Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold112G31613 Striga asiatica HOM05D002952 ORTHO05D003361 4.1e-119 431.4 216 100.0
Migut.J00788 Erythranthe guttata HOM05D002952 ORTHO05D003361 6.3e-88 327.8 216 74.1
MSTRG.5937 Avicennia marina HOM05D002952 ORTHO05D003361 2.5e-84 315.8 205 74.1
Oeu064560.1 Olea europaea HOM05D002952 ORTHO05D003361 2.6e-81 305.8 216 67.1
Cc06_g17430 Coffea canephora HOM05D002952 ORTHO05D003361 1.3e-77 293.5 211 67.3
Peaxi162Scf00231g00918 Petunia axillaris HOM05D002952 ORTHO05D003361 5.0e-77 291.6 204 65.2
Dinv41190 Davidia involucrata HOM05D002952 ORTHO05D003361 6.1e-75 284.6 215 63.7
Hma1.2p1_0235F.1_g098720 Hydrangea macrophylla HOM05D002952 ORTHO05D003361 4.0e-74 282.0 215 62.3
Cfa013462 Carpinus fangiana HOM05D002952 ORTHO05D003361 5.2e-74 281.6 215 64.7
unitig_26.g9160 Utricularia gibba HOM05D002952 ORTHO05D003361 1.5e-73 280.0 200 70.5
Haze_22041 Corylus avellana HOM05D002952 ORTHO05D003361 2.0e-73 279.6 204 66.7
Nitab4.5_0001245g0040 Nicotiana tabacum HOM05D002952 ORTHO05D003361 2.0e-73 279.6 200 64.5
CAN.G32.3 Capsicum annuum HOM05D002952 ORTHO05D003361 3.4e-73 278.9 202 63.9
Atru.chr7.937 Acer truncatum HOM05D002952 ORTHO05D003361 2.9e-72 275.8 202 66.3
Manes.06G018200 Manihot esculenta HOM05D002952 ORTHO05D003361 2.4e-71 272.7 203 65.0
Solyc07g018090.4 Solanum lycopersicum HOM05D002952 ORTHO05D003361 2.4e-71 272.7 202 62.4
Sopen07g007020 Solanum pennellii HOM05D002952 ORTHO05D003361 2.4e-71 272.7 202 62.4
Dinv25450 Davidia involucrata HOM05D002952 ORTHO05D003361 1.6e-70 270.0 216 63.0
GSVIVG01029303001 Vitis vinifera HOM05D002952 ORTHO05D003361 2.7e-70 269.2 204 63.7
DCAR_014676 Daucus carota HOM05D002952 ORTHO05D003361 5.9e-70 268.1 202 63.9
CiPaw.07G198300 Carya illinoinensis HOM05D002952 ORTHO05D003361 7.8e-70 267.7 205 63.4
Ciclev10007425m.g Citrus clementina HOM05D002952 ORTHO05D003361 1.3e-69 266.9 207 64.3
Cpa.g.sc115.66 Carica papaya HOM05D002952 ORTHO05D003361 3.0e-69 265.8 204 63.2
Actinidia38497 Actinidia chinensis HOM05D002952 ORTHO05D003361 5.0e-69 265.0 215 58.1
Rhsim03G0267600 Rhododendron simsii HOM05D002952 ORTHO05D003361 5.0e-69 265.0 216 59.3
FvH4_4g07030 Fragaria vesca HOM05D002952 ORTHO05D003361 3.3e-68 262.3 204 63.2
FAN12G2043 Fragaria x ananassa HOM05D002952 ORTHO05D003361 3.3e-68 262.3 204 63.2
FAN22G0487 Fragaria x ananassa HOM05D002952 ORTHO05D003361 4.3e-68 261.9 204 63.7
Duzib150G0495 Durio zibethinus HOM05D002952 ORTHO05D003361 7.3e-68 261.2 198 65.7
MD13G1240300 Malus domestica HOM05D002952 ORTHO05D003361 7.3e-68 261.2 204 62.7
