72.3
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 4.6e-47 191.4 116 81.0
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.0e-46 190.3 115 82.6
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 1.8e-46 189.5 143 73.4
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 2.0e-45 186.0 175 60.6
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 4.4e-45 184.9 204 56.9
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 2.9e-41 172.2 108 79.6
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 3.8e-41 171.8 106 82.1
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 5.0e-41 171.4 92 92.4
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 4.2e-40 168.3 91 92.3
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 1.6e-39 166.4 90 91.1
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 6.1e-39 164.5 88 92.0
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 5.2e-38 161.4 109 78.9
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 4.1e-35 151.8 98 82.7
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 3.2e-32 142.1 112 71.4
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 1.2e-31 140.2 108 62.0
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 6.1e-31 137.9 116 61.2
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 6.1e-31 137.9 145 62.1
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 4.5e-26 121.7 112 58.0
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 3.8e-25 118.6 63 95.2
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 1.8e-22 109.8 60 91.7
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 4.8e-20 101.7 89 61.8
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 6.3e-20 101.3 73 65.8
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 8.3e-20 100.9 86 55.8
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 2.1e-15 86.3 113 46.0
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 2.8e-15 85.9 121 43.8
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 2.0e-13 79.7 87 46.0
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 2.2e-12 76.3 63 60.3
RcHm_v2.0_Chr2g0130991 Rosa chinensis HOM05D004802 ORTHO05D005591 5.4e-11 71.6 65 58.5
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 7.0e-11 71.2 48 75.0
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 1.2e-10 70.5 59 61.0
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 1.3e-09 67.0 35 91.4
Cfa024847 Carpinus fangiana HOM05D004802 ORTHO05D005591 5.6e-08 61.6 80 45.0
BcaC02g11004 Brassica carinata HOM05D004802 ORTHO05D005591 2.1e-07 59.7 43 72.1
C04p22280 Brassica napus HOM05D004802 ORTHO05D020149 2.1e-07 59.7 43 72.1
PRCOL_00002926 Prasinoderma coloniale HOM05D004802 ORTHO05D005591 8.0e-07 57.8 111 36.9
BolC3t13075H Brassica oleracea HOM05D004802 ORTHO05D005591 6.8e-06 54.7 29 82.8


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