Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31512 Striga asiatica HOM05D005870 ORTHO05D007216 5.4e-67 257.7 145 100.0
Migut.H02353 Erythranthe guttata HOM05D005870 ORTHO05D007216 4.3e-32 141.7 118 70.3
SGA_v2.0_scaffold54G19505 Striga asiatica HOM05D005870 ORTHO05D007216 3.1e-30 135.6 109 73.4
MSTRG.3774 Avicennia marina HOM05D005870 ORTHO05D007216 9.0e-30 134.0 118 69.5
Dinv13195 Davidia involucrata HOM05D005870 ORTHO05D007216 1.6e-26 123.2 119 63.9
SalBow3G2704 Salvia bowleyana HOM05D005870 ORTHO05D007216 4.6e-26 121.7 118 62.7
Atru.chr4.42 Acer truncatum HOM05D005870 ORTHO05D007216 1.9e-24 116.3 122 59.0
Aa31LG1G16740 Aethionema arabicum HOM05D005870 ORTHO05D007216 2.5e-24 115.9 119 60.5
Thecc.01G100700 Theobroma cacao HOM05D005870 ORTHO05D007216 3.3e-24 115.5 129 57.4
COL.COLO4_27254 Corchorus olitorius HOM05D005870 ORTHO05D007216 5.6e-24 114.8 122 59.8
THA.LOC104801696 Tarenaya hassleriana HOM05D005870 ORTHO05D007216 5.6e-24 114.8 109 61.5
unitig_747.g21825 Utricularia gibba HOM05D000660 ORTHO05D000766 5.6e-24 114.8 133 53.4
Nitab4.5_0006110g0010 Nicotiana tabacum HOM05D005870 ORTHO05D007216 9.6e-24 114.0 119 63.0
TWI74G0695 Tripterygium wilfordii HOM05D005870 ORTHO05D007216 1.6e-23 113.2 121 60.3
CiPaw.04G100500 Carya illinoinensis HOM05D005870 ORTHO05D007216 3.7e-23 112.1 117 57.3
HanXRQChr15g0484171 Helianthus annuus HOM05D005870 ORTHO05D007216 4.8e-23 111.7 112 61.6
Nitab4.5_0000430g0130 Nicotiana tabacum HOM05D005870 ORTHO05D007216 4.8e-23 111.7 120 62.5
MBI02_g35763_MAGBIO Magnolia biondii HOM05D005870 ORTHO05D007216 8.2e-23 110.9 116 62.1
Lsat_1_v5_gn_4_141420 Lactuca sativa HOM05D005870 ORTHO05D007216 1.1e-22 110.5 110 60.9
MD00G1199600 Malus domestica HOM05D005870 ORTHO05D007216 1.1e-22 110.5 114 62.3
Hma1.2p1_0308F.1_g120250 Hydrangea macrophylla HOM05D005870 ORTHO05D007216 1.4e-22 110.2 127 60.6
Nitab4.5_0004855g0010 Nicotiana tabacum HOM05D005870 ORTHO05D007216 1.4e-22 110.2 121 61.2
CDE10G0428 Ceratophyllum demersum HOM05D005870 ORTHO05D007216 1.8e-22 109.8 116 55.2
vmacro07307 Vaccinium macrocarpon HOM05D005870 ORTHO05D007216 1.8e-22 109.8 127 55.9
CDE10G0106 Ceratophyllum demersum HOM05D005870 ORTHO05D007216 2.4e-22 109.4 116 54.3
Nn5g30105 Nelumbo nucifera HOM05D005870 ORTHO05D007216 2.4e-22 109.4 120 59.2
Solyc03g097950.4 Solanum lycopersicum HOM05D005870 ORTHO05D007216 2.4e-22 109.4 125 58.4
Nn1g05359 Nelumbo nucifera HOM05D005870 ORTHO05D007216 3.1e-22 109.0 116 57.8
Actinidia20008 Actinidia chinensis HOM05D005870 ORTHO05D007216 4.0e-22 108.6 118 59.3
BcaC01g02758 Brassica carinata HOM05D005870 ORTHO05D007216 4.0e-22 108.6 116 56.0