FAN17G1204 Fragaria x ananassa HOM05D002952 ORTHO05D003361 1.2e-67 260.4 204 62.7
RcHm_v2.0_Chr4g0399151 Rosa chinensis HOM05D002952 ORTHO05D003361 1.6e-67 260.0 204 63.2
CSS0013758 Camellia sinensis var. sinensis HOM05D002952 ORTHO05D003361 2.8e-67 259.2 203 62.6
ECA240G1792 Erigeron canadensis HOM05D002952 ORTHO05D003361 2.8e-67 259.2 198 62.6
Lj6g0025977 Lotus japonicus HOM05D002952 ORTHO05D003361 2.8e-67 259.2 215 60.9
Thecc.09G188100 Theobroma cacao HOM05D002952 ORTHO05D003361 3.6e-67 258.8 198 65.2
FAN07G2391 Fragaria x ananassa HOM05D002952 ORTHO05D003361 6.2e-67 258.1 204 61.8
Prupe.1G073600 Prunus persica HOM05D002952 ORTHO05D003361 8.0e-67 257.7 204 61.3
COL.COLO4_23445 Corchorus olitorius HOM05D002952 ORTHO05D003361 1.4e-66 256.9 198 65.7
Aqoxy7G02883 Aquilegia oxysepala HOM05D002952 ORTHO05D003361 1.8e-66 256.5 203 62.1
Potri.018G140800 Populus trichocarpa HOM05D002952 ORTHO05D003361 1.8e-66 256.5 202 59.9
Gohir.D13G212300 Gossypium hirsutum HOM05D002952 ORTHO05D003361 2.3e-66 256.1 198 63.6
Gorai.013G242600 Gossypium raimondii HOM05D002952 ORTHO05D003361 2.3e-66 256.1 198 63.6
Eucgr.C00100 Eucalyptus grandis HOM05D002952 ORTHO05D003361 3.1e-66 255.8 208 60.6
VMungo1309G2675 Vigna mungo HOM05D002952 ORTHO05D003361 3.1e-66 255.8 205 60.5
arahy.Tifrunner.gnm1.ann1.32QIWM Arachis hypogaea HOM05D002952 ORTHO05D003361 5.2e-66 255.0 204 60.3
Glyma.15G167100 Glycine max HOM05D002952 ORTHO05D003361 6.8e-66 254.6 212 59.9
arahy.Tifrunner.gnm1.ann1.MZE1GT Arachis hypogaea HOM05D002952 ORTHO05D003361 1.2e-65 253.8 204 59.8
Gohir.A13G207800 Gossypium hirsutum HOM05D002952 ORTHO05D003361 2.0e-65 253.1 198 63.1
Lsat_1_v5_gn_7_55800 Lactuca sativa HOM05D002952 ORTHO05D003361 2.6e-65 252.7 198 61.6
PGR142G2741 Punica granatum HOM05D002952 ORTHO05D003361 4.4e-65 251.9 215 57.2
Lalb_Chr07g0180711 Lupinus albus HOM05D002952 ORTHO05D003361 5.8e-65 251.5 200 60.0
Thhalv10022546m.g Eutrema salsugineum HOM05D002952 ORTHO05D003361 7.5e-65 251.1 203 61.1
BraA07t29362Z Brassica rapa HOM05D002952 ORTHO05D003361 2.2e-64 249.6 217 58.1
BcaB08g34852 Brassica carinata HOM05D002952 ORTHO05D003361 2.9e-64 249.2 215 57.7
Lalb_Chr13g0299881 Lupinus albus HOM05D002952 ORTHO05D003361 2.9e-64 249.2 198 61.1
vmacro05990 Vaccinium macrocarpon HOM05D002952 ORTHO05D003361 2.9e-64 249.2 237 52.7
HanXRQChr03g0065441 Helianthus annuus HOM05D002952 ORTHO05D003361 4.9e-64 248.4 198 61.1
A07p16350 Brassica napus HOM05D002952 ORTHO05D003361 6.4e-64 248.1 209 60.3
BolC7t42928H Brassica oleracea HOM05D002952 ORTHO05D003361 6.4e-64 248.1 217 58.5
