Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G31809 Striga asiatica HOM05D008921 ORTHO05D010506 1.2e-67 259.6 123 100.0
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 7.4e-17 90.9 105 45.7
Peaxi162Scf00801g00022 Petunia axillaris HOM05D012681 ORTHO05D010506 1.1e-15 87.0 105 43.8
Nitab4.5_0001566g0030 Nicotiana tabacum HOM05D012681 ORTHO05D010506 3.4e-14 82.0 106 43.4
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 1.3e-13 80.1 116 40.5
Nitab4.5_0000025g0320 Nicotiana tabacum HOM05D012681 ORTHO05D010506 1.3e-13 80.1 101 44.6
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 2.2e-13 79.3 124 39.5
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 6.5e-13 77.8 109 36.7
Migut.D02001 Erythranthe guttata HOM05D024513 ORTHO05D010506 4.2e-12 75.1 121 39.7
Migut.D02003 Erythranthe guttata HOM05D024513 ORTHO05D010506 9.4e-12 73.9 122 38.5
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 1.6e-11 73.2 121 34.7
Nitab4.5_0001793g0040 Nicotiana tabacum HOM05D012681 ORTHO05D010506 4.7e-11 71.6 107 40.2
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 4.7e-11 71.6 125 35.2
Peaxi162Scf00089g00137 Petunia axillaris HOM05D012681 ORTHO05D010506 1.0e-10 70.5 106 35.8
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 2.3e-10 69.3 134 36.6
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 3.9e-10 68.6 111 36.9
MSTRG.9692 Avicennia marina HOM05D024513 ORTHO05D010506 5.1e-10 68.2 128 35.2
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 5.1e-10 68.2 116 32.8
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 6.7e-10 67.8 121 37.2
MSTRG.11495 Avicennia marina HOM05D024513 ORTHO05D017486 1.1e-09 67.0 134 32.8
COL.COLO4_36759 Corchorus olitorius HOM05D008921 ORTHO05D010506 1.5e-09 66.6 121 33.9
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 2.0e-09 66.2 101 36.6
Rhsim08G0177800 Rhododendron simsii HOM05D008921 ORTHO05D010506 2.6e-09 65.9 104 38.5
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 3.3e-09 65.5 116 31.9
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 3.3e-09 65.5 117 34.2
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 5.7e-09 64.7 105 36.2
Sopen03g031300 Solanum pennellii HOM05D016190 ORTHO05D017486 2.2e-08 62.8 118 36.4
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 2.8e-08 62.4 123 33.3
Nitab4.5_0010452g0020 Nicotiana tabacum HOM05D016190 ORTHO05D017486 4.8e-08 61.6 118 34.7
Nitab4.5_0001793g0030 Nicotiana tabacum HOM05D016190 ORTHO05D017486 6.3e-08 61.2 118 34.7
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 8.2e-08 60.8 114 35.1
PGSC0003DMG400018125 Solanum tuberosum HOM05D016190 ORTHO05D017486 8.2e-08 60.8 121 38.0
Aqoxy5G03744 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 1.4e-07 60.1 109 33.9
Solyc03g112200.1 Solanum lycopersicum HOM05D016190 ORTHO05D017486 1.8e-07 59.7 118 35.6
Migut.O00158 Erythranthe guttata HOM05D024513 ORTHO05D010506 2.0e-06 56.2 122 33.6
Ciclev10022809m.g Citrus clementina HOM05D008921 ORTHO05D010506 5.9e-06 54.7 100 34.0
Eucgr.B00219 Eucalyptus grandis HOM05D008921 ORTHO05D010506 5.9e-06 54.7 126 23.8


User provided reference genes

Program Settings