Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31481 Striga asiatica HOM05D007942 ORTHO05D010045 2.4e-66 255.4 131 100.0
SalBow8G0610 Salvia bowleyana HOM05D007942 ORTHO05D010045 1.8e-21 106.3 83 63.9
Migut.E01201 Erythranthe guttata HOM05D007942 ORTHO05D010045 2.9e-19 99.0 83 61.4
Solyc08g081455.1 Solanum lycopersicum HOM05D007942 ORTHO05D010045 2.9e-19 99.0 75 60.0
PGSC0003DMG400012189 Solanum tuberosum HOM05D007942 ORTHO05D010045 6.5e-19 97.8 75 58.7
Nitab4.5_0000769g0190 Nicotiana tabacum HOM05D007942 ORTHO05D010045 2.5e-18 95.9 73 56.2
Sopen08g029790 Solanum pennellii HOM05D007942 ORTHO05D010045 2.5e-18 95.9 75 58.7
Nitab4.5_0002282g0090 Nicotiana tabacum HOM05D007942 ORTHO05D010045 5.5e-18 94.7 73 56.2
CAN.G532.20 Capsicum annuum HOM05D007942 ORTHO05D010045 1.6e-17 93.2 60 68.3
Peaxi162Scf00074g01832 Petunia axillaris HOM05D007942 ORTHO05D010045 1.5e-15 86.7 60 65.0
Cc03_g15820 Coffea canephora HOM05D007942 ORTHO05D010045 1.8e-13 79.7 79 46.8
Cc08_g15120 Coffea canephora HOM05D007942 ORTHO05D010045 1.8e-13 79.7 79 46.8
Ciclev10023096m.g Citrus clementina HOM05D007942 ORTHO05D010045 2.6e-12 75.9 84 47.6
MD06G1089100 Malus domestica HOM05D007942 ORTHO05D010045 1.0e-11 73.9 77 50.6
Thecc.03G284800 Theobroma cacao HOM05D007942 ORTHO05D010045 1.0e-11 73.9 84 45.2
AL7G29970 Arabidopsis lyrata HOM05D007942 ORTHO05D010045 3.8e-11 72.0 81 44.4
BcaNung01050 Brassica carinata HOM05D007942 ORTHO05D010045 6.5e-11 71.2 80 43.8
AUR62010730 Chenopodium quinoa HOM05D007942 ORTHO05D010045 6.5e-11 71.2 79 43.0
Hund11441 Selenicereus undatus HOM05D007942 ORTHO05D010045 6.5e-11 71.2 79 48.1
Thhalv10026690m.g Eutrema salsugineum HOM05D007942 ORTHO05D010045 8.4e-11 70.9 70 48.6
Prupe.5G105000 Prunus persica HOM05D007942 ORTHO05D010045 1.4e-10 70.1 79 43.0
GSVIVG01019402001 Vitis vinifera HOM05D007942 ORTHO05D010045 1.4e-10 70.1 83 39.8
BcaC09g50992 Brassica carinata HOM05D007942 ORTHO05D010045 1.9e-10 69.7 80 42.5
Dinv37608 Davidia involucrata HOM05D007942 ORTHO05D010045 2.5e-10 69.3 73 42.5
HanXRQChr13g0415991 Helianthus annuus HOM05D007942 ORTHO05D010045 2.5e-10 69.3 81 42.0
Manes.02G018400 Manihot esculenta HOM05D007942 ORTHO05D010045 2.5e-10 69.3 76 46.1
A01p14720 Brassica napus HOM05D007942 ORTHO05D010045 3.2e-10 68.9 81 43.2
BraA01t01411Z Brassica rapa HOM05D007942 ORTHO05D010045 3.2e-10 68.9 81 43.2
CARHR230820 Cardamine hirsuta HOM05D007942 ORTHO05D010045 3.2e-10 68.9 81 44.4
Aa31LG6G6680 Aethionema arabicum HOM05D007942 ORTHO05D010045 4.2e-10 68.6 79 45.6
ClCG01G002420 Citrullus lanatus HOM05D007942 ORTHO05D010045 4.2e-10 68.6 83 39.8
ECA240G3258 Erigeron canadensis HOM05D007942 ORTHO05D010045 4.2e-10 68.6 83 41.0
C01p18220 Brassica napus HOM05D007942 ORTHO05D010045 5.5e-10 68.2 81 42.0
BolC1t01748H Brassica oleracea HOM05D007942 ORTHO05D010045 5.5e-10 68.2 81 42.0