Sabra18G0115000 Salix brachista HOM05D002952 ORTHO05D003361 1.1e-63 247.3 221 55.7
THA.LOC104814647 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 1.1e-63 247.3 206 57.8
C07p24030 Brassica napus HOM05D002952 ORTHO05D003361 1.9e-63 246.5 217 58.1
CANSAT01G1287 Cannabis sativa HOM05D002952 ORTHO05D003361 7.0e-63 244.6 198 60.1
Psat1g143480 Pisum sativum HOM05D002952 ORTHO05D003361 1.2e-62 243.8 204 60.3
Ca_02121_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 2.0e-62 243.0 215 56.7
Medtr2g038210 Medicago truncatula HOM05D002952 ORTHO05D003361 3.5e-62 242.3 215 57.2
Sed0020294 Sechium edule HOM05D002952 ORTHO05D003361 6.0e-62 241.5 204 59.3
TPR.G5387 Trifolium pratense HOM05D002952 ORTHO05D003361 6.0e-62 241.5 215 57.2
Lju170C21T3 Lonicera japonica HOM05D002952 ORTHO05D003361 1.3e-61 240.4 195 60.5
Sabra06G0054900 Salix brachista HOM05D002952 ORTHO05D003361 1.3e-61 240.4 202 57.9
TPR.G31045 Trifolium pratense HOM05D002952 ORTHO05D003361 1.3e-61 240.4 215 57.2
Potri.006G073600 Populus trichocarpa HOM05D002952 ORTHO05D003361 1.7e-61 240.0 202 56.9
THA.LOC104803958 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 2.3e-61 239.6 207 58.9
THA.LOC104804523 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 2.3e-61 239.6 207 58.9
THA.LOC104804524 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 2.3e-61 239.6 207 58.9
THA.LOC104804525 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 2.3e-61 239.6 207 58.9
AT3G28430 Arabidopsis thaliana HOM05D002952 ORTHO05D003361 3.0e-61 239.2 200 60.5
BcaC06g36561 Brassica carinata HOM05D002952 ORTHO05D003361 3.9e-61 238.8 203 57.1
C07p02900 Brassica napus HOM05D002952 ORTHO05D003361 3.9e-61 238.8 203 57.1
Lj4g0023754 Lotus japonicus HOM05D002952 ORTHO05D003361 3.9e-61 238.8 204 56.4
Ca_21260_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 5.0e-61 238.4 215 56.3
ClCG11G011660 Citrullus lanatus HOM05D002952 ORTHO05D003361 5.0e-61 238.4 204 58.3
Sp3g32670 Schrenkiella parvula HOM05D002952 ORTHO05D003361 5.0e-61 238.4 215 56.7
BcaB03g14394 Brassica carinata HOM05D002952 ORTHO05D003361 1.1e-60 237.3 191 62.3
A07p01440 Brassica napus HOM05D002952 ORTHO05D003361 1.1e-60 237.3 203 57.1
Psat4g013440 Pisum sativum HOM05D002952 ORTHO05D003361 2.5e-60 236.1 215 55.3
PSO170G2574 Papaver somniferum HOM05D002952 ORTHO05D003361 3.3e-60 235.7 203 56.2
AL5G18050 Arabidopsis lyrata HOM05D002952 ORTHO05D003361 5.6e-60 235.0 205 58.5
MELO3C003959.2 Cucumis melo HOM05D002952 ORTHO05D003361 7.3e-60 234.6 204 57.4
MBI14_g10721_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 1.2e-59 233.8 197 60.4
