Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold113G31702 Striga asiatica HOM05D012189 ORTHO05D000277 2.4e-142 508.8 255 100.0
SGA_v2.0_scaffold103G30052 Striga asiatica HOM05D000034 ORTHO05D000277 3.6e-82 308.9 300 60.0
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 6.8e-73 278.1 307 53.7
SGA_v2.0_scaffold105G30384 Striga asiatica HOM05D000034 ORTHO05D000277 1.2e-45 187.6 151 64.2
SGA_v2.0_scaffold6G03411 Striga asiatica HOM05D000034 ORTHO05D000277 8.6e-44 181.4 236 47.0
SGA_v2.0_scaffold258G45776 Striga asiatica HOM05D012189 ORTHO05D000277 1.6e-42 177.2 182 53.3
SGA_v2.0_scaffold235G43663 Striga asiatica HOM05D009666 ORTHO05D000277 4.4e-40 169.1 206 46.1
SGA_v2.0_scaffold409G51096 Striga asiatica HOM05D009666 ORTHO05D000277 6.4e-39 165.2 251 46.2
SGA_v2.0_scaffold16G07755 Striga asiatica HOM05D009666 ORTHO05D011401 5.6e-35 152.1 201 47.8
SGA_v2.0_scaffold221G42759 Striga asiatica HOM05D009666 ORTHO05D000277 1.4e-33 147.5 208 39.9
SGA_v2.0_scaffold3145G54282 Striga asiatica HOM05D009666 ORTHO05D000277 1.5e-32 144.1 208 39.4
SGA_v2.0_scaffold10G05247 Striga asiatica HOM05D000034 ORTHO05D000277 6.4e-31 138.7 154 51.9
SGA_v2.0_scaffold73G24466 Striga asiatica HOM05D009666 ORTHO05D000277 2.1e-26 123.6 203 36.5
SGA_v2.0_scaffold53G19369 Striga asiatica HOM05D000034 ORTHO05D000277 3.6e-26 122.9 253 37.5
SGA_v2.0_scaffold464G52000 Striga asiatica HOM05D000034 ORTHO05D000037 1.5e-24 117.5 277 32.9
SGA_v2.0_scaffold154G37147 Striga asiatica HOM05D000034 ORTHO05D000277 2.7e-21 106.7 193 40.4
SGA_v2.0_scaffold26G11283 Striga asiatica HOM05D009666 ORTHO05D000277 1.8e-20 104.0 250 34.8
SGA_v2.0_scaffold123G33397 Striga asiatica HOM05D000034 ORTHO05D000277 3.9e-20 102.8 206 32.5
SGA_v2.0_scaffold174G39206 Striga asiatica HOM05D012189 ORTHO05D000277 1.9e-19 100.5 133 47.4
SGA_v2.0_scaffold68G22817 Striga asiatica HOM05D009707 ORTHO05D010215 4.3e-19 99.4 181 32.0
Hma1.2p1_0035F.1_g021910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.6e-18 97.4 213 29.1
Hma1.2p1_0127F.1_g059736 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-18 96.7 214 29.0
Hma1.2p1_0286F.1_g113985 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-18 96.7 214 29.0
Hma1.2p1_0276F.1_g111440 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.8e-18 95.9 214 29.0
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.1e-18 95.1 214 29.0
SGA_v2.0_scaffold387G50510 Striga asiatica HOM05D012189 ORTHO05D000277 1.4e-17 94.4 108 50.0
Hma1.2p1_0746F.1_g212360 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 2.4e-17 93.6 213 29.1
Hma1.2p1_0846F.1_g227800 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 2.4e-17 93.6 213 29.1
Hma1.2p1_0081F.1_g042220 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.0e-17 92.8 238 30.3
Hma1.2p1_0165F.1_g073390 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.2e-16 91.3 213 28.6
Migut.F01547 Erythranthe guttata HOM05D000034 ORTHO05D000277 5.8e-16 89.0 208 29.3
Hma1.2p1_0489F.1_g164000 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.8e-15 86.3 205 32.2
SGA_v2.0_scaffold265G46065 Striga asiatica HOM05D012189 ORTHO05D000277 3.8e-15 86.3 116 37.9
SGA_v2.0_scaffold380G50359 Striga asiatica HOM05D009707 ORTHO05D010215 3.8e-15 86.3 202 32.2
Actinidia06690 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.1e-14 84.7 216 29.2
Actinidia26110 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.1e-14 84.7 208 29.3
SGA_v2.0_scaffold19G08868 Striga asiatica HOM05D009707 ORTHO05D010215 1.9e-14 84.0 195 29.2
SGA_v2.0_scaffold13G06465 Striga asiatica HOM05D000034 ORTHO05D000277 3.2e-14 83.2 219 27.9
