Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G31816 Striga asiatica HOM05D007721 ORTHO05D009811 6.5e-117 424.1 215 100.0
SGA_v2.0_scaffold7G04151 Striga asiatica HOM05D000252 ORTHO05D000307 6.9e-18 95.1 110 50.0
SalBow6G6016 Salvia bowleyana HOM05D007721 ORTHO05D009811 2.4e-15 86.7 69 62.3
SalBow6G6561 Salvia bowleyana HOM05D007721 ORTHO05D009811 5.6e-12 75.5 55 67.3
Migut.D01985 Erythranthe guttata HOM05D007721 ORTHO05D009811 8.1e-11 71.6 55 63.6
GSVIVG01031536001 Vitis vinifera HOM05D007721 ORTHO05D009811 2.4e-10 70.1 49 71.4
vmacro04125 Vaccinium macrocarpon HOM05D007721 ORTHO05D009811 2.9e-08 63.2 48 60.4
CSS0018729 Camellia sinensis var. sinensis HOM05D007721 ORTHO05D009811 5.5e-07 58.9 49 55.1
ECA236G4835 Erigeron canadensis HOM05D007721 ORTHO05D009811 5.5e-07 58.9 49 61.2
HanXRQChr04g0118971 Helianthus annuus HOM05D007721 ORTHO05D009811 7.1e-07 58.5 49 59.2
Hma1.2p1_0591F.1_g185200 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 7.1e-07 58.5 48 60.4
Prupe.1G174200 Prunus persica HOM05D007721 ORTHO05D009811 7.1e-07 58.5 46 54.3
RcHm_v2.0_Chr4g0411561 Rosa chinensis HOM05D007721 ORTHO05D009811 9.3e-07 58.2 41 65.9
MD04G1023900 Malus domestica HOM05D007721 ORTHO05D009811 2.1e-06 57.0 44 59.1
Cc01_g05050 Coffea canephora HOM05D007721 ORTHO05D009811 2.7e-06 56.6 48 58.3
Hma1.2p1_0055F.1_g031440 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 2.7e-06 56.6 44 61.4
Manes.06G162100 Manihot esculenta HOM05D007721 ORTHO05D009811 2.7e-06 56.6 77 44.2
unitig_746.g26884 Utricularia gibba HOM05D007721 ORTHO05D009811 2.7e-06 56.6 63 46.0
TAR623G1786 Trochodendron aralioides HOM05D007721 ORTHO05D009811 3.5e-06 56.2 42 64.3
Lj3g0008015 Lotus japonicus HOM05D007721 ORTHO05D009811 4.6e-06 55.8 47 53.2
TWI34G0772 Tripterygium wilfordii HOM05D007721 ORTHO05D009811 4.6e-06 55.8 42 59.5
Ciclev10017339m.g Citrus clementina HOM05D007721 ORTHO05D009811 6.0e-06 55.5 49 53.1
ECA248G3328 Erigeron canadensis HOM05D000152 ORTHO05D001046 6.0e-06 55.5 55 54.5
CiPaw.14G116700 Carya illinoinensis HOM05D007721 ORTHO05D009811 7.9e-06 55.1 44 54.5
QL01p004062 Quercus lobata HOM05D007721 ORTHO05D009811 7.9e-06 55.1 40 62.5


User provided reference genes

Program Settings