Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 3.4e-107 391.7 203 100.0
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 4.6e-32 142.1 205 50.7
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 6.9e-28 128.3 207 46.4
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 5.0e-26 122.1 204 43.1
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 8.4e-26 121.3 204 43.1
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 1.4e-25 120.6 198 43.4
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 1.4e-25 120.6 198 43.4
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 1.4e-25 120.6 198 43.4
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 2.5e-25 119.8 200 43.5
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 5.5e-25 118.6 176 46.6
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 7.2e-25 118.2 204 43.6
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 1.6e-24 117.1 208 43.3
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 3.5e-24 115.9 208 42.8
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 3.0e-23 112.8 166 46.4
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 5.1e-23 112.1 168 48.8
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 5.1e-23 112.1 195 41.0
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 6.7e-23 111.7 201 43.8
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 1.5e-22 110.5 170 45.3
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 2.5e-22 109.8 203 42.9
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 1.3e-21 107.5 152 49.3
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.6e-21 107.1 151 51.0
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 2.2e-21 106.7 143 51.0
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 2.2e-21 106.7 171 45.0
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 3.7e-21 105.9 201 43.8
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 1.1e-20 104.4 165 44.8
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 1.4e-20 104.0 198 40.4
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 1.8e-20 103.6 202 42.1
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 1.8e-20 103.6 205 40.0
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 2.4e-20 103.2 202 38.1
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 5.3e-20 102.1 197 37.6
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 6.9e-20 101.7 197 38.6
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.2e-19 100.9 194 38.7
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.2e-19 100.9 194 38.7
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 1.2e-19 100.9 207 41.1
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.5e-19 100.5 197 38.1
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.5e-19 100.5 200 41.0
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 1.0e-18 97.8 123 49.6
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 2.9e-18 96.3 121 51.2
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 2.9e-18 96.3 140 49.3
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 5.0e-18 95.5 167 43.1
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 1.1e-17 94.4 121 50.4
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 1.4e-17 94.0 198 42.4
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 1.9e-17 93.6 196 38.8
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 2.5e-17 93.2 185 37.8
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 4.2e-17 92.4 138 44.2
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.2e-16 90.9 135 47.4
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 2.1e-16 90.1 194 40.7
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 2.7e-16 89.7 200 38.0
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 4.6e-16 89.0 192 41.7
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 7.9e-16 88.2 119 51.3
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 7.9e-16 88.2 125 50.4
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 7.9e-16 88.2 188 37.8
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 7.9e-16 88.2 207 38.2
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 1.0e-15 87.8 179 40.8
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 3.9e-15 85.9 196 37.2
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 3.9e-15 85.9 200 37.0
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 5.1e-15 85.5 194 39.2
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.5e-14 84.0 169 40.2
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.5e-14 84.0 169 40.2
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 2.0e-14 83.6 202 37.6
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 3.3e-14 82.8 147 42.2
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 7.4e-14 81.6 141 44.7
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 9.7e-14 81.3 182 37.9
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 1.7e-13 80.5 196 33.7
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 1.7e-13 80.5 123 44.7
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 2.2e-13 80.1 196 33.7
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 2.2e-13 80.1 196 33.7
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 2.8e-13 79.7 107 46.7
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 2.8e-13 79.7 156 39.1
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 2.8e-13 79.7 141 41.8
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 3.7e-13 79.3 107 45.8
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 3.7e-13 79.3 212 39.2
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 6.3e-13 78.6 142 43.0
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 8.2e-13 78.2 182 38.5
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 1.1e-12 77.8 136 41.9
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 1.4e-12 77.4 194 37.6
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 1.4e-12 77.4 111 44.1
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 2.4e-12 76.6 141 42.6
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 3.1e-12 76.3 106 48.1
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 4.1e-12 75.9 141 40.4
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 2.6e-11 73.2 142 43.7
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 2.6e-11 73.2 227 34.8
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.4e-11 72.8 139 40.3
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 1.3e-10 70.9 55 67.3
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 3.8e-10 69.3 132 42.4
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 5.0e-10 68.9 136 39.7
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 5.0e-10 68.9 115 45.2
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 5.0e-10 68.9 134 41.0
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 6.5e-10 68.6 194 35.1
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 8.5e-10 68.2 140 37.9
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.9e-09 67.0 125 44.8
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 3.2e-09 66.2 200 31.5
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 3.2e-09 66.2 98 48.0
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 4.2e-09 65.9 166 37.3
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 4.2e-09 65.9 169 34.9
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 3.6e-08 62.8 206 35.0
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 7.9e-08 61.6 110 41.8
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 5.1e-07 58.9 200 31.0
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 1.1e-06 57.8 122 40.2


User provided reference genes

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