Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 2.1e-121 439.1 230 100.0
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 3.8e-75 285.4 238 66.8
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 6.1e-65 251.5 235 58.3
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 4.4e-63 245.4 214 62.1
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 5.7e-63 245.0 233 58.8
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 5.7e-63 245.0 232 58.6
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 5.7e-63 245.0 232 58.2
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 1.3e-62 243.8 231 63.2
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 2.8e-62 242.7 240 56.2
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 2.0e-60 236.5 233 57.9
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 2.7e-60 236.1 220 60.9
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 2.7e-60 236.1 246 55.7
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 4.5e-60 235.3 241 57.3
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 4.5e-60 235.3 232 56.0
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 1.7e-59 233.4 231 57.6
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 1.7e-59 233.4 232 55.2
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 2.3e-59 233.0 233 54.9
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 2.9e-59 232.6 241 56.4
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 6.6e-59 231.5 250 56.0
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 8.6e-59 231.1 240 55.4
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 8.6e-59 231.1 241 57.3
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 1.5e-58 230.3 214 59.8
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 2.5e-58 229.6 207 59.4
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 3.3e-58 229.2 230 56.5
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 3.3e-58 229.2 241 56.4
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 3.3e-58 229.2 225 57.3
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 4.3e-58 228.8 230 55.7
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 5.6e-58 228.4 247 54.3
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 7.3e-58 228.0 194 61.9
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 9.5e-58 227.6 236 55.9
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 1.6e-57 226.9 232 53.0
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 1.6e-57 226.9 229 55.0
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 2.1e-57 226.5 234 55.6
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 3.6e-57 225.7 233 55.8
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 4.7e-57 225.3 198 58.1
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 4.7e-57 225.3 237 53.6
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 1.4e-56 223.8 229 54.6
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 1.8e-56 223.4 198 57.6
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 2.3e-56 223.0 193 59.6
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 3.1e-56 222.6 188 59.0
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 3.1e-56 222.6 163 67.5
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 6.8e-56 221.5 232 52.6
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 8.9e-56 221.1 180 67.2
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 1.5e-55 220.3 226 53.5
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 2.0e-55 219.9 193 59.1
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 2.6e-55 219.5 234 54.7
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 3.4e-55 219.2 228 55.3
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 3.4e-55 219.2 236 52.1
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 3.4e-55 219.2 216 55.1
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 4.4e-55 218.8 233 54.9
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 7.5e-55 218.0 230 53.9
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 9.8e-55 217.6 231 53.2
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 1.7e-54 216.9 230 52.6
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.2e-54 216.5 230 53.5
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 4.9e-54 215.3 228 53.9
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 6.4e-54 214.9 201 56.7
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 1.9e-53 213.4 229 51.5
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 1.9e-53 213.4 231 55.0
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 3.2e-53 212.6 235 52.3
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 5.4e-53 211.8 230 53.0
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 9.2e-53 211.1 298 47.3
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.7e-52 209.5 217 54.8
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 6.0e-52 208.4 204 54.4
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 7.8e-52 208.0 193 56.5
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 3.0e-51 206.1 222 50.9
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 3.0e-51 206.1 194 56.2
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 6.6e-51 204.9 216 53.7
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 8.6e-51 204.5 176 65.3
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 5.6e-50 201.8 230 50.9
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 6.2e-49 198.4 194 54.1
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 1.1e-48 197.6 194 53.6
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 1.1e-48 197.6 194 53.6
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 1.1e-48 197.6 189 59.3
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 1.8e-48 196.8 194 54.1
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 2.3e-48 196.4 196 55.6
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 5.2e-48 195.3 194 52.6
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 2.0e-47 193.4 215 55.8
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 2.0e-47 193.4 164 62.2
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 4.4e-47 192.2 194 52.6
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 4.4e-47 192.2 194 53.1
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 1.4e-45 187.2 204 54.4
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 5.4e-45 185.3 193 50.8
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.5e-42 176.4 206 51.5
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 5.6e-42 175.3 206 51.0
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 1.2e-41 174.1 230 47.4
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.2e-41 174.1 229 45.9
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 8.9e-40 167.9 173 48.6
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 3.7e-38 162.5 187 46.0
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 4.9e-38 162.2 118 64.4
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 6.4e-38 161.8 226 44.2
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.7e-36 156.4 216 45.8
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 4.6e-36 155.6 197 48.7
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 6.6e-35 151.8 182 48.4
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 4.0e-32 142.5 194 41.8
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 3.4e-31 139.4 205 43.4
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 3.4e-31 139.4 169 40.8
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 1.1e-29 134.4 100 65.0
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.1e-28 130.2 132 53.8
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 5.6e-26 122.1 89 68.5
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 1.4e-21 107.5 90 56.7
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.0e-19 101.3 95 55.8
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 1.7e-19 100.5 93 57.0
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 3.9e-19 99.4 236 32.6
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 1.5e-18 97.4 109 50.5
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 1.9e-13 80.5 106 52.8
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 5.3e-08 62.4 53 52.8
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 2.6e-07 60.1 43 60.5


User provided reference genes

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