Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 6.4e-125 450.7 215 100.0
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 1.7e-37 160.2 163 54.6
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 3.3e-36 156.0 173 52.0
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 1.5e-33 147.1 153 54.2
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 2.4e-31 139.8 77 77.9
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 2.4e-31 139.8 117 62.4
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 5.4e-31 138.7 87 73.6
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 5.4e-31 138.7 95 68.4
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 5.4e-31 138.7 98 65.3
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 7.1e-31 138.3 77 80.5
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 9.2e-31 137.9 74 81.1
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 1.6e-30 137.1 126 58.7
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 1.6e-30 137.1 77 76.6
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 2.7e-30 136.3 77 79.2
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 2.7e-30 136.3 125 60.8
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 3.5e-30 136.0 74 78.4
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 3.5e-30 136.0 134 56.7
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 4.6e-30 135.6 75 80.0
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 6.0e-30 135.2 123 56.1
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 7.8e-30 134.8 76 78.9
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 7.8e-30 134.8 76 78.9
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 1.0e-29 134.4 74 79.7
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.0e-29 134.4 67 85.1
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 1.0e-29 134.4 76 78.9
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 1.0e-29 134.4 78 73.1
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 1.3e-29 134.0 74 78.4
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 1.3e-29 134.0 74 77.0
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 1.3e-29 134.0 67 83.6
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 1.3e-29 134.0 135 54.8
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 1.3e-29 134.0 140 51.4
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 1.3e-29 134.0 76 77.6
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 1.3e-29 134.0 74 77.0
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 1.7e-29 133.7 68 80.9
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 1.7e-29 133.7 75 77.3
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 2.3e-29 133.3 64 87.5
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 2.3e-29 133.3 77 79.2
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 2.3e-29 133.3 135 53.3
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 2.3e-29 133.3 67 85.1
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 3.0e-29 132.9 76 80.3
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 3.0e-29 132.9 76 78.9
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 5.1e-29 132.1 129 56.6
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 5.1e-29 132.1 64 85.9
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 5.1e-29 132.1 129 58.1
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 5.1e-29 132.1 113 61.9
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 5.1e-29 132.1 68 80.9
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 6.6e-29 131.7 71 80.3
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 6.6e-29 131.7 71 77.5
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 6.6e-29 131.7 76 78.9
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 6.6e-29 131.7 77 72.7
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 6.6e-29 131.7 78 73.1
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 8.6e-29 131.3 76 77.6
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 8.6e-29 131.3 140 52.1
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 1.1e-28 131.0 67 82.1
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 1.1e-28 131.0 65 83.1
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 1.1e-28 131.0 74 75.7
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 1.1e-28 131.0 74 75.7
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 1.5e-28 130.6 73 76.7
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 1.5e-28 130.6 65 83.1
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 1.9e-28 130.2 79 72.2
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 2.5e-28 129.8 65 83.1
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 3.3e-28 129.4 73 75.3
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 3.3e-28 129.4 66 81.8
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 3.3e-28 129.4 70 80.0
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 4.3e-28 129.0 148 48.0
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 5.6e-28 128.6 121 56.2
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 5.6e-28 128.6 104 57.7
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 7.3e-28 128.3 117 58.1
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 7.3e-28 128.3 146 51.4
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 1.6e-27 127.1 72 76.4
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 1.6e-27 127.1 78 73.1
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 2.1e-27 126.7 145 51.7
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 4.7e-27 125.6 112 55.4
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 4.7e-27 125.6 65 76.9
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 4.7e-27 125.6 65 76.9
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 4.7e-27 125.6 70 75.7
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 6.2e-27 125.2 71 77.5
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 8.1e-27 124.8 74 71.6
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 8.1e-27 124.8 65 76.9
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 8.1e-27 124.8 80 67.5
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 8.1e-27 124.8 80 67.5
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 8.1e-27 124.8 80 67.5
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 8.1e-27 124.8 72 75.0
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 1.4e-26 124.0 65 78.5
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 2.4e-26 123.2 73 75.3
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 2.4e-26 123.2 80 66.2
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 2.0e-25 120.2 65 75.4
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 3.4e-25 119.4 65 75.4
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 3.4e-25 119.4 65 75.4
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 3.4e-25 119.4 65 75.4
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 3.4e-25 119.4 158 44.9
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 4.4e-25 119.0 90 60.0
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 4.4e-25 119.0 90 60.0
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 4.4e-25 119.0 93 59.1
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 5.8e-25 118.6 65 75.4
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 5.8e-25 118.6 65 75.4
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 5.8e-25 118.6 65 75.4
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 1.3e-24 117.5 108 55.6
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 4.9e-24 115.5 85 60.0
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 8.4e-24 114.8 65 73.8
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 2.4e-23 113.2 143 45.5
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 9.3e-23 111.3 65 69.2
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 6.0e-22 108.6 74 62.2
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 1.7e-21 107.1 54 81.5
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 4.3e-20 102.4 67 67.2
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 3.5e-14 82.8 73 47.9
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 5.1e-13 79.0 89 42.7
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 4.9e-08 62.4 49 51.0
SGA_v2.0_scaffold12G06030 Striga asiatica HOM05D000010 ORTHO05D009239 2.7e-06 56.6 39 69.2
SGA_v2.0_scaffold42G16094 Striga asiatica HOM05D000010 ORTHO05D026196 3.5e-06 56.2 39 69.2


User provided reference genes

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