Dinv02446 Davidia involucrata HOM05D000034 ORTHO05D000277 5.5e-14 82.4 202 26.2
Rhsim02G0110600 Rhododendron simsii HOM05D000034 ORTHO05D000277 7.1e-14 82.0 230 29.1
CSS0036595 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 9.3e-14 81.6 209 28.7
CANSAT64G1414 Cannabis sativa HOM05D001651 ORTHO05D000277 9.3e-14 81.6 206 27.7
SGA_v2.0_scaffold102G29874 Striga asiatica HOM05D009707 ORTHO05D000277 4.6e-13 79.3 203 26.1
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 6.0e-13 79.0 201 28.9
Hma1.2p1_0207F.1_g087800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.0e-13 79.0 201 25.4
SGA_v2.0_scaffold27G11629 Striga asiatica HOM05D009707 ORTHO05D010215 7.9e-13 78.6 168 30.4
SGA_v2.0_scaffold19G08712 Striga asiatica HOM05D009707 ORTHO05D010215 1.0e-12 78.2 202 30.2
Rhsim10G0097900 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.3e-12 77.0 230 29.6
SalBow5G4537 Salvia bowleyana HOM05D009908 ORTHO05D012008 2.3e-12 77.0 180 29.4
Hma1.2p1_0672F.1_g201070 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.0e-12 76.6 201 24.9
RhsimUnG0197200 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.9e-12 76.3 216 26.4
Hma1.2p1_0388F.1_g142330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.1e-12 75.9 200 25.5
Rhsim02G0247200 Rhododendron simsii HOM05D000034 ORTHO05D000277 5.1e-12 75.9 199 28.1
CANSAT80G1436 Cannabis sativa HOM05D001651 ORTHO05D000277 6.7e-12 75.5 207 26.6
Hma1.2p1_2244F.1_g317920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.7e-12 75.5 199 25.6
Hma1.2p1_0325F.1_g126110 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.7e-12 75.1 197 25.4
Rhsim07G0014400 Rhododendron simsii HOM05D000034 ORTHO05D000277 8.7e-12 75.1 223 26.5
SGA_v2.0_scaffold486G52372 Striga asiatica HOM05D009666 ORTHO05D000277 8.7e-12 75.1 105 36.2
CSS0024362 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.1e-11 74.7 199 27.1
Hma1.2p1_2373F.1_g320860 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-11 74.7 201 24.4
Actinidia35710 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.5e-11 74.3 187 27.3
CSS0033072 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.5e-11 74.3 199 27.1
CSS0015669 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.5e-11 73.6 199 26.6
Hma1.2p1_0587F.1_g184020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-11 73.6 195 25.6
Hma1.2p1_0046F.1_g026820 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-11 73.2 201 24.4
Rhsim03G0108500 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.3e-11 73.2 223 26.5
Hma1.2p1_0633F.1_g192570 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.3e-11 72.8 204 25.0
Rhsim02G0154600 Rhododendron simsii HOM05D000034 ORTHO05D000277 4.3e-11 72.8 216 26.4
CSS0008044 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 5.7e-11 72.4 204 26.0
Hma1.2p1_0698F.1_g205360 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.7e-11 72.4 185 24.9
CSS0010302 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 7.4e-11 72.0 199 26.6
vmacro06986 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 7.4e-11 72.0 212 26.9
SGA_v2.0_scaffold26G11373 Striga asiatica HOM05D009666 ORTHO05D000277 9.6e-11 71.6 62 64.5
CSS0026213 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.3e-10 71.2 201 28.9
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-10 71.2 221 27.6
CANSAT35G1292 Cannabis sativa HOM05D001651 ORTHO05D000277 1.3e-10 71.2 207 27.1
Hma1.2p1_0232F.1_g097920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.3e-10 71.2 186 25.8
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.6e-10 70.9 221 27.6
Hma1.2p1_0203F.1_g086660 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.6e-10 70.9 195 25.6
