Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31544 Striga asiatica HOM05D005166 ORTHO05D006120 0.0e+00 1219.9 817 100.0
Migut.D00877 Erythranthe guttata HOM05D005166 ORTHO05D006120 1.2e-144 518.1 849 57.8
MSTRG.21221 Avicennia marina HOM05D005166 ORTHO05D006120 7.9e-123 445.7 902 53.1
Nitab4.5_0001999g0010 Nicotiana tabacum HOM05D005166 ORTHO05D006120 8.2e-88 329.3 890 49.8
PGSC0003DMG400027986 Solanum tuberosum HOM05D005166 ORTHO05D006120 4.7e-83 313.5 898 47.0
Dinv34287 Davidia involucrata HOM05D005166 ORTHO05D006120 4.1e-79 300.4 900 44.9
Nitab4.5_0005248g0020 Nicotiana tabacum HOM05D005166 ORTHO05D006120 3.5e-78 297.4 922 42.0
CSS0046995 Camellia sinensis var. sinensis HOM05D005166 ORTHO05D006120 4.2e-76 290.4 877 43.3
CAN.G3.46 Capsicum annuum HOM05D005166 ORTHO05D006120 3.0e-74 284.3 806 47.5
Dinv42991 Davidia involucrata HOM05D005166 ORTHO05D006120 4.8e-72 276.9 877 46.8
Dinv43106 Davidia involucrata HOM05D005166 ORTHO05D006120 4.8e-72 276.9 877 46.8
Sopen09g013470 Solanum pennellii HOM05D005166 ORTHO05D006120 1.0e-69 269.2 927 45.7
Thecc.09G315500 Theobroma cacao HOM05D005166 ORTHO05D006120 1.0e-69 269.2 280 62.1
Prupe.6G070300 Prunus persica HOM05D005166 ORTHO05D006120 1.3e-69 268.9 883 46.0
Dinv17047 Davidia involucrata HOM05D005166 ORTHO05D006120 1.7e-69 268.5 881 45.7
Cc01_g13350 Coffea canephora HOM05D005166 ORTHO05D006120 1.2e-67 262.3 227 66.1
Hma1.2p1_1664F.1_g296420 Hydrangea macrophylla HOM05D005166 ORTHO05D006120 2.1e-67 261.5 913 43.9
Rhsim13G0077000 Rhododendron simsii HOM05D005166 ORTHO05D006120 3.0e-66 257.7 887 44.8
Potri.009G036900 Populus trichocarpa HOM05D005166 ORTHO05D006120 6.8e-66 256.5 913 43.4
TAR633G1610 Trochodendron aralioides HOM05D005166 ORTHO05D006120 2.0e-65 255.0 949 43.4
Manes.01G169300 Manihot esculenta HOM05D005166 ORTHO05D006120 2.6e-65 254.6 282 57.4
Gorai.013G262700 Gossypium raimondii HOM05D005166 ORTHO05D006120 5.7e-65 253.4 277 59.2
Nn2g13459 Nelumbo nucifera HOM05D005166 ORTHO05D006120 5.7e-65 253.4 289 58.1
Gohir.D13G232000 Gossypium hirsutum HOM05D005166 ORTHO05D006120 9.8e-65 252.7 279 58.8
MD11G1094700 Malus domestica HOM05D005166 ORTHO05D006120 1.7e-64 251.9 895 42.6
TAR636G0020 Trochodendron aralioides HOM05D005166 ORTHO05D006120 1.7e-64 251.9 944 43.4
Gohir.A13G226600 Gossypium hirsutum HOM05D005166 ORTHO05D006120 2.8e-64 251.1 251 61.0
Lalb_Chr01g0003471 Lupinus albus HOM05D005166 ORTHO05D006120 8.3e-64 249.6 286 57.0
Sabra09G0026100 Salix brachista HOM05D005166 ORTHO05D006120 8.3e-64 249.6 785 44.5
Lalb_Chr19g0137981 Lupinus albus HOM05D005166 ORTHO05D006120 1.8e-63 248.4 278 57.6
Nn2g11213 Nelumbo nucifera HOM05D005166 ORTHO05D006120 4.1e-63 247.3 923 41.6
MD03G1086100 Malus domestica HOM05D005166 ORTHO05D006120 4.5e-62 243.8 869 43.2
