Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G31836 Striga asiatica HOM05D001111 ORTHO05D000939 6.8e-87 323.9 160 100.0
SGA_v2.0_scaffold7G04133 Striga asiatica HOM05D001111 ORTHO05D000939 3.4e-38 162.2 122 68.9
SalBow5G0542 Salvia bowleyana HOM05D001111 ORTHO05D000939 7.6e-22 107.8 127 52.8
SalBow5G1950 Salvia bowleyana HOM05D001111 ORTHO05D000939 7.6e-22 107.8 127 52.8
Migut.I00012 Erythranthe guttata HOM05D001111 ORTHO05D000939 6.4e-21 104.8 141 48.2
MSTRG.11451 Avicennia marina HOM05D001111 ORTHO05D000939 7.1e-20 101.3 110 52.7
MSTRG.4373 Avicennia marina HOM05D001111 ORTHO05D000939 3.3e-17 92.4 129 46.5
SGA_v2.0_scaffold90G27938 Striga asiatica HOM05D001111 ORTHO05D000939 3.3e-17 92.4 120 50.0
Oeu022162.1 Olea europaea HOM05D001111 ORTHO05D000939 1.3e-16 90.5 139 41.0
Oeu060136.1 Olea europaea HOM05D001111 ORTHO05D000939 6.2e-16 88.2 114 44.7
Migut.D01930 Erythranthe guttata HOM05D001111 ORTHO05D000939 1.8e-15 86.7 129 45.0
SGA_v2.0_scaffold25G10842 Striga asiatica HOM05D001111 ORTHO05D000939 3.1e-15 85.9 133 42.1
MSTRG.23129 Avicennia marina HOM05D001111 ORTHO05D000939 9.0e-15 84.3 149 39.6
Duzib205G1255 Durio zibethinus HOM05D001111 ORTHO05D000939 5.8e-14 81.6 107 47.7
Duzib068G0287 Durio zibethinus HOM05D001111 ORTHO05D000939 8.4e-13 77.8 117 43.6
Ah.02g110500 Amaranthus hybridus HOM05D001111 ORTHO05D000939 1.1e-12 77.4 123 38.2
Thecc.03G012600 Theobroma cacao HOM05D001111 ORTHO05D000939 1.4e-12 77.0 122 44.3
Manes.06G104800 Manihot esculenta HOM05D001111 ORTHO05D000939 2.5e-12 76.3 119 45.4
Hma1.2p1_0176F.1_g077400 Hydrangea macrophylla HOM05D001111 ORTHO05D000939 3.2e-12 75.9 136 37.5
SalBow2G0497 Salvia bowleyana HOM05D001111 ORTHO05D000939 3.2e-12 75.9 128 39.8
Cfa019132 Carpinus fangiana HOM05D001111 ORTHO05D000939 5.5e-12 75.1 115 42.6
TWI31G0459 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 9.3e-12 74.3 110 42.7
Haze_07471 Corylus avellana HOM05D001111 ORTHO05D000939 1.6e-11 73.6 115 39.1
Dinv20655 Davidia involucrata HOM05D001111 ORTHO05D000939 2.7e-11 72.8 133 35.3
Cc04_g14080 Coffea canephora HOM05D001111 ORTHO05D000939 3.5e-11 72.4 117 45.3
COL.COLO4_30037 Corchorus olitorius HOM05D001111 ORTHO05D000939 3.5e-11 72.4 120 42.5
Dinv02893 Davidia involucrata HOM05D001111 ORTHO05D000939 3.5e-11 72.4 116 39.7
Actinidia33068 Actinidia chinensis HOM05D001111 ORTHO05D000939 7.9e-11 71.2 119 37.0
Eucgr.B00315 Eucalyptus grandis HOM05D001111 ORTHO05D000939 1.3e-10 70.5 133 39.1
CiPaw.05G151600 Carya illinoinensis HOM05D001111 ORTHO05D000939 1.8e-10 70.1 121 36.4
CiPaw.11G026300 Carya illinoinensis HOM05D001111 ORTHO05D000939 2.3e-10 69.7 130 38.5
