Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold113G31714 Striga asiatica HOM05D017394 ORTHO05D001737 1.4e-93 346.3 175 100.0
SGA_v2.0_scaffold37G14762 Striga asiatica HOM05D017394 ORTHO05D001737 2.5e-87 325.5 175 94.3
SGA_v2.0_scaffold142G35665 Striga asiatica HOM05D017394 ORTHO05D001737 6.3e-78 294.3 173 87.9
SGA_v2.0_scaffold191G40486 Striga asiatica HOM05D017394 ORTHO05D001737 7.0e-45 184.5 175 65.1
SGA_v2.0_scaffold288G47234 Striga asiatica HOM05D017394 ORTHO05D001737 2.3e-40 169.5 182 61.0
SGA_v2.0_scaffold332G48948 Striga asiatica HOM05D017394 ORTHO05D001737 1.2e-31 140.6 163 53.4
SGA_v2.0_scaffold50G18424 Striga asiatica HOM05D017394 ORTHO05D001737 8.3e-30 134.4 112 71.4
SGA_v2.0_scaffold143G35747 Striga asiatica HOM05D017394 ORTHO05D001737 1.1e-29 134.0 110 70.0
unitig_0.g2758 Utricularia gibba HOM05D001878 ORTHO05D001737 1.1e-16 90.9 140 46.4
unitig_748.g7119 Utricularia gibba HOM05D001878 ORTHO05D001737 2.3e-16 89.7 139 45.3
Oeu037430.1 Olea europaea HOM05D001878 ORTHO05D001737 3.1e-16 89.4 149 45.0
Oeu026349.1 Olea europaea HOM05D001878 ORTHO05D001737 4.0e-16 89.0 149 45.6
SalBow5G0976 Salvia bowleyana HOM05D007698 ORTHO05D009663 1.2e-15 87.4 122 45.9
SalBow5G4762 Salvia bowleyana HOM05D007698 ORTHO05D009663 1.2e-15 87.4 122 45.9
MSTRG.4940 Avicennia marina HOM05D001878 ORTHO05D001737 2.0e-15 86.7 141 44.0
Oeu019262.1 Olea europaea HOM05D001878 ORTHO05D001737 7.6e-15 84.7 151 44.4
Cc02_g25370 Coffea canephora HOM05D001878 ORTHO05D001737 2.1e-12 76.6 144 38.9
Lsat_1_v5_gn_4_40001 Lactuca sativa HOM05D001878 ORTHO05D001737 1.7e-11 73.6 148 38.5
Peaxi162Scf00853g00433 Petunia axillaris HOM05D001878 ORTHO05D001737 1.7e-11 73.6 175 35.4
CAN.G756.42 Capsicum annuum HOM05D001878 ORTHO05D001737 2.3e-11 73.2 126 38.9
Nitab4.5_0000563g0150 Nicotiana tabacum HOM05D001878 ORTHO05D001737 2.3e-11 73.2 175 35.4
Migut.N01727 Erythranthe guttata HOM05D001878 ORTHO05D001737 3.9e-11 72.4 96 45.8
Nitab4.5_0011684g0010 Nicotiana tabacum HOM05D001878 ORTHO05D001737 8.6e-11 71.2 135 39.3
COL.COLO4_18392 Corchorus olitorius HOM05D001878 ORTHO05D001737 1.1e-10 70.9 129 40.3
Gohir.D08G160800 Gossypium hirsutum HOM05D001878 ORTHO05D001737 1.1e-10 70.9 138 38.4
Gorai.004G167100 Gossypium raimondii HOM05D001878 ORTHO05D001737 1.1e-10 70.9 138 38.4
SGA_v2.0_scaffold143G35746 Striga asiatica HOM05D056464 ORTHO05D001737 2.5e-10 69.7 45 77.8
Potri.002G139500 Populus trichocarpa HOM05D001878 ORTHO05D001737 3.3e-10 69.3 140 37.9
PGSC0003DMG400001696 Solanum tuberosum HOM05D001878 ORTHO05D001737 3.3e-10 69.3 131 39.7