BolC3t18343H Brassica oleracea HOM05D005870 ORTHO05D007216 4.0e-22 108.6 116 56.0
Nitab4.5_0000033g0220 Nicotiana tabacum HOM05D005870 ORTHO05D007216 4.0e-22 108.6 121 60.3
Rhsim10G0163500 Rhododendron simsii HOM05D005870 ORTHO05D007216 4.0e-22 108.6 97 68.0
C03p60860 Brassica napus HOM05D005870 ORTHO05D007216 6.9e-22 107.8 116 56.0
TWI53G1299 Tripterygium wilfordii HOM05D005870 ORTHO05D007216 6.9e-22 107.8 120 58.3
Duzib187G0334 Durio zibethinus HOM05D005870 ORTHO05D007216 9.0e-22 107.5 129 56.6
Oeu002170.1 Olea europaea HOM05D005870 ORTHO05D007216 9.0e-22 107.5 121 57.9
Cfa002651 Carpinus fangiana HOM05D005870 ORTHO05D007216 1.5e-21 106.7 108 59.3
MSTRG.15716 Avicennia marina HOM05D005870 ORTHO05D007216 2.0e-21 106.3 110 62.7
A02p43790 Brassica napus HOM05D005870 ORTHO05D007216 2.0e-21 106.3 96 62.5
BraA02t09303Z Brassica rapa HOM05D005870 ORTHO05D007216 2.0e-21 106.3 96 62.5
QL06p049269 Quercus lobata HOM05D005870 ORTHO05D007216 2.0e-21 106.3 121 57.0
Sopen03g028660 Solanum pennellii HOM05D005870 ORTHO05D007216 3.4e-21 105.5 122 59.0
Haze_24920 Corylus avellana HOM05D005870 ORTHO05D007216 4.5e-21 105.1 117 53.8
Duzib147G1590 Durio zibethinus HOM05D005870 ORTHO05D007216 5.8e-21 104.8 113 54.9
Prupe.6G188000 Prunus persica HOM05D005870 ORTHO05D007216 5.8e-21 104.8 113 58.4
Sp2g28320 Schrenkiella parvula HOM05D005870 ORTHO05D007216 5.8e-21 104.8 121 56.2
Solyc06g072470.4 Solanum lycopersicum HOM05D005870 ORTHO05D007216 5.8e-21 104.8 128 54.7
Ca_17742_v3 Cicer arietinum L. HOM05D005870 ORTHO05D007216 7.6e-21 104.4 118 55.1
Gohir.A11G202300 Gossypium hirsutum HOM05D005870 ORTHO05D007216 7.6e-21 104.4 106 58.5
Gohir.D11G220900 Gossypium hirsutum HOM05D005870 ORTHO05D007216 7.6e-21 104.4 106 58.5
Gorai.007G237100 Gossypium raimondii HOM05D005870 ORTHO05D007216 7.6e-21 104.4 106 58.5
MD01G1031300 Malus domestica HOM05D005870 ORTHO05D007216 7.6e-21 104.4 114 59.6
Ciclev10026623m.g Citrus clementina HOM05D005870 ORTHO05D007216 1.0e-20 104.0 124 52.4
Actinidia06560 Actinidia chinensis HOM05D005870 ORTHO05D007216 1.3e-20 103.6 111 59.5
Peaxi162Scf00171g00927 Petunia axillaris HOM05D005870 ORTHO05D007216 1.7e-20 103.2 117 60.7
PGSC0003DMG400033691 Solanum tuberosum HOM05D005870 ORTHO05D007216 1.7e-20 103.2 121 59.5
Lj2A546G34 Lonicera japonica HOM05D005870 ORTHO05D007216 2.2e-20 102.8 115 57.4
PGR004G1211 Punica granatum HOM05D005870 ORTHO05D007216 2.2e-20 102.8 120 56.7
Aqoxy6G00780 Aquilegia oxysepala HOM05D005870 ORTHO05D007216 2.9e-20 102.4 125 52.8
CsaV3_4G008900 Cucumis sativus L. HOM05D005870 ORTHO05D007216 2.9e-20 102.4 120 55.8
Medtr8g090185 Medicago truncatula HOM05D005870 ORTHO05D007216 2.9e-20 102.4 103 59.2