Hund04921 Selenicereus undatus HOM05D005166 ORTHO05D006120 5.9e-62 243.4 147 83.0
Glyma.12G059700 Glycine max HOM05D005166 ORTHO05D006120 7.7e-62 243.0 291 55.7
Duzib168G0713 Durio zibethinus HOM05D005166 ORTHO05D006120 1.0e-61 242.7 876 44.6
Glyma.11G136000 Glycine max HOM05D005166 ORTHO05D006120 1.0e-61 242.7 247 59.9
AL4G23770 Arabidopsis lyrata HOM05D005166 ORTHO05D006120 2.3e-61 241.5 294 53.7
TAR636G0138 Trochodendron aralioides HOM05D005166 ORTHO05D006120 2.3e-61 241.5 939 43.0
CsaV3_1G034540 Cucumis sativus L. HOM05D005166 ORTHO05D006120 2.9e-61 241.1 233 62.7
CDE07G0344 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 3.8e-61 240.7 281 54.8
Os03g0270200 Oryza sativa ssp. japonica HOM05D005166 ORTHO05D006120 5.0e-61 240.4 147 83.0
GSVIVG01024906001 Vitis vinifera HOM05D005166 ORTHO05D006120 6.6e-61 240.0 804 42.4
EL10Ac7g16070 Beta vulgaris HOM05D005166 ORTHO05D006120 2.5e-60 238.0 148 82.4
Lalb_Chr03g0026441 Lupinus albus HOM05D005166 ORTHO05D006120 4.3e-60 237.3 295 55.9
arahy.Tifrunner.gnm1.ann1.L8ZXQA Arachis hypogaea HOM05D005166 ORTHO05D006120 5.6e-60 236.9 268 56.3
HanXRQChr01g0001871 Helianthus annuus HOM05D005166 ORTHO05D006120 5.6e-60 236.9 287 53.7
Peaxi162Scf00676g00220 Petunia axillaris HOM05D005166 ORTHO05D006120 5.6e-60 236.9 937 42.2
Lsat_1_v5_gn_9_24820 Lactuca sativa HOM05D005166 ORTHO05D006120 7.3e-60 236.5 233 63.9
ECA247G0723 Erigeron canadensis HOM05D005166 ORTHO05D006120 1.2e-59 235.7 291 54.0
Phvul.011G061700 Phaseolus vulgaris HOM05D005166 ORTHO05D006120 1.2e-59 235.7 247 58.3
VMungo1127G2033 Vigna mungo HOM05D005166 ORTHO05D006120 1.2e-59 235.7 247 57.9
Zm00001eb012100 Zea mays HOM05D005166 ORTHO05D006120 1.6e-59 235.3 298 53.7
SEGI_12829 Sequoiadendron giganteum HOM05D005166 ORTHO05D006120 3.6e-59 234.2 146 80.1
Sed0011931 Sechium edule HOM05D005166 ORTHO05D006120 4.7e-59 233.8 276 57.6
MBI14_g11598_MAGBIO Magnolia biondii HOM05D005166 ORTHO05D006120 8.0e-59 233.0 936 42.9
HPP92_012608 Vanilla planifolia HOM05D005166 ORTHO05D006120 8.0e-59 233.0 136 83.8
AT2G29210 Arabidopsis thaliana HOM05D005166 ORTHO05D006120 2.3e-58 231.5 268 55.6
Solyc09g030390.3 Solanum lycopersicum HOM05D005166 ORTHO05D006120 5.2e-58 230.3 941 44.0
Aa31LG5G7110 Aethionema arabicum HOM05D005166 ORTHO05D006120 6.8e-58 229.9 243 56.0
AUR62020041 Chenopodium quinoa HOM05D005166 ORTHO05D006120 2.6e-57 228.0 135 85.9
Thhalv10016250m.g Eutrema salsugineum HOM05D005166 ORTHO05D006120 2.6e-57 228.0 136 82.4
QL01p029224 Quercus lobata HOM05D005166 ORTHO05D006120 9.8e-57 226.1 920 42.0
Ah.08g220070 Amaranthus hybridus HOM05D005166 ORTHO05D006120 1.7e-56 225.3 269 56.5
Carub.0004s1023 Capsella rubella HOM05D005166 ORTHO05D006120 3.7e-56 224.2 134 82.1
DCAR_005942 Daucus carota HOM05D005166 ORTHO05D006120 3.7e-56 224.2 311 54.0