PSO063G0242 Papaver somniferum HOM05D002952 ORTHO05D003361 1.6e-59 233.4 203 55.7
CsaV3_2G008810 Cucumis sativus L. HOM05D002952 ORTHO05D003361 2.1e-59 233.0 204 56.4
Aa31LG8G16340 Aethionema arabicum HOM05D002952 ORTHO05D003361 3.6e-59 232.3 186 61.8
Carub.0005s0694 Capsella rubella HOM05D002952 ORTHO05D003361 1.1e-58 230.7 200 58.5
BcaB03g16719 Brassica carinata HOM05D002952 ORTHO05D003361 1.8e-58 229.9 203 56.2
ATR0580G026 Amborella trichopoda HOM05D002952 ORTHO05D003361 5.2e-58 228.4 199 55.3
AUR62031276 Chenopodium quinoa HOM05D002952 ORTHO05D003361 1.5e-57 226.9 200 55.5
BraA07t27938Z Brassica rapa HOM05D002952 ORTHO05D003361 2.0e-57 226.5 203 55.7
HanXRQChr09g0245381 Helianthus annuus HOM05D002952 ORTHO05D003361 2.0e-57 226.5 195 55.4
Medtr4g127210 Medicago truncatula HOM05D002952 ORTHO05D003361 2.0e-57 226.5 202 55.9
AUR62027417 Chenopodium quinoa HOM05D002952 ORTHO05D003361 3.4e-57 225.7 196 55.6
Phvul.003G140400 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 5.8e-57 224.9 202 55.9
VMungo1215G0843 Vigna mungo HOM05D002952 ORTHO05D003361 9.8e-57 224.2 202 55.4
EL10Ac8g19298 Beta vulgaris HOM05D002952 ORTHO05D003361 2.9e-56 222.6 196 55.6
CARHR292530 Cardamine hirsuta HOM05D002952 ORTHO05D003361 3.7e-56 222.2 203 54.7
Os04g0298600 Oryza sativa ssp. japonica HOM05D002952 ORTHO05D003361 3.2e-55 219.2 200 55.0
Sc14g0003040 Simmondsia chinensis HOM05D002952 ORTHO05D003361 3.2e-55 219.2 196 56.1
Zm00001eb420400 Zea mays HOM05D002952 ORTHO05D003361 9.2e-55 217.6 200 54.0
QL02p047151 Quercus lobata HOM05D002952 ORTHO05D003361 1.7e-53 213.4 145 70.3
Ah.09g229430 Amaranthus hybridus HOM05D002952 ORTHO05D003361 2.3e-50 203.0 179 54.2
HPP92_015379 Vanilla planifolia HOM05D002952 ORTHO05D003361 1.5e-49 200.3 213 51.6
MBI16_g46830_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 1.2e-43 180.6 140 62.1
Actinidia29954 Actinidia chinensis HOM05D002952 ORTHO05D003361 3.4e-41 172.6 199 46.7
SEGI_03548 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 4.4e-41 172.2 195 48.7
Hund12689 Selenicereus undatus HOM05D002952 ORTHO05D003361 3.2e-39 166.0 144 56.2
Actinidia25392 Actinidia chinensis HOM05D002952 ORTHO05D003361 6.2e-35 151.8 120 58.3
Nitab4.5_0006774g0010 Nicotiana tabacum HOM05D002952 ORTHO05D003361 6.9e-34 148.3 137 52.6
Pp3c5_16960 Physcomitrium patens HOM05D002952 ORTHO05D003361 2.0e-33 146.7 199 38.2
Glyma.09G060600 Glycine max HOM05D002952 ORTHO05D003361 8.4e-32 141.4 115 59.1
Mapoly0006s0005 Marchantia polymorpha HOM05D002952 ORTHO05D003361 1.4e-31 140.6 211 42.7
SMO356G0480 Selaginella moellendorffii HOM05D002952 ORTHO05D003361 1.9e-31 140.2 198 41.9
