Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 5.1e-218 760.8 379 100.0
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 9.6e-124 447.6 398 62.1
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 3.8e-104 382.5 396 53.3
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 1.6e-102 377.1 408 51.2
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 5.1e-101 372.1 426 52.1
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 7.4e-100 368.2 405 50.9
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 3.7e-99 365.9 354 55.9
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 1.1e-98 364.4 405 52.1
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 1.4e-98 364.0 398 51.0
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 6.9e-98 361.7 405 51.9
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 9.1e-98 361.3 394 51.0
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 7.7e-97 358.2 392 50.8
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 1.3e-96 357.5 398 50.3
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 1.3e-96 357.5 396 51.8
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 1.7e-96 357.1 398 51.3
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 1.7e-96 357.1 395 51.6
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 2.9e-96 356.3 404 49.8
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 6.5e-96 355.1 399 49.1
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 1.1e-95 354.4 404 50.2
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 1.4e-95 354.0 401 49.9
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 5.5e-95 352.1 404 49.8
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 4.7e-94 349.0 393 48.3
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 7.9e-94 348.2 393 49.4
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 1.0e-93 347.8 401 49.1
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 1.0e-93 347.8 394 50.3
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 1.4e-93 347.4 398 49.2
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 1.4e-93 347.4 390 50.0
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 5.1e-93 345.5 398 49.2
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 5.1e-93 345.5 399 50.1
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 6.7e-93 345.1 374 53.5
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 8.8e-93 344.7 392 50.3
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 8.8e-93 344.7 405 47.9
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 8.8e-93 344.7 395 48.9
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 1.3e-91 340.9 405 47.4
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 4.8e-91 339.0 393 49.4
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 4.1e-90 335.9 405 48.1
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 5.3e-90 335.5 400 46.0
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 5.3e-90 335.5 355 53.0
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 1.2e-89 334.3 402 46.5
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 1.5e-89 334.0 401 45.9
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 2.0e-89 333.6 403 46.7
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 3.4e-89 332.8 404 46.3
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 3.4e-89 332.8 414 45.9
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 1.3e-88 330.9 407 44.7
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 6.5e-88 328.6 408 44.9
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 1.9e-87 327.0 409 44.3
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 4.2e-87 325.9 441 44.7
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 2.1e-86 323.6 397 49.6
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 3.6e-86 322.8 406 45.1
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 3.0e-85 319.7 415 45.5
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 8.8e-85 318.2 347 50.4
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 1.1e-84 317.8 428 46.3
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 5.7e-84 315.5 455 42.9
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 9.7e-84 314.7 303 56.4
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 1.7e-83 313.9 412 45.1
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 2.2e-83 313.5 392 44.9
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 2.8e-83 313.2 403 46.2
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 3.7e-83 312.8 411 45.3
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 1.1e-82 311.2 437 43.2
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 4.1e-82 309.3 423 45.4
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 1.7e-80 303.9 391 46.0
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 1.7e-80 303.9 474 42.6
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 2.9e-80 303.1 526 38.8
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 8.5e-80 301.6 288 58.3
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 2.0e-76 290.4 292 52.4
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 5.7e-76 288.9 384 44.0
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 1.3e-75 287.7 302 53.6
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 1.4e-74 284.3 421 41.6
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 7.0e-74 282.0 311 52.4
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 1.2e-73 281.2 305 53.4
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 2.7e-73 280.0 326 49.7
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 4.5e-73 279.3 326 49.7
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 5.9e-73 278.9 315 50.8
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 6.5e-72 275.4 302 51.3
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 1.5e-71 274.2 400 42.8
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 2.5e-71 273.5 285 50.2
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 9.4e-71 271.6 424 41.3
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.6e-70 270.8 306 50.0
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 3.6e-70 269.6 283 54.1
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 4.7e-70 269.2 285 50.2
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 1.8e-69 267.3 392 41.8
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 1.2e-68 264.6 422 40.0
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 8.3e-67 258.5 303 48.2
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 2.4e-66 256.9 282 50.7
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 5.4e-66 255.8 309 46.9
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 2.0e-65 253.8 307 50.5
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 2.0e-65 253.8 398 39.9
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 2.9e-64 250.0 309 46.9
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 1.6e-62 244.2 389 41.1
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 8.0e-62 241.9 418 38.3
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.8e-61 240.7 333 43.5
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 4.9e-59 232.6 309 45.3
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 1.4e-58 231.1 294 43.9
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 2.4e-58 230.3 450 37.1
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 5.0e-56 222.6 545 32.1
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 4.4e-52 209.5 277 44.8
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 4.1e-50 203.0 264 45.5
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 1.6e-49 201.1 458 32.8
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 4.3e-47 193.0 260 45.4
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 6.2e-46 189.1 372 35.8
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 5.2e-45 186.0 318 38.4
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 6.8e-45 185.7 416 34.9
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 2.2e-43 180.6 300 39.7
CARHR202980 Cardamine hirsuta HOM05D006096 ORTHO05D007775 7.0e-42 175.6 257 41.2
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 2.7e-41 173.7 400 34.5
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 2.3e-40 170.6 157 55.4
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 6.8e-37 159.1 266 36.1
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 3.9e-32 143.3 181 46.4
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 4.3e-31 139.8 208 39.9
BcaB02g08416 Brassica carinata HOM05D006096 ORTHO05D007775 6.6e-24 115.9 88 64.8
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 1.6e-22 111.3 173 37.6
SEGI_01830 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 9.0e-21 105.5 114 50.0
Cre17.g719050 Chlamydomonas reinhardtii HOM05D006096 ORTHO05D007775 1.7e-16 91.3 204 34.8
GSVIVG01006632001 Vitis vinifera HOM05D006096 ORTHO05D007775 6.6e-16 89.4 61 68.9
Cc03_g11790 Coffea canephora HOM05D006096 ORTHO05D007775 1.5e-15 88.2 163 33.7
Gohir.D10G103800 Gossypium hirsutum HOM05D006096 ORTHO05D007775 5.6e-15 86.3 61 63.9
QL06p048511 Quercus lobata HOM05D006096 ORTHO05D007775 3.6e-14 83.6 66 57.6
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 2.4e-13 80.9 208 33.2
Ah.02g123840 Amaranthus hybridus HOM05D006096 ORTHO05D007775 3.1e-13 80.5 61 62.3
Carub.0006s0878 Capsella rubella HOM05D006096 ORTHO05D007775 4.6e-09 66.6 85 44.7
SEGI_02986 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 4.6e-09 66.6 63 46.0
Nitab4.5_0004570g0030 Nicotiana tabacum HOM05D006096 ORTHO05D007775 7.9e-09 65.9 75 45.3
CsaV3_UNG160180 Cucumis sativus L. HOM05D006096 ORTHO05D007775 9.6e-07 58.9 82 40.2
CsaV3_UNG124970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 2.1e-06 57.8 66 43.9


User provided reference genes

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