Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold113G31788 Striga asiatica HOM05D053072 ORTHO05D406157 9.0e-57 223.8 151 100.0
SGA_v2.0_scaffold288G47226 Striga asiatica HOM05D053072 ORTHO05D400193 9.1e-25 117.5 113 80.5
SGA_v2.0_scaffold2G00916 Striga asiatica HOM05D000666 ORTHO05D001727 1.1e-17 94.0 63 82.5
GSVIVG01025121001 Vitis vinifera HOM05D000666 ORTHO05D001727 2.2e-07 59.7 59 54.2
Lj3g0000964 Lotus japonicus HOM05D000666 ORTHO05D001727 3.8e-07 58.9 60 55.0
Oeu022267.1 Olea europaea HOM05D000666 ORTHO05D001727 3.8e-07 58.9 59 54.2
MSTRG.17858 Avicennia marina HOM05D000666 ORTHO05D001727 6.5e-07 58.2 59 55.9
Sopen11g030140 Solanum pennellii HOM05D000666 ORTHO05D001727 6.5e-07 58.2 57 56.1
TWI31G1142 Tripterygium wilfordii HOM05D000666 ORTHO05D001727 6.5e-07 58.2 59 55.9
Nitab4.5_0005556g0010 Nicotiana tabacum HOM05D000666 ORTHO05D001727 8.5e-07 57.8 57 54.4
CiPaw.14G077200 Carya illinoinensis HOM05D000666 ORTHO05D001727 1.1e-06 57.4 63 50.8
COL.COLO4_25260 Corchorus olitorius HOM05D000666 ORTHO05D001727 1.5e-06 57.0 52 61.5
SalBow3G2191 Salvia bowleyana HOM05D000666 ORTHO05D001727 1.5e-06 57.0 54 57.4
Atru.chr3.3716 Acer truncatum HOM05D000666 ORTHO05D001727 1.9e-06 56.6 59 55.9
CAN.G552.2 Capsicum annuum HOM05D000666 ORTHO05D001727 2.5e-06 56.2 57 54.4
SalBow1G2503 Salvia bowleyana HOM05D000666 ORTHO05D006547 2.5e-06 56.2 54 55.6
Oeu038949.1 Olea europaea HOM05D000666 ORTHO05D001727 3.2e-06 55.8 63 47.6
Cc01_g11650 Coffea canephora HOM05D000666 ORTHO05D001727 4.2e-06 55.5 59 50.8
Duzib168G0376 Durio zibethinus HOM05D000666 ORTHO05D001727 5.5e-06 55.1 52 61.5
Manes.04G026300 Manihot esculenta HOM05D000666 ORTHO05D001727 5.5e-06 55.1 57 56.1
Nitab4.5_0000888g0210 Nicotiana tabacum HOM05D000666 ORTHO05D001727 5.5e-06 55.1 57 52.6
SalBow1G5181 Salvia bowleyana HOM05D001430 ORTHO05D001959 5.5e-06 55.1 54 55.6
SalBow8G4979 Salvia bowleyana HOM05D000666 ORTHO05D001727 7.2e-06 54.7 58 51.7
Glyma.11G151915 Glycine max HOM05D000666 ORTHO05D001727 9.4e-06 54.3 59 52.5


User provided reference genes

Program Settings