Potri.014G051200 Populus trichocarpa HOM05D001878 ORTHO05D001737 5.6e-10 68.6 136 39.0
Sopen01g035660 Solanum pennellii HOM05D001878 ORTHO05D001737 5.6e-10 68.6 131 37.4
Sabra14G0036200 Salix brachista HOM05D001878 ORTHO05D001737 9.6e-10 67.8 132 40.9
Sabra14G0038300 Salix brachista HOM05D001878 ORTHO05D001737 9.6e-10 67.8 132 40.9
Gohir.A08G139800 Gossypium hirsutum HOM05D001878 ORTHO05D001737 1.2e-09 67.4 195 31.3
Solyc01g088820.2 Solanum lycopersicum HOM05D001878 ORTHO05D001737 2.1e-09 66.6 116 38.8
Glyma.08G051800 Glycine max HOM05D001878 ORTHO05D001737 3.6e-09 65.9 102 43.1
Lsat_1_v5_gn_1_84200 Lactuca sativa HOM05D001878 ORTHO05D001737 3.6e-09 65.9 157 35.7
Duzib133G0474 Durio zibethinus HOM05D001878 ORTHO05D001737 4.7e-09 65.5 111 41.4
Glyma.07G254502 Glycine max HOM05D001878 ORTHO05D001737 4.7e-09 65.5 132 38.6
DCAR_029489 Daucus carota HOM05D001878 ORTHO05D001737 6.2e-09 65.1 101 39.6
Thecc.01G400100 Theobroma cacao HOM05D001878 ORTHO05D001737 6.2e-09 65.1 111 41.4
TWI14G1354 Tripterygium wilfordii HOM05D001878 ORTHO05D001737 6.2e-09 65.1 150 36.0
TWI59G0138 Tripterygium wilfordii HOM05D001878 ORTHO05D001737 6.2e-09 65.1 153 35.3
Phvul.008G049300 Phaseolus vulgaris HOM05D001878 ORTHO05D001737 8.1e-09 64.7 139 35.3
Cpa.g.sc41.83 Carica papaya HOM05D001878 ORTHO05D001737 1.1e-08 64.3 148 36.5
Phvul.003G097500 Phaseolus vulgaris HOM05D001878 ORTHO05D001737 1.1e-08 64.3 102 42.2
VMungo1215G1720 Vigna mungo HOM05D001878 ORTHO05D001737 1.1e-08 64.3 102 42.2
Glyma.18G248000 Glycine max HOM05D001878 ORTHO05D001737 1.4e-08 63.9 138 37.0
Rhsim01G0141600 Rhododendron simsii HOM05D001878 ORTHO05D001737 1.4e-08 63.9 125 36.0
VMungo1383G0933 Vigna mungo HOM05D001878 ORTHO05D001737 1.8e-08 63.5 139 35.3
Glyma.09G245300 Glycine max HOM05D001878 ORTHO05D001737 2.4e-08 63.2 148 33.8
Psat3g099720 Pisum sativum HOM05D001878 ORTHO05D001737 3.1e-08 62.8 137 38.0
Psat4g031080 Pisum sativum HOM05D001878 ORTHO05D001737 3.1e-08 62.8 135 37.0
Ca_21569_v3 Cicer arietinum L. HOM05D001878 ORTHO05D001737 4.0e-08 62.4 102 41.2
Lsat_1_v5_gn_1_84280 Lactuca sativa HOM05D001878 ORTHO05D001737 4.0e-08 62.4 155 33.5
PGR042G1541 Punica granatum HOM05D001878 ORTHO05D001737 4.0e-08 62.4 141 39.0
CSS0031983 Camellia sinensis var. sinensis HOM05D001878 ORTHO05D001737 5.2e-08 62.0 105 37.1
RcHm_v2.0_Chr7g0205651 Rosa chinensis HOM05D001878 ORTHO05D001737 5.2e-08 62.0 155 36.1
Cfa011046 Carpinus fangiana HOM05D001878 ORTHO05D001737 6.8e-08 61.6 111 38.7
Haze_02877 Corylus avellana HOM05D001878 ORTHO05D001737 6.8e-08 61.6 111 38.7
Lalb_Chr13g0290701 Lupinus albus HOM05D001878 ORTHO05D001737 6.8e-08 61.6 151 35.1