FAN04G3199 Fragaria x ananassa HOM05D001111 ORTHO05D000939 2.3e-10 69.7 121 46.3
Manes.14G065800 Manihot esculenta HOM05D001111 ORTHO05D000939 2.3e-10 69.7 120 44.2
Potri.015G076400 Populus trichocarpa HOM05D001111 ORTHO05D000939 2.3e-10 69.7 130 40.8
Solyc03g114350.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 2.3e-10 69.7 133 33.8
Cpa.g.sc76.61 Carica papaya HOM05D001111 ORTHO05D000939 3.9e-10 68.9 115 42.6
FAN08G1819 Fragaria x ananassa HOM05D001111 ORTHO05D000939 3.9e-10 68.9 122 45.1
MBI16_g32208_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 5.1e-10 68.6 116 36.2
Potri.012G081000 Populus trichocarpa HOM05D001111 ORTHO05D000939 5.1e-10 68.6 112 40.2
Lj9P449T21 Lonicera japonica HOM05D001111 ORTHO05D000939 8.7e-10 67.8 109 39.4
TAR629G2362 Trochodendron aralioides HOM05D001111 ORTHO05D000939 8.7e-10 67.8 119 39.5
RcHm_v2.0_Chr7g0193551 Rosa chinensis HOM05D001111 ORTHO05D000939 1.1e-09 67.4 125 43.2
MD14G1180400 Malus domestica HOM05D001111 ORTHO05D000939 1.5e-09 67.0 121 39.7
Prupe.1G253100 Prunus persica HOM05D001111 ORTHO05D000939 1.5e-09 67.0 134 38.1
TWI39G0739 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 1.9e-09 66.6 110 40.0
TWI23G0219 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 4.3e-09 65.5 110 40.0
MELO3C002262.2 Cucumis melo HOM05D001111 ORTHO05D000939 5.7e-09 65.1 127 37.8
ClCG01G013130 Citrullus lanatus HOM05D001111 ORTHO05D000939 9.7e-09 64.3 127 38.6
CsaV3_1G008460 Cucumis sativus L. HOM05D001111 ORTHO05D000939 9.7e-09 64.3 144 38.2
Oeu040830.1 Olea europaea HOM05D001111 ORTHO05D000939 9.7e-09 64.3 117 42.7
Oeu040831.1 Olea europaea HOM05D001111 ORTHO05D000939 9.7e-09 64.3 117 42.7
CSS0041124 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 1.3e-08 63.9 118 35.6
FAN13G1071 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.3e-08 63.9 120 44.2
Prupe.5G173800 Prunus persica HOM05D001111 ORTHO05D000939 1.3e-08 63.9 141 34.8
Sopen03g033450 Solanum pennellii HOM05D001111 ORTHO05D000939 1.3e-08 63.9 133 32.3
PGSC0003DMG400024504 Solanum tuberosum HOM05D001111 ORTHO05D000939 1.6e-08 63.5 133 31.6
Nn4g22768 Nelumbo nucifera HOM05D001111 ORTHO05D000939 2.2e-08 63.2 118 35.6
CAN.G781.10 Capsicum annuum HOM05D001111 ORTHO05D000939 3.7e-08 62.4 117 39.3
FvH4_5g05310 Fragaria vesca HOM05D001111 ORTHO05D000939 3.7e-08 62.4 125 43.2
FAN18G1119 Fragaria x ananassa HOM05D001111 ORTHO05D000939 3.7e-08 62.4 125 43.2
MD13G1092700 Malus domestica HOM05D001111 ORTHO05D000939 3.7e-08 62.4 151 32.5
MD16G1093500 Malus domestica HOM05D001111 ORTHO05D000939 3.7e-08 62.4 119 34.5
PGSC0003DMG400045223 Solanum tuberosum HOM05D001111 ORTHO05D000939 3.7e-08 62.4 142 33.8