Pp3c16_8730 Physcomitrium patens HOM05D002952 ORTHO05D003361 5.4e-31 138.7 197 39.6
CDE05G2761 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 1.2e-30 137.5 115 55.7
CDE05G1903 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 2.1e-30 136.7 115 55.7
CBR_g9125 Chara braunii HOM05D002952 ORTHO05D003361 1.3e-29 134.0 202 38.6
Nn8g40677 Nelumbo nucifera HOM05D002952 ORTHO05D003361 3.3e-28 129.4 115 53.9
CANSAT64G1472 Cannabis sativa HOM05D002952 ORTHO05D003361 3.4e-25 119.4 196 36.7
RcHm_v2.0_Chr3g0475531 Rosa chinensis HOM05D002952 ORTHO05D003361 7.6e-25 118.2 209 34.9
FAN05G1787 Fragaria x ananassa HOM05D002952 ORTHO05D003361 9.9e-25 117.9 209 35.4
FvH4_6g20080 Fragaria vesca HOM05D002952 ORTHO05D003361 1.3e-24 117.5 209 35.4
COL.COLO4_29595 Corchorus olitorius HOM05D002952 ORTHO05D003361 1.7e-24 117.1 205 35.6
FAN09G1177 Fragaria x ananassa HOM05D002952 ORTHO05D003361 2.9e-24 116.3 195 35.4
FAN14G0567 Fragaria x ananassa HOM05D002952 ORTHO05D003361 6.4e-24 115.2 209 34.9
CiPaw.10G016000 Carya illinoinensis HOM05D002952 ORTHO05D003361 1.4e-23 114.0 208 36.1
Duzib093G0565 Durio zibethinus HOM05D002952 ORTHO05D003361 4.2e-23 112.5 207 35.3
QL07p037253 Quercus lobata HOM05D002952 ORTHO05D003361 5.5e-23 112.1 198 34.3
ATR0772G085 Amborella trichopoda HOM05D002952 ORTHO05D003361 7.1e-23 111.7 138 41.3
Haze_19692 Corylus avellana HOM05D002952 ORTHO05D003361 7.1e-23 111.7 200 37.5
Thecc.05G101800 Theobroma cacao HOM05D002952 ORTHO05D003361 1.2e-22 110.9 198 34.8
Gohir.A09G135300 Gossypium hirsutum HOM05D002952 ORTHO05D003361 3.5e-22 109.4 195 35.4
CSS0009413 Camellia sinensis var. sinensis HOM05D002952 ORTHO05D003361 4.6e-22 109.0 196 35.2
Cfa016675 Carpinus fangiana HOM05D002952 ORTHO05D003361 4.6e-22 109.0 198 36.9
vmacro08846 Vaccinium macrocarpon HOM05D002952 ORTHO05D003361 4.6e-22 109.0 205 32.7
Prupe.7G097500 Prunus persica HOM05D002952 ORTHO05D003361 6.0e-22 108.6 201 36.3
PGR004G2265 Punica granatum HOM05D002952 ORTHO05D003361 1.0e-21 107.8 199 34.7
Atru.chr8.1386 Acer truncatum HOM05D002952 ORTHO05D003361 1.3e-21 107.5 196 35.2
TAR633G2330 Trochodendron aralioides HOM05D002952 ORTHO05D003361 1.3e-21 107.5 210 35.7
Lj5g0011168 Lotus japonicus HOM05D002952 ORTHO05D003361 1.8e-21 107.1 208 32.7
Potri.006G204600 Populus trichocarpa HOM05D002952 ORTHO05D003361 1.8e-21 107.1 194 34.5
Phvul.007G269200 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 3.0e-21 106.3 212 34.4
Cpa.g.sc104.51 Carica papaya HOM05D002952 ORTHO05D003361 3.9e-21 105.9 141 37.6
