Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 3.2e-197 691.4 320 100.0
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 9.5e-157 557.0 317 79.5
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 2.6e-154 548.9 318 76.4
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 5.4e-152 541.2 317 76.7
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 4.6e-151 538.1 317 76.0
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 3.0e-150 535.4 317 76.7
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.0e-150 535.4 318 73.9
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 1.1e-149 533.5 319 74.0
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 5.6e-149 531.2 316 75.3
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 7.3e-149 530.8 317 75.1
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.6e-148 529.6 317 74.4
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 1.8e-147 526.2 320 74.4
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.8e-147 526.2 317 74.8
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.8e-147 526.2 321 73.5
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 4.0e-147 525.0 318 74.5
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 6.8e-147 524.2 311 73.6
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 1.5e-146 523.1 318 72.6
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.5e-146 523.1 317 74.1
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 1.3e-145 520.0 317 73.8
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 2.2e-145 519.2 317 73.2
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 3.7e-145 518.5 320 72.5
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 4.9e-145 518.1 319 74.9
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 1.9e-144 516.2 317 72.9
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 5.4e-144 514.6 318 72.6
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 1.2e-143 513.5 320 71.9
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 1.6e-143 513.1 320 70.6
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 1.6e-143 513.1 320 71.6
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 2.7e-143 512.3 317 72.2
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 3.5e-143 511.9 320 72.2
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.6e-143 511.5 317 73.2
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.7e-142 509.6 311 74.0
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 1.7e-142 509.6 320 71.6
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 1.7e-142 509.6 321 72.0
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 3.0e-142 508.8 317 71.6
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 3.0e-142 508.8 318 70.8
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 5.1e-142 508.1 320 72.2
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 1.5e-141 506.5 321 71.7
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 3.3e-141 505.4 320 70.9
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.3e-141 505.4 295 74.9
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 2.8e-140 502.3 318 72.0
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 3.6e-140 501.9 320 70.6
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 3.6e-140 501.9 320 70.9
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.7e-140 501.5 317 71.9
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 1.8e-139 499.6 314 70.1
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 3.1e-139 498.8 314 71.0
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 4.0e-139 498.4 321 70.4
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 5.2e-139 498.0 318 70.8
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 5.2e-139 498.0 317 71.6
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 5.2e-139 498.0 317 72.6
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 5.2e-139 498.0 318 70.8
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.2e-138 496.9 318 70.8
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 2.6e-138 495.7 321 70.7
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 3.4e-138 495.4 319 70.5
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 3.4e-138 495.4 318 71.1
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 4.4e-138 495.0 319 70.2
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 4.4e-138 495.0 318 70.8
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 5.8e-138 494.6 322 70.2
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 7.6e-138 494.2 319 68.7
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 7.6e-138 494.2 308 73.4
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 9.9e-138 493.8 313 70.3
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 1.3e-137 493.4 321 69.8
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.3e-137 493.4 320 70.0
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.2e-137 492.7 305 72.8
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 2.2e-137 492.7 318 70.4
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 3.8e-137 491.9 320 70.3
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 3.8e-137 491.9 320 70.3
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 3.8e-137 491.9 315 70.2
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 4.9e-137 491.5 320 70.0
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 4.9e-137 491.5 305 72.8
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 8.4e-137 490.7 319 68.7
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 8.4e-137 490.7 305 73.1
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.1e-136 490.3 321 69.5
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.9e-136 489.6 320 70.0
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 1.9e-136 489.6 319 69.0
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 1.9e-136 489.6 307 72.0
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 3.2e-136 488.8 318 70.4
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 4.1e-136 488.4 318 69.2
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 5.4e-136 488.0 317 69.7
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 7.1e-136 487.6 318 68.2
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 7.1e-136 487.6 317 70.3
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 7.1e-136 487.6 324 69.1
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 1.2e-135 486.9 313 69.6
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.2e-135 486.9 308 71.1
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 1.6e-135 486.5 319 68.7
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 4.6e-135 485.0 313 68.7
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 6.0e-135 484.6 313 69.3
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 6.0e-135 484.6 308 71.4
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 1.3e-134 483.4 288 76.0
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 1.7e-134 483.0 319 67.4
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 3.0e-134 482.3 321 68.2
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 1.9e-133 479.6 308 69.8
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 2.5e-133 479.2 321 68.2
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 5.6e-133 478.0 313 68.1
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 1.2e-132 476.9 309 70.9
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 1.6e-132 476.5 318 65.7
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.6e-132 476.5 317 68.1
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 2.8e-132 475.7 318 67.6
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 8.1e-132 474.2 314 66.9
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 1.1e-131 473.8 318 67.0
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 6.9e-131 471.1 315 67.6
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 8.9e-131 470.7 293 73.4
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 4.4e-130 468.4 321 67.0
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 9.9e-130 467.2 304 66.1
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.4e-129 464.5 308 69.2
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.2e-128 462.2 321 62.9
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 4.2e-128 461.8 318 65.1
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 5.4e-128 461.5 316 66.1
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.2e-127 460.3 288 73.3
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 4.6e-127 458.4 304 68.1
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 1.3e-126 456.8 304 68.4
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.3e-126 456.8 288 72.6
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 2.3e-126 456.1 304 68.4
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 6.6e-126 454.5 304 68.1
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 6.6e-126 454.5 302 67.2
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 8.7e-126 454.1 316 67.4
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 4.3e-125 451.8 302 65.9
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 4.3e-125 451.8 318 63.2
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 5.6e-125 451.4 302 66.6
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.6e-124 449.9 308 64.6
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 1.6e-124 449.9 302 66.2
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 2.4e-123 446.0 321 65.1
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 3.1e-123 445.7 302 66.6
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 1.5e-122 443.4 302 65.9
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 5.8e-122 441.4 302 65.6
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 4.6e-119 431.8 304 65.1
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 1.1e-117 427.2 317 62.1
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 4.3e-117 425.2 321 61.4
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.8e-115 419.9 315 61.0
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 5.3e-115 418.3 301 65.4
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 9.0e-115 417.5 271 67.9
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 1.5e-114 416.8 318 58.8
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.9e-112 409.8 308 59.1
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 7.4e-109 397.9 312 56.7
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.4e-107 393.7 311 59.8
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 4.2e-104 382.1 321 57.9
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 4.2e-104 382.1 321 57.9
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 1.8e-102 376.7 316 54.1
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 4.3e-101 372.1 305 55.4
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.3e-94 350.5 219 69.9
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 5.7e-93 345.1 226 66.4
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 2.8e-92 342.8 307 53.7
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 5.0e-89 332.0 310 50.3
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.9e-80 303.5 269 56.1
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.9e-73 279.6 304 48.0
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 8.8e-70 268.1 181 69.1
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 6.3e-68 261.9 263 51.0
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.5e-48 197.6 129 64.3
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.7e-44 183.0 117 71.8
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.4e-43 181.0 134 64.9
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 4.3e-40 169.5 305 32.5
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 4.0e-38 162.9 307 32.6
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 4.9e-28 129.4 234 33.3
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 4.9e-28 129.4 338 28.1
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.9e-27 127.5 97 60.8
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 8.1e-15 85.5 57 68.4
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 1.2e-13 81.6 75 56.0


User provided reference genes

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