Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 6.1e-94 347.4 172 100.0
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 3.2e-66 255.4 208 66.3
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 2.4e-58 229.2 180 66.7
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 7.4e-31 137.9 193 43.0
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 1.9e-26 123.2 190 41.6
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 2.7e-25 119.4 173 43.4
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 8.7e-24 114.4 133 42.9
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 1.5e-23 113.6 195 36.9
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 1.1e-21 107.5 181 35.4
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 1.4e-18 97.1 192 33.3
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 2.3e-16 89.7 192 31.2
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 1.5e-15 87.0 163 34.4
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 2.0e-15 86.7 175 31.4
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 7.4e-15 84.7 181 30.4
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 9.7e-15 84.3 119 42.9
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 1.7e-14 83.6 188 30.9
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 3.7e-14 82.4 119 42.0
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 6.3e-14 81.6 171 31.0
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 8.2e-14 81.3 184 28.3
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 8.2e-14 81.3 164 31.1
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 1.4e-13 80.5 172 33.1
SGA_v2.0_scaffold6G03233 Striga asiatica HOM05D001567 ORTHO05D001409 1.4e-13 80.5 39 94.9
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 1.8e-13 80.1 196 29.1
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 2.4e-13 79.7 197 29.9
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 3.1e-13 79.3 168 28.6
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 5.3e-13 78.6 195 29.2
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 1.2e-12 77.4 168 31.0
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 1.2e-12 77.4 161 31.1
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 1.5e-12 77.0 175 29.7
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 3.4e-12 75.9 175 30.3
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 4.5e-12 75.5 172 29.7
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 5.9e-12 75.1 181 27.1
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 7.7e-12 74.7 175 29.1
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 8.5e-11 71.2 162 32.7
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.1e-10 70.9 154 29.2
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 1.9e-10 70.1 152 30.9
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.9e-10 70.1 163 31.3
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 1.9e-10 70.1 144 29.9
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 2.5e-10 69.7 208 25.5
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 2.5e-10 69.7 178 29.2
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 3.2e-10 69.3 170 27.6
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 3.2e-10 69.3 208 25.5
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 5.5e-10 68.6 183 25.7
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 9.4e-10 67.8 151 29.1
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 2.7e-09 66.2 172 29.7
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 4.7e-09 65.5 165 27.9
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 1.0e-08 64.3 159 28.9
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 1.0e-08 64.3 166 27.1
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 1.8e-08 63.5 144 29.9
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 3.0e-08 62.8 170 30.6
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 3.0e-08 62.8 145 31.7
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 3.0e-08 62.8 148 29.1
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 3.9e-08 62.4 102 33.3
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 3.9e-08 62.4 158 28.5
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 3.9e-08 62.4 153 28.1
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 3.9e-08 62.4 165 29.1
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 6.7e-08 61.6 156 27.6
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 6.7e-08 61.6 148 29.1
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 8.8e-08 61.2 153 26.8
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 8.8e-08 61.2 98 34.7
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 8.8e-08 61.2 149 28.9
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 3.3e-07 59.3 167 27.5
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.3e-06 57.4 119 30.3
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 2.8e-06 56.2 175 24.0
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 3.7e-06 55.8 177 24.9


User provided reference genes

Program Settings