Atru.chr5.102 Acer truncatum HOM05D001878 ORTHO05D001737 8.9e-08 61.2 184 31.5
CiPaw.13G024400 Carya illinoinensis HOM05D001878 ORTHO05D001737 8.9e-08 61.2 120 38.3
Ciclev10020863m.g Citrus clementina HOM05D001878 ORTHO05D001737 8.9e-08 61.2 102 40.2
CiPaw.14G018500 Carya illinoinensis HOM05D001878 ORTHO05D001737 1.2e-07 60.8 127 37.8
Sp4g26780 Schrenkiella parvula HOM05D001878 ORTHO05D001737 1.2e-07 60.8 118 38.1
CANSAT25G3641 Cannabis sativa HOM05D001878 ORTHO05D001737 1.5e-07 60.5 115 40.9
Duzib268G0102 Durio zibethinus HOM05D001878 ORTHO05D001737 1.5e-07 60.5 101 41.6
Manes.05G056800 Manihot esculenta HOM05D001878 ORTHO05D001737 1.5e-07 60.5 118 39.8
QL04p028592 Quercus lobata HOM05D001878 ORTHO05D001737 2.0e-07 60.1 106 39.6
QL04p028713 Quercus lobata HOM05D001878 ORTHO05D001737 2.0e-07 60.1 106 39.6
Aa31LG1G26270 Aethionema arabicum HOM05D001878 ORTHO05D001737 3.4e-07 59.3 136 35.3
MD07G1097300 Malus domestica HOM05D001878 ORTHO05D001737 4.4e-07 58.9 151 33.8
Ah.01g019780 Amaranthus hybridus HOM05D001878 ORTHO05D001737 5.8e-07 58.5 118 35.6
Lj1g0024989 Lotus japonicus HOM05D001878 ORTHO05D001737 9.9e-07 57.8 134 35.1
TPR.G28130 Trifolium pratense HOM05D001878 ORTHO05D001737 9.9e-07 57.8 114 36.0
RcHm_v2.0_Chr1g0345291 Rosa chinensis HOM05D001878 ORTHO05D001737 1.3e-06 57.4 100 39.0
MD02G1219900 Malus domestica HOM05D001878 ORTHO05D001737 1.7e-06 57.0 102 37.3
BcaC02g12281 Brassica carinata HOM05D001878 ORTHO05D001737 3.8e-06 55.8 136 33.8
C04p05690 Brassica napus HOM05D001878 ORTHO05D001737 3.8e-06 55.8 136 33.8
Ca_08044_v3 Cicer arietinum L. HOM05D001878 ORTHO05D001737 3.8e-06 55.8 137 35.0
HanXRQChr01g0017711 Helianthus annuus HOM05D001878 ORTHO05D001737 3.8e-06 55.8 105 37.1
Lj4g0024312 Lotus japonicus HOM05D001878 ORTHO05D001737 3.8e-06 55.8 136 35.3
Lalb_Chr07g0177461 Lupinus albus HOM05D001878 ORTHO05D001737 3.8e-06 55.8 107 38.3
SGA_v2.0_scaffold50G18423 Striga asiatica HOM05D056464 ORTHO05D001737 3.8e-06 55.8 54 64.8
Dinv43604 Davidia involucrata HOM05D001878 ORTHO05D001737 4.9e-06 55.5 99 36.4
Nn1g00752 Nelumbo nucifera HOM05D001878 ORTHO05D001737 4.9e-06 55.5 102 38.2
FAN10G3061 Fragaria x ananassa HOM05D001878 ORTHO05D001737 6.4e-06 55.1 143 35.0
Medtr7g081190 Medicago truncatula HOM05D001878 ORTHO05D001737 6.4e-06 55.1 137 35.8
Dinv44041 Davidia involucrata HOM05D001878 ORTHO05D001737 8.4e-06 54.7 99 38.4
Sc14g0001740 Simmondsia chinensis HOM05D001878 ORTHO05D001737 8.4e-06 54.7 101 36.6


User provided reference genes

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