Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 0.0e+00 1195.6 619 100.0
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 1.0e-106 391.7 616 45.1
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 5.8e-102 375.9 687 42.5
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 5.3e-95 352.8 622 43.1
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 1.8e-90 337.8 734 37.2
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 8.7e-74 282.3 693 36.9
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 4.6e-67 260.0 749 32.4
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 2.4e-63 247.7 625 34.7
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 3.4e-62 243.8 714 34.2
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 3.8e-61 240.4 692 34.4
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 4.7e-59 233.4 689 33.2
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 1.5e-57 228.4 747 31.7
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 4.4e-57 226.9 753 31.3
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 4.8e-56 223.4 681 31.0
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.8e-56 223.4 681 31.1
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 8.2e-56 222.6 695 32.5
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 8.2e-56 222.6 681 31.0
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 8.2e-56 222.6 728 32.4
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 1.4e-55 221.9 302 45.7
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.4e-55 221.9 695 32.4
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 5.3e-55 219.9 727 30.7
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 9.1e-55 219.2 765 30.3
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 9.1e-55 219.2 697 31.3
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 2.0e-54 218.0 752 32.3
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 1.7e-53 214.9 684 32.5
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 1.7e-53 214.9 681 30.5
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 1.1e-52 212.2 733 32.6
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.5e-52 211.1 685 30.7
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 5.5e-52 209.9 721 30.5
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 2.7e-51 207.6 728 32.7
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 3.6e-51 207.2 723 29.6
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 6.1e-51 206.5 721 30.2
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 6.1e-51 206.5 752 31.2
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 1.4e-50 205.3 745 30.6
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 3.0e-50 204.1 722 30.7
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 8.8e-50 202.6 697 29.4
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 8.8e-50 202.6 728 30.2
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 2.6e-49 201.1 645 30.7
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 3.3e-49 200.7 724 30.5
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 7.4e-49 199.5 725 29.5
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 1.7e-48 198.4 722 30.7
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 2.2e-48 198.0 763 29.1
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 2.2e-48 198.0 723 30.2
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 6.3e-48 196.4 755 29.7
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 5.9e-46 189.9 681 31.1
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 5.9e-46 189.9 730 30.3
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 1.7e-45 188.3 755 30.7
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.7e-45 188.3 660 31.2
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 2.9e-45 187.6 669 31.2
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 3.8e-45 187.2 567 31.6
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 5.0e-45 186.8 667 31.5
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 2.5e-44 184.5 735 30.9
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 9.4e-44 182.6 605 30.6
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 9.4e-44 182.6 737 27.8
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 1.0e-42 179.1 738 29.8
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 1.2e-41 175.6 740 28.9
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 1.2e-41 175.6 685 31.1
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 1.5e-41 175.3 681 31.3
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 2.0e-41 174.9 594 33.3
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 4.4e-41 173.7 749 30.6
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 5.7e-41 173.3 636 30.7
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 4.8e-40 170.2 655 29.3
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 1.8e-39 168.3 703 29.0
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 1.8e-39 168.3 711 28.3
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 1.2e-38 165.6 657 30.7
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 1.2e-38 165.6 614 29.6
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 2.0e-38 164.9 605 32.2
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 2.7e-38 164.5 638 29.6
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 3.5e-38 164.1 689 29.6
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 5.9e-38 163.3 704 29.8
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 7.7e-38 162.9 700 28.4
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 1.7e-37 161.8 725 29.0
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 3.8e-37 160.6 638 30.6
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 5.0e-37 160.2 696 26.4
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 5.0e-37 160.2 646 28.6
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 6.5e-37 159.8 707 30.3
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 1.5e-36 158.7 704 28.4
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 5.5e-36 156.8 796 25.6
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 5.5e-36 156.8 735 28.2
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 5.5e-36 156.8 717 29.7
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 7.2e-36 156.4 684 29.2
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.6e-35 155.2 644 28.4
