Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 5.4e-133 477.6 237 100.0
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 9.6e-106 387.1 240 80.4
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 4.9e-102 374.8 241 78.0
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 1.1e-101 373.6 286 69.2
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 2.3e-99 365.9 239 72.4
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 7.4e-98 360.9 236 74.2
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 1.6e-97 359.8 239 76.2
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 4.8e-97 358.2 237 75.1
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 1.4e-96 356.7 240 74.2
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 3.1e-96 355.5 238 71.8
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 3.1e-96 355.5 240 73.8
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.2e-95 353.6 239 74.1
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.5e-95 353.2 239 76.6
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 2.6e-95 352.4 238 73.1
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 3.4e-95 352.1 238 71.0
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 5.9e-95 351.3 238 70.2
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 5.9e-95 351.3 238 72.7
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 5.9e-95 351.3 236 75.4
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 7.7e-95 350.9 243 72.4
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 7.7e-95 350.9 244 70.9
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.0e-94 350.5 240 74.2
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 2.2e-94 349.4 238 71.0
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 2.9e-94 349.0 240 72.5
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 5.0e-94 348.2 238 73.1
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 5.0e-94 348.2 236 72.9
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 1.1e-93 347.1 241 72.2
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.9e-93 346.3 239 72.8
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 1.9e-93 346.3 236 72.5
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.5e-93 344.7 238 71.8
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 7.2e-93 344.4 232 73.3
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 7.2e-93 344.4 236 71.6
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 7.2e-93 344.4 237 71.7
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 1.6e-92 343.2 238 72.7
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.1e-92 342.8 237 71.7
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.6e-92 342.0 242 71.5
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 4.6e-92 341.7 238 72.3
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 7.9e-92 340.9 237 72.2
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 7.9e-92 340.9 235 72.3
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 7.9e-92 340.9 238 71.0
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 1.4e-91 340.1 238 70.6
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 1.4e-91 340.1 238 71.8
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.8e-91 339.7 242 71.1
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 1.8e-91 339.7 233 70.0
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.3e-91 339.3 235 71.1
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 2.3e-91 339.3 236 71.2
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 3.0e-91 339.0 236 71.2
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 5.1e-91 338.2 239 69.9
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 6.7e-91 337.8 242 69.0
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 8.8e-91 337.4 233 69.1
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 1.5e-90 336.7 238 68.9
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 2.0e-90 336.3 236 70.8
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 3.3e-90 335.5 237 70.0
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 3.3e-90 335.5 238 68.9
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 3.3e-90 335.5 235 71.5
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.3e-90 335.1 249 68.3
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 4.3e-90 335.1 233 69.1
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 5.7e-90 334.7 235 69.8
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.3e-89 333.6 238 69.7
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.8e-89 332.4 219 73.5
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 8.2e-89 330.9 240 69.6
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 8.2e-89 330.9 226 69.9
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 1.1e-88 330.5 306 58.2
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 2.4e-88 329.3 236 69.1
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 3.1e-88 328.9 238 68.1
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 3.1e-88 328.9 235 68.9
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 3.1e-88 328.9 237 69.6
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 4.1e-88 328.6 243 69.1
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.2e-87 327.0 219 72.1
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 3.4e-87 325.5 238 67.6
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 4.5e-87 325.1 239 66.5
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.3e-86 323.6 221 71.0
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.3e-86 323.6 239 66.5
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.3e-86 323.6 241 68.9
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.3e-86 323.6 241 68.9
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 2.2e-86 322.8 196 77.6
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 1.1e-85 320.5 237 67.9
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 1.9e-85 319.7 208 71.6
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 3.2e-85 318.9 229 69.0
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.7e-84 315.8 241 67.6
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 4.7e-84 315.1 237 66.7
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 2.3e-83 312.8 199 75.9
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 6.7e-83 311.2 221 67.9
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 6.7e-83 311.2 235 66.4
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 8.8e-83 310.8 236 65.7
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 1.1e-82 310.5 234 65.8
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 2.6e-82 309.3 235 65.5
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 4.4e-82 308.5 237 65.0
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 7.4e-82 307.8 235 66.4
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 2.2e-81 306.2 219 68.5
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 1.1e-80 303.9 234 65.8
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 7.0e-80 301.2 218 66.5
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 2.6e-79 299.3 237 64.6
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 2.6e-79 299.3 237 64.6
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 5.9e-79 298.1 236 64.4
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.3e-78 297.0 236 61.9
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 2.9e-78 295.8 239 63.2
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 2.9e-78 295.8 239 63.2
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 2.9e-78 295.8 196 71.4
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 5.0e-78 295.0 238 62.6
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 2.5e-77 292.7 198 72.2
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.8e-72 276.6 208 65.9
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.1e-69 267.3 196 66.3
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.5e-69 266.9 197 65.5
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 4.2e-69 265.4 215 60.5
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 3.6e-68 262.3 193 66.3
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 1.5e-66 256.9 219 58.0
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 1.3e-65 253.8 212 60.4
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.5e-61 239.6 202 61.4
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.3e-59 233.0 268 54.1
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 2.3e-59 233.0 221 53.4
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 1.7e-57 226.9 212 54.2
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.3e-54 216.5 143 73.4
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 2.9e-54 216.1 235 48.9
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 6.6e-54 214.9 194 57.2
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 4.2e-53 212.2 193 56.0
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 8.0e-52 208.0 141 70.2
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.6e-50 203.0 139 71.9
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 7.8e-31 138.3 187 41.2
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.6e-28 129.4 91 69.2
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 5.2e-27 125.6 201 38.8
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.0e-22 111.3 259 30.5
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 9.6e-21 104.8 219 34.2
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 1.5e-18 97.4 185 36.2
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 3.0e-14 83.2 49 71.4
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 4.8e-12 75.9 61 55.7
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.8e-11 73.9 48 70.8
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 7.1e-08 62.0 34 79.4


User provided reference genes

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