Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 1.4e-259 899.0 453 100.0
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 3.5e-181 638.6 459 71.5
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 4.2e-174 615.1 453 68.7
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 9.6e-171 604.0 444 69.1
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 9.9e-168 594.0 457 65.0
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 3.4e-152 542.3 456 61.2
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 7.4e-147 524.6 460 59.3
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 3.7e-146 522.3 460 59.1
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 9.0e-145 517.7 450 58.2
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 2.1e-141 506.5 450 57.6
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 1.9e-139 500.0 451 56.5
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 3.3e-139 499.2 456 56.1
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 6.3e-138 495.0 455 56.5
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 1.1e-137 494.2 456 55.7
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 6.9e-137 491.5 451 56.5
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 4.2e-134 482.3 450 54.4
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 6.3e-130 468.4 466 51.9
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 1.4e-129 467.2 453 53.0
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 2.9e-127 459.5 455 51.9
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 2.5e-126 456.4 456 51.8
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 2.7e-125 453.0 463 49.2
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 1.4e-124 450.7 466 51.1
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 3.9e-124 449.1 451 52.1
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 4.4e-123 445.7 446 51.6
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 3.7e-122 442.6 457 50.1
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 3.7e-122 442.6 464 51.3
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 6.3e-122 441.8 401 56.4
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 4.1e-121 439.1 455 50.1
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 1.2e-120 437.6 466 49.8
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 1.6e-120 437.2 407 56.8
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 1.0e-119 434.5 456 51.5
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 1.7e-119 433.7 446 50.7
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 2.2e-119 433.3 407 57.0
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 5.0e-119 432.2 450 51.1
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 1.9e-118 430.3 450 49.3
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 3.2e-118 429.5 456 50.4
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 5.5e-118 428.7 456 50.7
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 7.2e-118 428.3 461 49.7
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 9.4e-118 427.9 461 49.9
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 9.4e-118 427.9 467 49.7
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 1.2e-117 427.6 448 51.3
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 1.2e-117 427.6 448 51.3
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 1.2e-117 427.6 448 51.3
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 3.6e-117 426.0 458 50.2
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 3.6e-117 426.0 468 48.1
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 3.6e-117 426.0 471 48.6
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 4.7e-117 425.6 462 48.3
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 8.0e-117 424.9 460 50.9
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 3.0e-116 422.9 448 50.4
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 5.2e-116 422.2 455 49.2
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 8.8e-116 421.4 450 49.6
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 1.2e-115 421.0 457 48.8
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 1.5e-115 420.6 429 52.0
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 2.0e-115 420.2 464 48.9
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 2.0e-115 420.2 444 49.3
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 4.4e-115 419.1 443 50.1
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 4.4e-115 419.1 459 48.8
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 5.7e-115 418.7 443 50.3
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 5.7e-115 418.7 454 50.9
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 9.7e-115 417.9 454 48.5
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 2.2e-114 416.8 452 49.3
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 1.4e-113 414.1 464 47.8
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 1.4e-113 414.1 457 49.7
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 3.1e-113 412.9 453 49.7
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 1.1e-110 404.4 460 46.5
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 1.5e-110 404.1 455 48.1
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 5.5e-110 402.1 455 48.4
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 6.1e-109 398.7 475 46.9
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 1.4e-108 397.5 447 45.2
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 6.8e-108 395.2 457 47.5
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 3.4e-107 392.9 469 45.8
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.2e-106 390.2 457 47.0
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.7e-106 389.4 443 48.1
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 8.3e-106 388.3 435 48.0
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 4.1e-105 386.0 442 47.7
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 2.9e-103 379.8 356 53.4
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 2.1e-101 373.6 422 47.9
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 9.8e-99 364.8 445 45.2
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.1e-97 361.3 421 46.8
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 9.2e-97 358.2 421 46.8
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 7.8e-96 355.1 393 47.6
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 6.6e-95 352.1 388 47.7
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 8.6e-95 351.7 387 48.1
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 1.9e-94 350.5 456 43.2
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.2e-93 347.8 360 49.2
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 6.6e-87 325.5 603 33.8
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 6.8e-76 288.9 254 56.3
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 3.2e-73 280.0 374 43.0
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 1.3e-71 274.6 230 60.0
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 4.7e-69 266.2 322 45.0
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 2.0e-67 260.8 229 57.2
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 9.9e-67 258.5 455 36.5
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 8.7e-63 245.4 319 43.3
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 7.3e-62 242.3 533 31.5
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 9.3e-57 225.3 255 45.5
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 8.7e-55 218.8 308 42.9
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 4.2e-49 199.9 448 32.4
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 5.3e-44 183.0 145 62.1
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 4.5e-43 179.9 474 28.1
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 2.5e-41 174.1 456 32.2
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 3.2e-41 173.7 147 60.5
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 7.1e-41 172.6 511 27.2
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 6.5e-34 149.4 131 59.5
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 5.5e-33 146.4 462 28.4
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 6.1e-32 142.9 205 41.0
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 1.6e-29 134.8 442 28.3
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 8.2e-29 132.5 115 57.4
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 6.9e-28 129.4 246 35.8
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 7.4e-22 109.4 120 47.5
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 1.4e-20 105.1 106 52.8
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 7.9e-16 89.4 96 47.9
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 2.3e-15 87.8 103 50.5
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 9.7e-14 82.4 177 33.3
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 7.7e-11 72.8 121 32.2
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 2.9e-10 70.9 131 31.3
MCO13G538 Micromonas commoda HOM05D006594 ORTHO05D008383 3.0e-07 60.8 478 21.8


User provided reference genes

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