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 2.7e-35 154.5 688 28.2
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 2.3e-34 151.4 802 25.9
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 4.0e-34 150.6 722 29.8
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 6.8e-34 149.8 665 28.4
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 8.8e-34 149.4 662 30.2
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 8.8e-34 149.4 646 29.4
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 1.5e-33 148.7 717 28.9
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.6e-33 147.9 687 28.8
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 5.7e-33 146.7 696 29.3
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 7.5e-33 146.4 648 27.8
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 1.3e-32 145.6 792 27.4
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 8.3e-32 142.9 659 27.5
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 3.1e-31 141.0 695 25.8
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 4.1e-31 140.6 664 27.4
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 7.0e-31 139.8 657 27.2
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 9.1e-31 139.4 671 27.3
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 2.0e-30 138.3 712 28.1
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 1.7e-29 135.2 728 27.1
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 3.8e-29 134.0 655 26.9
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 2.5e-28 131.3 631 28.2
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 2.5e-28 131.3 682 27.9
unitig_22.g5225 Utricularia gibba HOM05D003765 ORTHO05D004561 1.2e-27 129.0 557 28.4
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 1.6e-27 128.6 621 27.7
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 1.6e-27 128.6 573 29.0
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 1.6e-27 128.6 686 27.8
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 2.8e-27 127.9 674 27.6
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 2.8e-27 127.9 712 27.4
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 6.8e-26 123.2 617 25.6
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 1.2e-25 122.5 640 27.7
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 2.6e-25 121.3 588 29.9
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 1.3e-24 119.0 606 28.4
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 2.2e-24 118.2 631 26.1
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 1.8e-23 115.2 477 28.9
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 3.1e-23 114.4 636 27.5
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 7.0e-23 113.2 262 34.0
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 2.0e-22 111.7 707 25.9
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 2.0e-22 111.7 639 27.4
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 2.3e-21 108.2 611 24.9
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 3.3e-20 104.4 608 25.3
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 3.3e-20 104.4 703 25.2
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 9.5e-20 102.8 580 25.2
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.2e-19 102.4 654 25.2
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 1.8e-18 98.6 520 27.5
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 5.2e-18 97.1 603 27.5
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 3.4e-17 94.4 235 32.8
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 4.9e-16 90.5 166 35.5
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 8.3e-16 89.7 627 24.6
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 3.2e-15 87.8 283 31.4
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 3.2e-15 87.8 222 36.0
Zm00001eb418620 Zea mays HOM05D003765 ORTHO05D004561 3.2e-15 87.8 164 37.2
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 7.0e-15 86.7 155 38.7
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 5.0e-13 80.5 680 24.1
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.1e-12 79.3 218 31.7
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 2.5e-12 78.2 706 24.2
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 5.6e-12 77.0 612 23.0
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 9.5e-12 76.3 292 28.8
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 2.1e-11 75.1 192 34.9
Sed0026899 Sechium edule HOM05D003765 ORTHO05D004561 2.8e-11 74.7 539 24.5
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 3.6e-11 74.3 292 28.4
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 8.0e-11 73.2 293 29.4
Os04g0106500 Oryza sativa ssp. japonica HOM05D003765 ORTHO05D004561 5.2e-10 70.5 245 30.6
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 2.6e-09 68.2 173 30.6
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 2.6e-09 68.2 228 32.0
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 4.4e-09 67.4 195 31.8
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 4.4e-09 67.4 372 27.7
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 5.8e-09 67.0 276 26.8
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 7.5e-09 66.6 200 31.5
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 9.8e-09 66.2 189 31.2
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 9.8e-09 66.2 247 27.1
HPP92_022139 Vanilla planifolia HOM05D003765 ORTHO05D004561 1.7e-08 65.5 197 29.9
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 4.9e-08 63.9 195 30.3
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 4.9e-08 63.9 195 30.3
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 1.1e-07 62.8 706 23.1
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 1.1e-07 62.8 492 24.4
HPP92_022144 Vanilla planifolia HOM05D003765 ORTHO05D004561 1.4e-07 62.4 197 29.4
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 1.9e-07 62.0 129 36.4
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 2.1e-06 58.5 191 28.8
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.1e-06 58.5 404 25.5
Carub.0007s1558 Capsella rubella HOM05D003765 ORTHO05D004561 2.7e-06 58.2 143 30.8
SEGI_17592 Sequoiadendron giganteum HOM05D003765 ORTHO05D004561 2.7e-06 58.2 144 29.2
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 6.0e-06 57.0 506 25.5


User provided reference genes

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