Sopen06g028840 Solanum pennellii HOM05D005870 ORTHO05D007216 2.9e-20 102.4 119 58.0
BcaB02g09886 Brassica carinata HOM05D005870 ORTHO05D007216 3.8e-20 102.1 119 55.5
BcaB07g34228 Brassica carinata HOM05D005870 ORTHO05D007216 3.8e-20 102.1 116 55.2
CANSAT01G0848 Cannabis sativa HOM05D005870 ORTHO05D007216 3.8e-20 102.1 110 58.2
AUR62003803 Chenopodium quinoa HOM05D005870 ORTHO05D007216 3.8e-20 102.1 117 59.0
Sed0015800 Sechium edule HOM05D005870 ORTHO05D007216 3.8e-20 102.1 120 55.8
arahy.Tifrunner.gnm1.ann1.K43FII Arachis hypogaea HOM05D005870 ORTHO05D007216 4.9e-20 101.7 115 53.0
arahy.Tifrunner.gnm1.ann1.Q6429D Arachis hypogaea HOM05D005870 ORTHO05D007216 4.9e-20 101.7 115 53.0
TAR381G0757 Trochodendron aralioides HOM05D005870 ORTHO05D007216 6.5e-20 101.3 120 59.2
PGSC0003DMG400026946 Solanum tuberosum HOM05D005870 ORTHO05D007216 1.4e-19 100.1 110 59.1
Carub.0008s2608 Capsella rubella HOM05D005870 ORTHO05D007216 1.9e-19 99.8 97 59.8
ClCG10G008830 Citrullus lanatus HOM05D005870 ORTHO05D007216 1.9e-19 99.8 120 54.2
ECA232G4208 Erigeron canadensis HOM05D005870 ORTHO05D007216 1.9e-19 99.8 124 52.4
Thhalv10005022m.g Eutrema salsugineum HOM05D005870 ORTHO05D007216 1.9e-19 99.8 119 54.6
AT5G65220 Arabidopsis thaliana HOM05D005870 ORTHO05D007216 2.5e-19 99.4 121 54.5
AL8G42760 Arabidopsis lyrata HOM05D005870 ORTHO05D007216 3.2e-19 99.0 96 59.4
CAN.G65.97 Capsicum annuum HOM05D005870 ORTHO05D007216 3.2e-19 99.0 120 59.2
Cpa.g.sc615.2 Carica papaya HOM05D005870 ORTHO05D007216 4.2e-19 98.6 119 54.6
DCAR_014215 Daucus carota HOM05D005870 ORTHO05D007216 4.2e-19 98.6 118 54.2
FAN23G0590 Fragaria x ananassa HOM05D005870 ORTHO05D007216 5.5e-19 98.2 116 55.2
EL10Ac6g15115 Beta vulgaris HOM05D005870 ORTHO05D007216 7.1e-19 97.8 109 58.7
A06p32070 Brassica napus HOM05D005870 ORTHO05D007216 7.1e-19 97.8 119 54.6
BraA06t26136Z Brassica rapa HOM05D005870 ORTHO05D007216 7.1e-19 97.8 119 54.6
Sabra07G0077600 Salix brachista HOM05D005870 ORTHO05D007216 7.1e-19 97.8 128 53.9
Sc03g0002050 Simmondsia chinensis HOM05D005870 ORTHO05D007216 7.1e-19 97.8 116 56.0
Potri.007G093700 Populus trichocarpa HOM05D005870 ORTHO05D007216 9.3e-19 97.4 115 56.5
TPR.G6297 Trifolium pratense HOM05D005870 ORTHO05D007216 1.2e-18 97.1 117 49.6
Manes.13G093516 Manihot esculenta HOM05D005870 ORTHO05D007216 1.6e-18 96.7 119 55.5
Phvul.002G256700 Phaseolus vulgaris HOM05D005870 ORTHO05D007216 1.6e-18 96.7 117 53.0
HPP92_013107 Vanilla planifolia HOM05D005870 ORTHO05D007216 1.6e-18 96.7 97 55.7
CARHR279150 Cardamine hirsuta HOM05D005870 ORTHO05D007216 2.1e-18 96.3 120 53.3
