Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 6.5e-128 460.7 223 100.0
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 5.1e-48 195.3 225 50.2
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 1.1e-42 177.6 208 50.0
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 1.1e-39 167.5 213 46.5
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 1.4e-37 160.6 213 45.1
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 7.6e-36 154.8 236 43.2
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 9.9e-36 154.5 219 43.8
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 1.7e-35 153.7 249 40.6
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 3.2e-34 149.4 200 43.0
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 1.6e-33 147.1 216 43.1
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.1e-33 146.7 217 42.9
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 2.1e-33 146.7 220 41.8
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 4.6e-33 145.6 249 40.6
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 4.6e-33 145.6 247 40.5
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 7.8e-33 144.8 220 37.7
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 7.8e-33 144.8 249 39.8
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.0e-32 144.4 226 40.7
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 1.3e-32 144.1 243 37.9
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.3e-32 144.1 173 45.1
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 3.0e-32 142.9 217 39.2
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 3.0e-32 142.9 213 42.7
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 8.7e-32 141.4 250 38.0
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 8.7e-32 141.4 227 38.3
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.9e-31 140.2 223 39.0
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 2.5e-31 139.8 218 39.4
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 3.3e-31 139.4 216 39.4
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 7.3e-31 138.3 224 39.7
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 7.3e-31 138.3 216 38.9
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 9.6e-31 137.9 200 41.0
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 1.6e-30 137.1 223 39.5
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 2.1e-30 136.7 216 39.4
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 2.1e-30 136.7 225 36.4
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 3.6e-30 136.0 233 37.3
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 3.6e-30 136.0 196 43.9
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 4.8e-30 135.6 224 39.3
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 6.2e-30 135.2 225 42.7
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 8.1e-30 134.8 216 38.4
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 1.4e-29 134.0 223 40.4
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 1.4e-29 134.0 226 36.7
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 1.4e-29 134.0 193 41.5
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 1.8e-29 133.7 88 68.2
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.8e-29 133.7 230 39.1
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 2.4e-29 133.3 250 36.0
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 4.0e-29 132.5 227 36.6
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 5.3e-29 132.1 221 37.1
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 6.9e-29 131.7 219 37.9
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 6.9e-29 131.7 225 37.8
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 9.0e-29 131.3 223 38.6
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 1.2e-28 131.0 207 41.5
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 1.2e-28 131.0 213 39.9
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 2.0e-28 130.2 250 35.2
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 4.5e-28 129.0 229 37.1
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 1.3e-27 127.5 225 38.7
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 3.8e-27 125.9 231 36.8
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 4.9e-27 125.6 77 71.4
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 4.9e-27 125.6 220 35.9
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 6.4e-27 125.2 236 33.9
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 1.1e-26 124.4 227 34.8
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 3.2e-26 122.9 230 37.0
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 9.3e-26 121.3 89 61.8
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 9.3e-26 121.3 241 37.3
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 3.5e-25 119.4 80 65.0
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 3.5e-25 119.4 222 35.1
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 6.0e-25 118.6 211 38.4
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 1.0e-24 117.9 227 33.9
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 1.3e-24 117.5 81 63.0
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 2.3e-24 116.7 226 34.5
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 5.1e-24 115.5 80 67.5
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 6.7e-24 115.2 230 34.3
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 1.1e-23 114.4 230 34.3
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 9.6e-23 111.3 95 55.8
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.3e-22 110.9 224 35.3
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.1e-22 110.2 231 33.8
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 3.6e-22 109.4 227 33.5
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 4.8e-22 109.0 227 34.4
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 8.1e-22 108.2 221 35.7
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 4.0e-21 105.9 83 57.8
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 5.3e-21 105.5 79 60.8
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.2e-20 104.4 83 57.8
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 4.5e-20 102.4 109 47.7
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 4.5e-20 102.4 109 47.7
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 5.8e-20 102.1 101 50.5
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 9.9e-20 101.3 89 51.7
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 1.3e-19 100.9 89 51.7
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 1.3e-19 100.9 84 54.8
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 2.2e-19 100.1 89 51.7
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 2.9e-19 99.8 89 50.6
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 6.4e-19 98.6 151 40.4
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 1.1e-18 97.8 151 40.4
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 1.1e-18 97.8 151 40.4
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 1.1e-18 97.8 89 50.6
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 1.4e-18 97.4 79 58.2
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 1.4e-18 97.4 106 50.0
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 1.2e-17 94.4 88 47.7
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 3.5e-17 92.8 88 48.9
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 4.6e-17 92.4 75 56.0
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 3.9e-16 89.4 80 51.2
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 1.1e-13 81.3 97 40.2
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 2.2e-11 73.6 193 32.1
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 1.6e-09 67.4 170 34.7
Phvul.008G018600 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 3.3e-07 59.7 74 39.2
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 5.7e-07 58.9 66 47.0
Ciclev10031840m.g Citrus clementina HOM05D002304 ORTHO05D002363 2.1e-06 57.0 96 33.3
CSS0042081 Camellia sinensis var. sinensis HOM05D002304 ORTHO05D002363 2.8e-06 56.6 81 39.5
Hma1.2p1_0459F.1_g157130 Hydrangea macrophylla HOM05D002304 ORTHO05D002363 3.7e-06 56.2 74 41.9
Hund25504 Selenicereus undatus HOM05D002304 ORTHO05D002363 4.8e-06 55.8 54 50.0
Ah.03g135680 Amaranthus hybridus HOM05D002304 ORTHO05D002363 6.3e-06 55.5 74 39.2
vmacro16079 Vaccinium macrocarpon HOM05D002304 ORTHO05D002363 6.3e-06 55.5 57 49.1
Actinidia34006 Actinidia chinensis HOM05D002304 ORTHO05D002363 8.2e-06 55.1 57 49.1
CBR_g31169 Chara braunii HOM05D002304 ORTHO05D002363 8.2e-06 55.1 61 42.6
Phvul.008G018900 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 8.2e-06 55.1 111 34.2


User provided reference genes

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