HanXRQChr08g0237471 Helianthus annuus HOM05D005166 ORTHO05D006120 6.4e-56 223.4 276 53.3
Sp4g12020 Schrenkiella parvula HOM05D005166 ORTHO05D006120 6.4e-56 223.4 273 53.8
vmacro03027 Vaccinium macrocarpon HOM05D005166 ORTHO05D006120 1.1e-55 222.6 989 41.3
BcaB02g10233 Brassica carinata HOM05D005166 ORTHO05D006120 3.2e-55 221.1 291 51.5
Pp3c3_30240 Physcomitrium patens HOM05D005166 ORTHO05D006120 9.2e-55 219.5 293 51.2
Pp3c3_30241 Physcomitrium patens HOM05D005166 ORTHO05D006120 9.2e-55 219.5 293 51.2
CiPaw.13G089200 Carya illinoinensis HOM05D005166 ORTHO05D006120 1.2e-54 219.2 904 41.0
Eucgr.B02307 Eucalyptus grandis HOM05D005166 ORTHO05D006120 2.0e-54 218.4 911 40.4
Atru.chr3.3993_Atru.chr3.3994 Acer truncatum HOM05D005166 ORTHO05D006120 2.7e-54 218.0 963 40.4
PSO339G5769 Papaver somniferum HOM05D005166 ORTHO05D006120 3.5e-54 217.6 895 40.6
arahy.Tifrunner.gnm1.ann1.SP769B Arachis hypogaea HOM05D005166 ORTHO05D006120 4.6e-54 217.2 291 51.2
C04p21810 Brassica napus HOM05D005166 ORTHO05D006120 1.0e-53 216.1 293 51.2
Cpa.g.sc81.97 Carica papaya HOM05D005166 ORTHO05D006120 2.3e-53 214.9 150 73.3
Potri.001G244600 Populus trichocarpa HOM05D005166 ORTHO05D006120 2.3e-53 214.9 877 41.6
HanXRQChr08g0237371 Helianthus annuus HOM05D005166 ORTHO05D006120 3.9e-53 214.2 289 50.9
Psat7g210320 Pisum sativum HOM05D005166 ORTHO05D006120 6.6e-53 213.4 918 38.7
Mapoly0063s0002 Marchantia polymorpha HOM05D005166 ORTHO05D006120 1.1e-52 212.6 131 78.6
BolC4t23701H Brassica oleracea HOM05D005166 ORTHO05D006120 1.9e-52 211.8 303 49.5
Ciclev10030390m.g Citrus clementina HOM05D005166 ORTHO05D006120 3.3e-52 211.1 881 41.9
CBR_g50691 Chara braunii HOM05D005166 ORTHO05D006120 7.3e-52 209.9 155 69.0
BraA05t20522Z Brassica rapa HOM05D005166 ORTHO05D006120 1.4e-50 205.7 311 49.5
AagrBONN_evm.TU.Sc2ySwM_117.3439 Anthoceros agrestis HOM05D005166 ORTHO05D006120 1.8e-50 205.3 296 47.3
Pp3c10_18390 Physcomitrium patens HOM05D005166 ORTHO05D006120 5.2e-50 203.8 286 50.3
Haze_24175 Corylus avellana HOM05D005166 ORTHO05D006120 1.2e-49 202.6 912 40.6
Medtr4g064740 Medicago truncatula HOM05D005166 ORTHO05D006120 1.2e-49 202.6 931 40.7
Haze_24170 Corylus avellana HOM05D005166 ORTHO05D006120 3.4e-49 201.1 907 40.1
FAN21G1054 Fragaria x ananassa HOM05D005166 ORTHO05D006120 4.4e-49 200.7 885 42.6
RcHm_v2.0_Chr5g0066361 Rosa chinensis HOM05D005166 ORTHO05D006120 4.4e-49 200.7 904 42.3
Aqoxy2G02310 Aquilegia oxysepala HOM05D005166 ORTHO05D006120 7.5e-49 199.9 946 41.8
A05p16120 Brassica napus HOM05D005166 ORTHO05D006120 9.8e-49 199.5 310 46.5
CDE06G0141 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 9.8e-49 199.5 113 85.8
TPR.G23607 Trifolium pratense HOM05D005166 ORTHO05D006120 1.3e-48 199.1 929 40.7
FAN25G3327 Fragaria x ananassa HOM05D005166 ORTHO05D006120 3.7e-48 197.6 897 42.4
