Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 0.0e+00 1253.4 637 100.0
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 3.2e-172 609.4 652 55.4
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 1.4e-167 594.0 647 54.3
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 6.3e-136 488.8 587 50.1
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 8.3e-104 382.1 681 40.5
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 5.2e-90 336.3 605 41.0
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 1.0e-85 322.0 688 39.1
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 1.1e-82 312.0 695 36.1
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.1e-79 302.0 598 38.0
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 1.7e-77 294.7 678 35.1
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 3.3e-76 290.4 615 36.9
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 5.8e-73 279.6 681 33.9
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 7.9e-70 269.2 596 36.2
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 7.9e-70 269.2 676 33.4
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 5.1e-69 266.5 683 34.7
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 6.7e-69 266.2 683 33.4
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 6.7e-69 266.2 664 32.5
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 6.7e-69 266.2 646 33.9
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.5e-68 265.0 676 33.4
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 3.7e-67 260.4 506 38.5
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.4e-66 258.5 649 33.9
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 2.6e-65 254.2 642 35.2
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 3.4e-65 253.8 685 33.1
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 3.4e-65 253.8 642 35.5
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.3e-64 251.9 653 33.5
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.1e-63 248.8 610 33.1
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 2.5e-63 247.7 531 36.7
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 3.2e-63 247.3 495 38.8
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 4.2e-63 246.9 654 33.6
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 1.6e-62 245.0 582 34.2
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 2.1e-62 244.6 670 34.2
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 6.0e-62 243.0 611 34.9
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 6.7e-61 239.6 609 31.5
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 1.1e-60 238.8 659 31.1
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 4.3e-60 236.9 547 34.6
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 5.7e-60 236.5 587 33.7
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 9.6e-60 235.7 440 39.8
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 1.3e-59 235.3 518 34.6
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 1.6e-59 235.0 692 32.1
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 2.8e-59 234.2 560 33.9
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 4.8e-59 233.4 626 33.4
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 6.3e-59 233.0 523 34.2
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 1.2e-57 228.8 606 34.8
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 4.5e-57 226.9 567 34.2
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 1.0e-56 225.7 582 32.8
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 1.0e-56 225.7 462 35.3
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 2.2e-56 224.6 682 32.1
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.9e-56 224.2 589 34.1
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 1.1e-55 222.2 565 33.8
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 2.5e-55 221.1 580 34.7
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 5.5e-55 219.9 648 33.2
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 9.3e-55 219.2 615 31.4
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 1.6e-54 218.4 572 32.2
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 2.1e-54 218.0 512 36.9
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 3.5e-54 217.2 472 35.2
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 7.9e-54 216.1 494 36.2
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 7.9e-54 216.1 511 35.4
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 7.9e-54 216.1 555 32.1
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 1.0e-53 215.7 539 33.8
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 1.3e-53 215.3 558 34.4
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.3e-53 215.3 521 33.2
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.3e-53 215.3 521 33.2
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 1.8e-53 214.9 591 32.0
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 1.8e-53 214.9 688 31.0
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 1.8e-53 214.9 578 31.1
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 2.3e-53 214.5 687 32.6
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 3.0e-53 214.2 556 35.1
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 3.0e-53 214.2 519 32.8
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 3.9e-53 213.8 620 33.2
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 8.7e-53 212.6 505 35.0
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 8.7e-53 212.6 544 33.3
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.5e-52 211.8 505 35.2
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 1.5e-52 211.8 575 31.8
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 1.9e-52 211.5 522 34.5
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 3.3e-52 210.7 650 29.5
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 4.3e-52 210.3 603 31.7
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 5.7e-52 209.9 650 30.8
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 9.7e-52 209.1 569 31.6
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.3e-51 208.8 606 31.0
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 6.3e-51 206.5 624 31.6
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 8.2e-51 206.1 671 30.6
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 5.3e-50 203.4 671 30.1
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 7.7e-49 199.5 527 33.4
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 5.0e-48 196.8 641 29.8
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.5e-48 196.4 529 33.5
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.4e-47 195.3 355 37.7
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.1e-46 191.4 529 33.1
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 4.6e-46 190.3 509 32.4
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.1e-46 189.9 525 33.3
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 2.3e-45 188.0 551 33.6
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 6.7e-45 186.4 573 31.4
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 1.5e-41 175.3 578 31.8
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 2.0e-41 174.9 443 33.9
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 7.7e-41 172.9 405 35.6
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 1.0e-40 172.6 660 30.5
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 1.7e-40 171.8 574 30.3
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 6.5e-40 169.9 436 32.1
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 1.1e-39 169.1 573 30.9
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 1.1e-39 169.1 572 30.4
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 1.9e-39 168.3 557 31.1
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 5.5e-39 166.8 577 30.2
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 7.2e-39 166.4 327 36.4
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 1.2e-38 165.6 577 30.2
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 1.6e-38 165.2 572 30.2
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 2.1e-38 164.9 458 34.1
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 3.6e-38 164.1 520 31.5
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 7.9e-38 162.9 458 32.5
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 5.1e-37 160.2 455 33.0
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 8.8e-37 159.5 433 33.0
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 7.7e-33 146.4 368 32.6
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 1.5e-31 142.1 307 32.6
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 1.5e-31 142.1 312 32.7
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 3.5e-25 120.9 245 35.5
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 4.4e-20 104.0 272 32.4
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 5.7e-20 103.6 285 33.0
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.7e-19 102.1 282 26.2
MSTRG.11952 Avicennia marina HOM05D006267 ORTHO05D007490 4.5e-17 94.0 165 43.0
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 4.9e-11 73.9 215 33.0
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 8.6e-08 63.2 255 25.1
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.9e-07 62.0 105 35.2
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 6.1e-06 57.0 74 44.6


User provided reference genes

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