Actinidia03627 Actinidia chinensis HOM05D000034 ORTHO05D000277 2.1e-10 70.5 212 25.5
Hma1.2p1_0084F.1_g043280 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.1e-10 70.5 195 26.2
Rhsim10G0022500 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.1e-10 70.5 202 25.2
vmacro15090 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.8e-10 70.1 211 27.5
CSS0031455 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 3.7e-10 69.7 199 26.1
CSS0042392 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 3.7e-10 69.7 199 25.6
CSS0016960 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.3e-10 68.9 197 25.4
PGSC0003DMG400001885 Solanum tuberosum HOM05D008774 ORTHO05D010951 1.4e-09 67.8 253 24.1
SGA_v2.0_scaffold38G14973 Striga asiatica HOM05D009666 ORTHO05D400755 3.1e-09 66.6 94 41.5
PGSC0003DMG400030305 Solanum tuberosum HOM05D008774 ORTHO05D010951 4.1e-09 66.2 257 24.5
Atru.chr2.3198 Acer truncatum HOM05D001651 ORTHO05D000277 5.3e-09 65.9 193 25.9
CSS0028844 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.3e-09 65.9 219 27.4
CSS0040966 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.9e-09 65.5 199 26.1
Rhsim05G0045400 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.2e-08 64.7 264 25.0
CANSAT56G0820 Cannabis sativa HOM05D001651 ORTHO05D000277 1.5e-08 64.3 202 27.7
Dinv18323 Davidia involucrata HOM05D000034 ORTHO05D000277 1.5e-08 64.3 200 26.0
DCAR_018898 Daucus carota HOM05D001651 ORTHO05D000277 2.0e-08 63.9 198 24.7
Atru.chr12.953 Acer truncatum HOM05D001651 ORTHO05D000277 2.6e-08 63.5 193 24.4
Hma1.2p1_2228F.1_g317520 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.4e-08 63.2 194 24.7
SGA_v2.0_scaffold70G23408 Striga asiatica HOM05D000228 ORTHO05D001122 5.8e-08 62.4 102 32.4
SGA_v2.0_scaffold13G06594 Striga asiatica HOM05D012189 ORTHO05D000277 7.6e-08 62.0 100 38.0
Dinv36440 Davidia involucrata HOM05D012673 ORTHO05D000277 1.3e-07 61.2 189 27.0
SGA_v2.0_scaffold204G41621 Striga asiatica HOM05D012189 ORTHO05D000277 1.3e-07 61.2 115 38.3
DCAR_009785 Daucus carota HOM05D001651 ORTHO05D000277 2.9e-07 60.1 206 24.3
DCAR_011368 Daucus carota HOM05D001651 ORTHO05D000277 2.9e-07 60.1 198 24.2
DCAR_011369 Daucus carota HOM05D001651 ORTHO05D000277 2.9e-07 60.1 198 24.2
DCAR_015799 Daucus carota HOM05D001651 ORTHO05D000277 2.9e-07 60.1 206 24.3
Atru.chr10.926 Acer truncatum HOM05D001651 ORTHO05D000277 8.4e-07 58.5 188 26.1
SalBow2G2966 Salvia bowleyana HOM05D012189 ORTHO05D000277 8.4e-07 58.5 210 26.7
EL10Ac3g05873 Beta vulgaris HOM05D000034 ORTHO05D000277 1.1e-06 58.2 207 25.6
Rhsim04G0059300 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.1e-06 58.2 238 23.5
Dinv16912 Davidia involucrata HOM05D012673 ORTHO05D000277 1.9e-06 57.4 189 27.5
SalBow1G1871 Salvia bowleyana HOM05D009908 ORTHO05D012008 2.5e-06 57.0 145 28.3
SGA_v2.0_scaffold50G18516 Striga asiatica HOM05D009707 ORTHO05D012008 2.5e-06 57.0 182 23.6
Sopen01g043080 Solanum pennellii HOM05D008774 ORTHO05D010951 5.5e-06 55.8 260 22.7
Sopen02g014140 Solanum pennellii HOM05D000034 ORTHO05D000037 5.5e-06 55.8 260 22.7
Sopen09g033840 Solanum pennellii HOM05D000034 ORTHO05D000037 5.5e-06 55.8 260 22.7
vmacro07718 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 5.5e-06 55.8 187 26.2
PGSC0003DMG400006515 Solanum tuberosum HOM05D008774 ORTHO05D010951 7.2e-06 55.5 249 22.1
Dinv08467 Davidia involucrata HOM05D000034 ORTHO05D000277 9.3e-06 55.1 87 34.5
SGA_v2.0_scaffold214G42275 Striga asiatica HOM05D009707 ORTHO05D010215 9.3e-06 55.1 130 28.5


User provided reference genes

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