Gorai.004G139100 Gossypium raimondii HOM05D007942 ORTHO05D010045 5.5e-10 68.2 85 43.5
Carub.0007s1768 Capsella rubella HOM05D007942 ORTHO05D010045 7.2e-10 67.8 80 45.0
Gohir.A08G115301 Gossypium hirsutum HOM05D007942 ORTHO05D010045 7.2e-10 67.8 78 42.3
EL10Ac5g12820 Beta vulgaris HOM05D007942 ORTHO05D010045 9.3e-10 67.4 82 46.3
DCAR_004614 Daucus carota HOM05D007942 ORTHO05D010045 9.3e-10 67.4 80 43.8
AT4G23493 Arabidopsis thaliana HOM05D007942 ORTHO05D010045 1.2e-09 67.0 81 42.0
Lsat_1_v5_gn_6_85240 Lactuca sativa HOM05D007942 ORTHO05D010045 1.6e-09 66.6 113 35.4
Psat2g183000 Pisum sativum HOM05D007942 ORTHO05D010045 1.6e-09 66.6 84 40.5
Potri.003G131550 Populus trichocarpa HOM05D007942 ORTHO05D010045 2.1e-09 66.2 85 38.8
Cpa.g.sc180.26 Carica papaya HOM05D007942 ORTHO05D010045 2.7e-09 65.9 76 42.1
MELO3C005703.2 Cucumis melo HOM05D007942 ORTHO05D010045 4.6e-09 65.1 83 38.6
TWI81G0525 Tripterygium wilfordii HOM05D007942 ORTHO05D010045 6.1e-09 64.7 77 46.8
TPR.G6630 Trifolium pratense HOM05D007942 ORTHO05D010045 1.0e-08 63.9 86 40.7
BcaC01g00815 Brassica carinata HOM05D007942 ORTHO05D010045 1.8e-08 63.2 78 43.6
Haze_08827 Corylus avellana HOM05D007942 ORTHO05D010045 2.3e-08 62.8 76 46.1
Glyma.01G221800 Glycine max HOM05D007942 ORTHO05D010045 2.3e-08 62.8 86 38.4
BcaB03g11761 Brassica carinata HOM05D007942 ORTHO05D010045 3.0e-08 62.4 69 43.5
BcaB03g11762 Brassica carinata HOM05D007942 ORTHO05D010045 3.0e-08 62.4 69 43.5
RcHm_v2.0_Chr7g0196851 Rosa chinensis HOM05D007942 ORTHO05D010045 3.0e-08 62.4 81 42.0
FAN18G2800 Fragaria x ananassa HOM05D007942 ORTHO05D010045 3.9e-08 62.0 81 42.0
Eucgr.E00650 Eucalyptus grandis HOM05D007942 ORTHO05D010045 5.1e-08 61.6 73 43.8
THA.LOC104814669 Tarenaya hassleriana HOM05D007942 ORTHO05D010045 5.1e-08 61.6 73 43.8
Medtr5g010040 Medicago truncatula HOM05D007942 ORTHO05D010045 6.7e-08 61.2 73 41.1
Atru.chr9.2136 Acer truncatum HOM05D007942 ORTHO05D010045 8.7e-08 60.8 86 40.7
Lalb_Chr05g0211711 Lupinus albus HOM05D007942 ORTHO05D010045 1.1e-07 60.5 57 47.4
Ah.07g196590 Amaranthus hybridus HOM05D007942 ORTHO05D010045 1.5e-07 60.1 85 34.1
Duzib205G1349 Durio zibethinus HOM05D007942 ORTHO05D010045 1.9e-07 59.7 64 45.3
FvH4_5g03010 Fragaria vesca HOM05D007942 ORTHO05D010045 3.3e-07 58.9 80 41.2
A08p16150 Brassica napus HOM05D007942 ORTHO05D010045 4.3e-07 58.5 79 39.2
C03p84680 Brassica napus HOM05D007942 ORTHO05D010045 4.3e-07 58.5 79 39.2
BolC3t20755H Brassica oleracea HOM05D007942 ORTHO05D010045 4.3e-07 58.5 79 39.2
CsaV3_5G002530 Cucumis sativus L. HOM05D007942 ORTHO05D010045 9.7e-07 57.4 73 39.7
FAN08G2317 Fragaria x ananassa HOM05D007942 ORTHO05D010045 2.2e-06 56.2 77 41.6
Lsat_1_v5_gn_6_85200 Lactuca sativa HOM05D007942 ORTHO05D010045 2.2e-06 56.2 57 47.4
vmacro13966 Vaccinium macrocarpon HOM05D007942 ORTHO05D010045 2.2e-06 56.2 79 34.2


User provided reference genes

Program Settings