Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31397 Striga asiatica HOM05D002255 ORTHO05D002288 5.7e-71 270.8 134 100.0
Actinidia22177 Actinidia chinensis HOM05D002255 ORTHO05D002288 5.4e-13 78.2 62 66.1
SalBow8G1331 Salvia bowleyana HOM05D002255 ORTHO05D002288 5.4e-13 78.2 66 60.6
CSS0015495 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 2.7e-12 75.9 62 62.9
Rhsim02G0246900 Rhododendron simsii HOM05D002255 ORTHO05D002288 2.7e-12 75.9 94 50.0
Lsat_1_v5_gn_3_11301 Lactuca sativa HOM05D002255 ORTHO05D002288 4.6e-12 75.1 92 51.1
HanXRQChr17g0534981 Helianthus annuus HOM05D002255 ORTHO05D002288 1.7e-11 73.2 61 65.6
ECA246G0612 Erigeron canadensis HOM05D002255 ORTHO05D002288 3.9e-11 72.0 94 50.0
QL02p029860 Quercus lobata HOM05D002255 ORTHO05D002288 5.1e-11 71.6 86 45.3
CSS0048832 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 6.6e-11 71.2 49 71.4
QL02p029876 Quercus lobata HOM05D002255 ORTHO05D002288 8.6e-11 70.9 86 44.2
Ca_17465_v3 Cicer arietinum L. HOM05D002255 ORTHO05D002288 1.5e-10 70.1 63 57.1
Sed0012868 Sechium edule HOM05D002255 ORTHO05D002288 1.5e-10 70.1 77 49.4
CiPaw.12G081200 Carya illinoinensis HOM05D002255 ORTHO05D002288 1.9e-10 69.7 122 36.9
Nn1g00261 Nelumbo nucifera HOM05D002255 ORTHO05D002288 1.9e-10 69.7 69 60.9
Manes.02G008000 Manihot esculenta HOM05D002255 ORTHO05D002288 3.3e-10 68.9 82 50.0
Medtr8g099655 Medicago truncatula HOM05D002255 ORTHO05D002288 3.3e-10 68.9 63 57.1
PGR042G2287 Punica granatum HOM05D002255 ORTHO05D002288 3.3e-10 68.9 64 60.9
TPR.G3449 Trifolium pratense HOM05D002255 ORTHO05D002288 3.3e-10 68.9 63 55.6
COL.COLO4_10731 Corchorus olitorius HOM05D002255 ORTHO05D002288 5.6e-10 68.2 61 60.7
Phvul.002G300100 Phaseolus vulgaris HOM05D002255 ORTHO05D002288 5.6e-10 68.2 63 55.6
Duzib205G1099 Durio zibethinus HOM05D002255 ORTHO05D002288 7.3e-10 67.8 107 43.0
Nn3g18976 Nelumbo nucifera HOM05D002255 ORTHO05D002288 1.6e-09 66.6 70 51.4
Thecc.03G301000 Theobroma cacao HOM05D002255 ORTHO05D002288 1.6e-09 66.6 76 51.3
CiPaw.11G118700 Carya illinoinensis HOM05D002255 ORTHO05D002288 2.1e-09 66.2 67 52.2
Psat7g024880 Pisum sativum HOM05D002255 ORTHO05D002288 2.1e-09 66.2 64 57.8
DCAR_006522 Daucus carota HOM05D002255 ORTHO05D002288 2.8e-09 65.9 59 55.9
Lj2P163T54 Lonicera japonica HOM05D002255 ORTHO05D002288 2.8e-09 65.9 60 60.0
Cfa011979 Carpinus fangiana HOM05D002255 ORTHO05D002288 3.6e-09 65.5 67 50.7
Sabra01G0065200 Salix brachista HOM05D002255 ORTHO05D002288 3.6e-09 65.5 63 57.1
Migut.E01280 Erythranthe guttata HOM05D002255 ORTHO05D002288 4.7e-09 65.1 54 63.0
Potri.001G089000 Populus trichocarpa HOM05D002255 ORTHO05D002288 4.7e-09 65.1 63 58.7
