Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold113G31794 Striga asiatica HOM05D014194 ORTHO05D014656 2.1e-106 389.0 193 100.0
SGA_v2.0_scaffold45G17028 Striga asiatica HOM05D014194 ORTHO05D014656 7.0e-46 188.0 98 94.9
SGA_v2.0_scaffold111G31470 Striga asiatica HOM05D014194 ORTHO05D014656 4.2e-35 152.1 79 94.9
SGA_v2.0_scaffold234G43644 Striga asiatica HOM05D014194 ORTHO05D014656 3.4e-32 142.5 80 86.2
SGA_v2.0_scaffold3G01819 Striga asiatica HOM05D011878 ORTHO05D011270 2.5e-19 99.8 170 33.5
SGA_v2.0_scaffold10G05309 Striga asiatica HOM05D011878 ORTHO05D011270 9.5e-19 97.8 216 30.1
SGA_v2.0_scaffold124G33518 Striga asiatica HOM05D000045 ORTHO05D011270 4.0e-17 92.4 179 33.5
CDE05G1292 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 1.5e-11 73.9 185 29.2
SGA_v2.0_scaffold57G20196 Striga asiatica HOM05D011878 ORTHO05D011270 2.1e-10 70.1 176 30.7
MBI16_g13385_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000611 3.6e-10 69.3 128 31.2
Hund04370 Selenicereus undatus HOM05D000045 ORTHO05D000695 8.1e-10 68.2 175 25.1
CDE07G0644 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 1.8e-09 67.0 168 28.6
MBI03_g08367_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D048558 3.1e-09 66.2 159 28.3
Rhsim02G0114200 Rhododendron simsii HOM05D000045 ORTHO05D009425 3.1e-09 66.2 125 29.6
MBI14_g06390_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 1.5e-08 63.9 135 29.6
SGA_v2.0_scaffold177G39432 Striga asiatica HOM05D011878 ORTHO05D011270 2.6e-08 63.2 180 26.7
SGA_v2.0_scaffold8G04271 Striga asiatica HOM05D011878 ORTHO05D011270 2.6e-08 63.2 181 27.1
EL10Ac7g17613 Beta vulgaris HOM05D000045 ORTHO05D004773 3.4e-08 62.8 71 42.3
FvH4_4g08901 Fragaria vesca HOM05D000045 ORTHO05D011407 4.4e-08 62.4 117 30.8
FvH4_5g35621 Fragaria vesca HOM05D000045 ORTHO05D011407 4.4e-08 62.4 117 30.8
EL10Ac1g01868 Beta vulgaris HOM05D000045 ORTHO05D000067 5.8e-08 62.0 71 42.3
EL10Ac7g16467 Beta vulgaris HOM05D000045 ORTHO05D000067 7.6e-08 61.6 124 32.3
Rhsim03G0118100 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.9e-08 61.2 60 50.0
PSO384G0226 Papaver somniferum HOM05D000045 ORTHO05D000067 2.2e-07 60.1 117 32.5
CDE12G0459 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 2.9e-07 59.7 178 28.7
Ciclev10033482m.g Citrus clementina HOM05D000045 ORTHO05D010036 2.9e-07 59.7 154 26.0
Rhsim12G0018100 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.9e-07 59.7 60 46.7
Nitab4.5_0001220g0110 Nicotiana tabacum HOM05D000045 ORTHO05D000067 3.7e-07 59.3 197 22.8
PSO339G2818 Papaver somniferum HOM05D000045 ORTHO05D000067 3.7e-07 59.3 117 32.5
QL06p038669 Quercus lobata HOM05D000045 ORTHO05D000067 4.9e-07 58.9 167 28.1
Oeu064496.1 Olea europaea HOM05D000045 ORTHO05D011270 6.4e-07 58.5 61 47.5
Rhsim04G0102900 Rhododendron simsii HOM05D000045 ORTHO05D010036 6.4e-07 58.5 119 32.8
Rhsim09G0033300 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.4e-07 58.5 125 33.6
SGA_v2.0_scaffold14G06875 Striga asiatica HOM05D011878 ORTHO05D011270 6.4e-07 58.5 66 47.0
COL.COLO4_25082 Corchorus olitorius HOM05D000045 ORTHO05D004773 8.4e-07 58.2 112 33.9
Rhsim09G0077400 Rhododendron simsii HOM05D000045 ORTHO05D010036 8.4e-07 58.2 102 34.3