SMO144G0189 Selaginella moellendorffii HOM05D005166 ORTHO05D006120 1.9e-47 195.3 137 70.8
SHI31247 Sapria himalayana HOM05D005166 ORTHO05D006120 3.2e-47 194.5 150 66.7
COL.COLO4_18578 Corchorus olitorius HOM05D005166 ORTHO05D006120 7.0e-47 193.4 883 41.9
SHI05908 Sapria himalayana HOM05D005166 ORTHO05D006120 7.0e-47 193.4 300 45.7
THA.LOC104800686 Tarenaya hassleriana HOM05D005166 ORTHO05D006120 7.0e-47 193.4 946 41.2
Sabra16G0148400 Salix brachista HOM05D005166 ORTHO05D006120 4.6e-46 190.7 838 42.0
Lj3g0025501 Lotus japonicus HOM05D005166 ORTHO05D006120 2.3e-45 188.3 905 39.8
ATR0559G187 Amborella trichopoda HOM05D005166 ORTHO05D006120 2.5e-44 184.9 918 37.3
FAN16G3680 Fragaria x ananassa HOM05D005166 ORTHO05D006120 5.6e-44 183.7 877 39.9
AUR62001736 Chenopodium quinoa HOM05D005166 ORTHO05D006120 3.6e-43 181.0 894 43.0
SalBow6G2010 Salvia bowleyana HOM05D005166 ORTHO05D006120 4.0e-42 177.6 418 44.0
Ca_20616_v3 Cicer arietinum L. HOM05D005166 ORTHO05D006120 5.2e-42 177.2 858 31.1
FvH4_3g36942 Fragaria vesca HOM05D005166 ORTHO05D006120 9.8e-41 172.9 885 41.1
Sed0000001 Sechium edule HOM05D005166 ORTHO05D006120 1.6e-38 165.6 234 53.0
PGR102G2168 Punica granatum HOM05D005166 ORTHO05D006120 4.6e-38 164.1 914 39.3
FAN11G2353 Fragaria x ananassa HOM05D005166 ORTHO05D006120 8.6e-37 159.8 885 40.1
SHI33547 Sapria himalayana HOM05D005166 ORTHO05D006120 1.2e-35 156.0 131 61.1
BcaB05g22029 Brassica carinata HOM05D005166 ORTHO05D006120 4.4e-33 147.5 117 65.0
Sc12g0001240 Simmondsia chinensis HOM05D005166 ORTHO05D006120 8.4e-32 143.3 931 39.8
SHI32778 Sapria himalayana HOM05D005166 ORTHO05D006120 9.2e-31 139.8 134 59.0
Oeu053892.1 Olea europaea HOM05D005166 ORTHO05D006120 2.3e-29 135.2 372 41.4
SHI25075 Sapria himalayana HOM05D005166 ORTHO05D006120 1.8e-26 125.6 111 59.5
SHI07724 Sapria himalayana HOM05D005166 ORTHO05D006120 3.1e-26 124.8 166 45.8
Cre16.g678050 Chlamydomonas reinhardtii HOM05D005166 ORTHO05D006120 8.9e-26 123.2 149 49.0
unitig_746.g26715 Utricularia gibba HOM05D005166 ORTHO05D006120 4.4e-25 120.9 796 26.1
MCO11G283 Micromonas commoda HOM05D005166 ORTHO05D006120 2.4e-23 115.2 127 48.8
Zm00001eb397830 Zea mays HOM05D005166 ORTHO05D006120 2.9e-16 91.7 67 73.1
Zm00001eb284680 Zea mays HOM05D005166 ORTHO05D006120 2.7e-14 85.1 66 71.2
Actinidia33768 Actinidia chinensis HOM05D005166 ORTHO05D006120 2.3e-13 82.0 670 38.1
Zm00001eb222410 Zea mays HOM05D005166 ORTHO05D006120 3.0e-13 81.6 57 71.9
HanXRQChr08g0237461 Helianthus annuus HOM05D005166 ORTHO05D006120 3.1e-10 71.6 50 72.0
PRCOL_00003490 Prasinoderma coloniale HOM05D005166 ORTHO05D006120 9.9e-09 66.6 108 35.2
Cpa.g.sc81.96 Carica papaya HOM05D005166 ORTHO05D006120 1.2e-06 59.7 428 30.1


User provided reference genes

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