Hma1.2p1_0359F.1_g135100 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 6.2e-09 64.7 51 64.7
Atru.chr9.1928 Acer truncatum HOM05D002255 ORTHO05D002288 8.1e-09 64.3 66 53.0
Gohir.D03G084400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 8.1e-09 64.3 81 45.7
Gorai.003G078200 Gossypium raimondii HOM05D002255 ORTHO05D002288 8.1e-09 64.3 81 45.7
Ciclev10023315m.g Citrus clementina HOM05D002255 ORTHO05D002288 1.1e-08 63.9 75 52.0
Gohir.A02G099300 Gossypium hirsutum HOM05D002255 ORTHO05D002288 1.1e-08 63.9 81 45.7
VMungo0251G1524 Vigna mungo HOM05D002255 ORTHO05D002288 1.8e-08 63.2 63 52.4
Lj4g0026828 Lotus japonicus HOM05D002255 ORTHO05D002288 2.4e-08 62.8 90 43.3
MBI06_g13416_MAGBIO Magnolia biondii HOM05D002255 ORTHO05D002288 2.4e-08 62.8 77 50.6
Glyma.08G024400 Glycine max HOM05D002255 ORTHO05D002288 3.1e-08 62.4 48 62.5
Solyc08g008360.2 Solanum lycopersicum HOM05D002255 ORTHO05D002288 3.1e-08 62.4 65 46.2
Sopen08g004240 Solanum pennellii HOM05D002255 ORTHO05D002288 3.1e-08 62.4 65 46.2
PGSC0003DMG400005843 Solanum tuberosum HOM05D002255 ORTHO05D002288 3.1e-08 62.4 65 46.2
Glyma.05G218300 Glycine max HOM05D002255 ORTHO05D002288 4.0e-08 62.0 48 62.5
Gohir.A09G189700 Gossypium hirsutum HOM05D002255 ORTHO05D002288 4.0e-08 62.0 71 47.9
Gohir.D09G184400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 4.0e-08 62.0 71 47.9
Aqoxy7G00071 Aquilegia oxysepala HOM05D002255 ORTHO05D002288 5.2e-08 61.6 61 54.1
CANSAT21G1974 Cannabis sativa HOM05D002255 ORTHO05D002288 5.2e-08 61.6 66 54.5
Gorai.006G206900 Gossypium raimondii HOM05D002255 ORTHO05D002288 5.2e-08 61.6 71 47.9
TWI60G0014 Tripterygium wilfordii HOM05D002255 ORTHO05D002288 5.2e-08 61.6 85 44.7
CsaV3_4G006750 Cucumis sativus L. HOM05D002255 ORTHO05D002288 6.8e-08 61.2 72 50.0
Lalb_Chr05g0224011 Lupinus albus HOM05D002255 ORTHO05D002288 6.8e-08 61.2 59 50.8
ClCG07G011470 Citrullus lanatus HOM05D002255 ORTHO05D002288 8.9e-08 60.8 78 47.4
Peaxi162Scf00102g01853 Petunia axillaris HOM05D002255 ORTHO05D002288 8.9e-08 60.8 105 41.0
Eucgr.E00885 Eucalyptus grandis HOM05D002255 ORTHO05D002288 1.2e-07 60.5 59 55.9
QL02p029867 Quercus lobata HOM05D002255 ORTHO05D002288 2.0e-07 59.7 44 68.2
MELO3C016274.2 Cucumis melo HOM05D002255 ORTHO05D002288 3.4e-07 58.9 88 43.2
Prupe.5G123000 Prunus persica HOM05D002255 ORTHO05D002288 4.4e-07 58.5 50 62.0
Cpa.g.sc634.4 Carica papaya HOM05D002255 ORTHO05D002288 2.9e-06 55.8 47 57.4
ATR0078G028 Amborella trichopoda HOM05D002255 ORTHO05D002288 6.4e-06 54.7 76 44.7
RcHm_v2.0_Chr7g0194121 Rosa chinensis HOM05D002255 ORTHO05D002288 8.4e-06 54.3 102 40.2


User provided reference genes

Program Settings