Rhsim04G0130200 Rhododendron simsii HOM05D002952 ORTHO05D003361 3.9e-21 105.9 203 32.0
Sc02g0000570 Simmondsia chinensis HOM05D002952 ORTHO05D003361 3.9e-21 105.9 203 35.5
Ca_11716_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 5.1e-21 105.5 205 32.7
PSO384G1939 Papaver somniferum HOM05D002952 ORTHO05D003361 5.1e-21 105.5 195 34.9
Nn6g34739 Nelumbo nucifera HOM05D002952 ORTHO05D003361 1.5e-20 104.0 198 33.8
Psat6g084840 Pisum sativum HOM05D002952 ORTHO05D003361 1.5e-20 104.0 207 34.3
Dinv12331 Davidia involucrata HOM05D002952 ORTHO05D003361 1.9e-20 103.6 196 34.2
Gorai.006G150500 Gossypium raimondii HOM05D002952 ORTHO05D003361 2.5e-20 103.2 196 35.2
Lj1C1049T3 Lonicera japonica HOM05D002952 ORTHO05D003361 3.3e-20 102.8 166 34.3
Glyma.02G198100 Glycine max HOM05D002952 ORTHO05D003361 4.3e-20 102.4 211 35.1
MD14G1036800 Malus domestica HOM05D002952 ORTHO05D003361 5.6e-20 102.1 198 34.3
FAN02G4506 Fragaria x ananassa HOM05D002952 ORTHO05D003361 7.4e-20 101.7 155 38.1
SEGI_10738 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 2.1e-19 100.1 113 46.0
MD12G1037800 Malus domestica HOM05D002952 ORTHO05D003361 2.8e-19 99.8 198 32.8
Actinidia07937 Actinidia chinensis HOM05D002952 ORTHO05D003361 8.1e-19 98.2 141 38.3
Eucgr.A02600 Eucalyptus grandis HOM05D002952 ORTHO05D003361 1.1e-18 97.8 199 34.2
TPR.G31863 Trifolium pratense HOM05D002952 ORTHO05D003361 1.1e-18 97.8 205 32.2
VMungo0720G0970 Vigna mungo HOM05D002952 ORTHO05D003361 1.8e-18 97.1 154 35.7
Ciclev10011126m.g Citrus clementina HOM05D002952 ORTHO05D003361 2.4e-18 96.7 195 32.3
Medtr1g057130 Medicago truncatula HOM05D002952 ORTHO05D003361 7.6e-17 91.7 180 32.2
AagrBONN_evm.TU.Sc2ySwM_362.2680 Anthoceros agrestis HOM05D002952 ORTHO05D003361 1.0e-16 91.3 119 39.5
Manes.08G032200 Manihot esculenta HOM05D002952 ORTHO05D003361 1.3e-16 90.9 197 32.5
Glyma.10G078851 Glycine max HOM05D002952 ORTHO05D003361 2.9e-16 89.7 204 31.9
Cc06_g06410 Coffea canephora HOM05D002952 ORTHO05D003361 9.3e-15 84.7 199 28.1
Sabra06G0157600 Salix brachista HOM05D002952 ORTHO05D003361 9.3e-15 84.7 253 26.9
PRCOL_00003380 Prasinoderma coloniale HOM05D002952 ORTHO05D003361 7.9e-14 81.6 159 33.3
CDE02G4171 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 3.9e-13 79.3 180 31.7
Cre12.g515250 Chlamydomonas reinhardtii HOM05D002952 ORTHO05D003361 5.9e-09 65.5 168 28.6
EL10Ac7g16807 Beta vulgaris HOM05D002952 ORTHO05D003361 1.2e-06 57.8 97 34.0
Gohir.D09G131900 Gossypium hirsutum HOM05D002952 ORTHO05D003361 2.7e-06 56.6 116 34.5


User provided reference genes

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