EL10Ac5g10747 Beta vulgaris HOM05D001111 ORTHO05D000939 4.8e-08 62.0 127 33.9
FAN18G2882 Fragaria x ananassa HOM05D001111 ORTHO05D000939 4.8e-08 62.0 126 40.5
CiPaw.06G071600 Carya illinoinensis HOM05D001111 ORTHO05D000939 6.3e-08 61.6 147 33.3
Rhsim08G0172000 Rhododendron simsii HOM05D001111 ORTHO05D000939 1.4e-07 60.5 141 37.6
Glyma.04G183300 Glycine max HOM05D001111 ORTHO05D000939 1.8e-07 60.1 105 36.2
Sc04g0001810 Simmondsia chinensis HOM05D001111 ORTHO05D000939 1.8e-07 60.1 160 32.5
Aqoxy3G02945 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 2.4e-07 59.7 162 33.3
Nitab4.5_0007719g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.4e-07 59.7 150 33.3
TAR371G1086 Trochodendron aralioides HOM05D001111 ORTHO05D000939 2.4e-07 59.7 119 37.0
Glyma.06G182500 Glycine max HOM05D001111 ORTHO05D000939 4.1e-07 58.9 102 37.3
Nitab4.5_0001017g0090 Nicotiana tabacum HOM05D001111 ORTHO05D000939 4.1e-07 58.9 127 39.4
Atru.chr9.2477 Acer truncatum HOM05D001111 ORTHO05D000939 5.3e-07 58.5 122 37.7
MELO3C026293.2 Cucumis melo HOM05D001111 ORTHO05D000939 5.3e-07 58.5 114 38.6
Medtr3g077890 Medicago truncatula HOM05D001111 ORTHO05D000939 5.3e-07 58.5 109 38.5
Nitab4.5_0009783g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 5.3e-07 58.5 129 31.8
Sed0020184 Sechium edule HOM05D001111 ORTHO05D000939 5.3e-07 58.5 119 34.5
Phvul.009G178600 Phaseolus vulgaris HOM05D001111 ORTHO05D000939 9.0e-07 57.8 101 38.6
Sed0001479 Sechium edule HOM05D001111 ORTHO05D000939 9.0e-07 57.8 116 39.7
Sed0027867 Sechium edule HOM05D001111 ORTHO05D000939 1.2e-06 57.4 126 34.9
Ciclev10021025m.g Citrus clementina HOM05D001111 ORTHO05D000939 1.5e-06 57.0 122 34.4
CsaV3_3G025060 Cucumis sativus L. HOM05D001111 ORTHO05D000939 2.0e-06 56.6 44 54.5
CsaV3_1G001490 Cucumis sativus L. HOM05D001111 ORTHO05D000939 2.6e-06 56.2 114 35.1
MD09G1032200 Malus domestica HOM05D001111 ORTHO05D000939 2.6e-06 56.2 107 38.3
CANSAT64G1643 Cannabis sativa HOM05D001111 ORTHO05D000939 3.4e-06 55.8 130 36.2
Dinv35071 Davidia involucrata HOM05D005823 ORTHO05D007536 3.4e-06 55.8 130 31.5
Sabra12G0057900 Salix brachista HOM05D001111 ORTHO05D000939 3.4e-06 55.8 121 38.0
A02p16510 Brassica napus HOM05D001111 ORTHO05D000939 4.5e-06 55.5 94 40.4
BraA02t06709Z Brassica rapa HOM05D001111 ORTHO05D000939 4.5e-06 55.5 94 40.4
ClCG06G017020 Citrullus lanatus HOM05D001111 ORTHO05D000939 5.9e-06 55.1 126 36.5
Dinv00507 Davidia involucrata HOM05D001111 ORTHO05D000939 5.9e-06 55.1 130 31.5
DCAR_016484 Daucus carota HOM05D001111 ORTHO05D000939 7.7e-06 54.7 106 35.8
Sabra15G0101500 Salix brachista HOM05D001111 ORTHO05D000939 7.7e-06 54.7 119 37.0


User provided reference genes

Program Settings