Cc07_g15090 Coffea canephora HOM05D005870 ORTHO05D007216 4.6e-18 95.1 125 54.4
VMungo0251G1964 Vigna mungo HOM05D005870 ORTHO05D007216 4.6e-18 95.1 117 52.1
Glyma.05G178000 Glycine max HOM05D005870 ORTHO05D007216 7.9e-18 94.4 116 51.7
RcHm_v2.0_Chr2g0113161 Rosa chinensis HOM05D005870 ORTHO05D007216 7.9e-18 94.4 113 54.9
MBI05_g37050_MAGBIO Magnolia biondii HOM05D005870 ORTHO05D007216 1.3e-17 93.6 61 80.3
Glyma.08G135000 Glycine max HOM05D005870 ORTHO05D007216 2.3e-17 92.8 116 51.7
Lj4g0027302 Lotus japonicus HOM05D005870 ORTHO05D007216 3.0e-17 92.4 117 51.3
PSO447G0167 Papaver somniferum HOM05D005870 ORTHO05D007216 8.7e-17 90.9 111 50.5
FvH4_1g20710 Fragaria vesca HOM05D005870 ORTHO05D007216 1.1e-16 90.5 113 53.1
Lalb_Chr12g0203881 Lupinus albus HOM05D005870 ORTHO05D007216 1.1e-16 90.5 125 52.0
Eucgr.I00441 Eucalyptus grandis HOM05D005870 ORTHO05D007216 1.5e-16 90.1 99 55.6
FAN26G0235 Fragaria x ananassa HOM05D005870 ORTHO05D007216 1.9e-16 89.7 116 51.7
PSO210G6840 Papaver somniferum HOM05D005870 ORTHO05D007216 1.9e-16 89.7 111 49.5
FAN19G2750 Fragaria x ananassa HOM05D005870 ORTHO05D007216 3.3e-16 89.0 113 53.1
FAN28G1626 Fragaria x ananassa HOM05D005870 ORTHO05D007216 4.3e-16 88.6 116 50.9
HPP92_013094 Vanilla planifolia HOM05D005870 ORTHO05D007216 1.3e-15 87.0 78 59.0
Os02g0754300 Oryza sativa ssp. japonica HOM05D005870 ORTHO05D007216 3.7e-15 85.5 77 62.3
Psat7g055240 Pisum sativum HOM05D005870 ORTHO05D007216 3.7e-15 85.5 119 47.1
MELO3C018954.2 Cucumis melo HOM05D005870 ORTHO05D007216 6.3e-15 84.7 118 47.5
Lalb_Chr07g0185191 Lupinus albus HOM05D005870 ORTHO05D007216 8.2e-15 84.3 115 47.0
ATR0782G037 Amborella trichopoda HOM05D005870 ORTHO05D007216 1.1e-14 84.0 103 57.3
AUR62001999 Chenopodium quinoa HOM05D005870 ORTHO05D007216 9.0e-14 80.9 117 50.4
Zm00001eb255290 Zea mays HOM05D005870 ORTHO05D007216 1.2e-13 80.5 64 67.2
Hund16294 Selenicereus undatus HOM05D005870 ORTHO05D007216 2.6e-13 79.3 104 53.8
Zm00001eb249540 Zea mays HOM05D005870 ORTHO05D007216 3.4e-13 79.0 64 62.5
Zm00001eb335180 Zea mays HOM05D005870 ORTHO05D007216 2.9e-12 75.9 64 59.4
Zm00001eb194130 Zea mays HOM05D005870 ORTHO05D007216 5.0e-12 75.1 59 64.4
Hund13620 Selenicereus undatus HOM05D005870 ORTHO05D007216 4.2e-11 72.0 112 49.1
Mapoly0011s0026 Marchantia polymorpha HOM05D005870 ORTHO05D007216 3.6e-10 68.9 95 42.1
Pp3c9_19800 Physcomitrium patens HOM05D005870 ORTHO05D007216 2.3e-09 66.2 64 54.7
AagrBONN_evm.TU.Sc2ySwM_117.2528 Anthoceros agrestis HOM05D005870 ORTHO05D007216 1.3e-07 60.5 76 44.7
SMO347G0042 Selaginella moellendorffii HOM05D005870 ORTHO05D007216 4.1e-06 55.5 64 43.8


User provided reference genes

Program Settings