RcHm_v2.0_Chr6g0251121 Rosa chinensis HOM05D000045 ORTHO05D011574 8.4e-07 58.2 118 29.7
EL10Ac2g03367 Beta vulgaris HOM05D000045 ORTHO05D004773 1.1e-06 57.8 61 44.3
Rhsim03G0080800 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.1e-06 57.8 120 33.3
Rhsim07G0160800 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-06 57.8 120 33.3
CiPaw.09G035500 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.4e-06 57.4 114 36.0
FvH4_2g00731 Fragaria vesca HOM05D000045 ORTHO05D011574 1.4e-06 57.4 116 30.2
Rhsim08G0146600 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.4e-06 57.4 104 33.7
Psat5g221600 Pisum sativum HOM05D000045 ORTHO05D000067 1.9e-06 57.0 98 32.7
Rhsim09G0160500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.9e-06 57.0 104 32.7
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.4e-06 56.6 106 32.1
EL10Ac9g20884 Beta vulgaris HOM05D000045 ORTHO05D004773 2.4e-06 56.6 71 39.4
AUR62033098 Chenopodium quinoa HOM05D009508 ORTHO05D000695 2.4e-06 56.6 175 25.1
Rhsim02G0171700 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.4e-06 56.6 120 30.0
Sabra03G0076500 Salix brachista HOM05D000045 ORTHO05D000067 3.2e-06 56.2 119 29.4
SGA_v2.0_scaffold21G09318 Striga asiatica HOM05D000045 ORTHO05D011270 3.2e-06 56.2 70 41.4
EL10Ac2g02717 Beta vulgaris HOM05D000045 ORTHO05D000067 4.1e-06 55.8 101 23.8
EL10Ac3g06581 Beta vulgaris HOM05D000045 ORTHO05D000067 4.1e-06 55.8 101 23.8
EL10Ac6g13792 Beta vulgaris HOM05D000045 ORTHO05D000067 4.1e-06 55.8 101 23.8
EL10Ac6g14806 Beta vulgaris HOM05D000045 ORTHO05D000067 4.1e-06 55.8 101 22.8
EL10As3g23329 Beta vulgaris HOM05D000045 ORTHO05D000067 4.1e-06 55.8 101 23.8
COL.COLO4_20589 Corchorus olitorius HOM05D000045 ORTHO05D000067 4.1e-06 55.8 112 30.4
FvH4_4g06321 Fragaria vesca HOM05D019783 ORTHO05D022550 4.1e-06 55.8 98 35.7
Peaxi162Scf00175g01033 Petunia axillaris HOM05D000045 ORTHO05D000067 4.1e-06 55.8 200 24.0
QL04p064028 Quercus lobata HOM05D000045 ORTHO05D000067 4.1e-06 55.8 115 31.3
QL07p011111 Quercus lobata HOM05D000045 ORTHO05D000067 4.1e-06 55.8 115 31.3
Rhsim05G0139200 Rhododendron simsii HOM05D000045 ORTHO05D010036 4.1e-06 55.8 120 32.5
Rhsim10G0098100 Rhododendron simsii HOM05D000006 ORTHO05D010036 4.1e-06 55.8 196 26.0
arahy.Tifrunner.gnm1.ann1.B1LYNA Arachis hypogaea HOM05D005194 ORTHO05D003357 5.4e-06 55.5 126 31.7
FvH4_4g29541 Fragaria vesca HOM05D000045 ORTHO05D010036 5.4e-06 55.5 104 26.9
FvH4_6g21931 Fragaria vesca HOM05D000045 ORTHO05D000067 5.4e-06 55.5 98 33.7
SGA_v2.0_scaffold86G26862 Striga asiatica HOM05D000045 ORTHO05D010054 5.4e-06 55.5 175 23.4
Gorai.006G037100 Gossypium raimondii HOM05D000045 ORTHO05D000067 7.1e-06 55.1 55 43.6
Thecc.09G337000 Theobroma cacao HOM05D000045 ORTHO05D000067 7.1e-06 55.1 128 28.9
Ah.01g017640 Amaranthus hybridus HOM05D000045 ORTHO05D000067 9.2e-06 54.7 48 50.0
EL10Ac2g03088 Beta vulgaris HOM05D000045 ORTHO05D010054 9.2e-06 54.7 99 23.2
CANSAT01G1937 Cannabis sativa HOM05D000045 ORTHO05D000067 9.2e-06 54.7 79 35.4
CAN.G543.2 Capsicum annuum HOM05D000045 ORTHO05D000067 9.2e-06 54.7 112 28.6
TPR.G1463 Trifolium pratense HOM05D000045 ORTHO05D000067 9.2e-06 54.7 113 30.1


User provided reference genes

Program Settings