Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31373 Striga asiatica HOM05D001237 ORTHO05D009110 7.4e-115 417.2 203 100.0
Migut.E01337 Erythranthe guttata HOM05D001237 ORTHO05D009110 4.2e-102 374.8 203 89.2
Oeu038592.1 Olea europaea HOM05D001237 ORTHO05D009110 8.3e-98 360.5 203 85.2
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 3.1e-97 358.6 203 85.2
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 4.1e-97 358.2 203 81.8
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 5.4e-97 357.8 203 83.3
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 7.0e-97 357.5 215 80.5
Rhsim07G0137000 Rhododendron simsii HOM05D001237 ORTHO05D009110 7.0e-97 357.5 203 83.7
GSVIVG01022633001 Vitis vinifera HOM05D001237 ORTHO05D009110 7.0e-97 357.5 203 84.7
TAR629G2165 Trochodendron aralioides HOM05D001237 ORTHO05D009110 9.1e-97 357.1 203 82.8
Nitab4.5_0002735g0030 Nicotiana tabacum HOM05D001237 ORTHO05D009110 7.7e-96 354.0 203 82.8
Nitab4.5_0001033g0010 Nicotiana tabacum HOM05D001237 ORTHO05D009110 1.3e-95 353.2 203 82.3
CAN.G773.2 Capsicum annuum HOM05D001237 ORTHO05D009110 3.8e-95 351.7 203 81.8
CiPaw.12G070700 Carya illinoinensis HOM05D001237 ORTHO05D009110 3.8e-95 351.7 203 83.7
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 5.0e-95 351.3 203 83.7
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 6.6e-95 350.9 203 81.8
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.1e-94 350.1 203 81.8
Potri.003G100300 Populus trichocarpa HOM05D001237 ORTHO05D009110 1.1e-94 350.1 203 83.3
Solyc08g075990.3 Solanum lycopersicum HOM05D001237 ORTHO05D009110 1.9e-94 349.4 203 81.3
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 3.3e-94 348.6 203 81.8
Gohir.A08G151200 Gossypium hirsutum HOM05D001237 ORTHO05D009110 3.3e-94 348.6 203 82.8
Prupe.5G022700 Prunus persica HOM05D001237 ORTHO05D009110 5.5e-94 347.8 203 81.8
THA.LOC104812764 Tarenaya hassleriana HOM05D001237 ORTHO05D009110 5.5e-94 347.8 203 82.8
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 9.5e-94 347.1 203 81.3
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 9.5e-94 347.1 203 82.3
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 1.2e-93 346.7 203 82.3
CsaV3_3G001140 Cucumis sativus L. HOM05D001237 ORTHO05D009110 1.2e-93 346.7 203 81.3
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 1.2e-93 346.7 203 81.3
RcHm_v2.0_Chr7g0213081 Rosa chinensis HOM05D001237 ORTHO05D009110 1.6e-93 346.3 203 81.3
Actinidia18147 Actinidia chinensis HOM05D001237 ORTHO05D009110 2.1e-93 345.9 203 81.3
ECA233G0844 Erigeron canadensis HOM05D001237 ORTHO05D009110 3.6e-93 345.1 203 79.8
DCAR_024946 Daucus carota HOM05D001577 ORTHO05D009110 8.0e-93 344.0 203 81.8
Hma1.2p1_0979F.1_g243590 Hydrangea macrophylla HOM05D001237 ORTHO05D009110 1.8e-92 342.8 215 77.7
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 1.8e-92 342.8 203 80.8
Phvul.002G132200 Phaseolus vulgaris HOM05D001237 ORTHO05D009110 1.8e-92 342.8 204 82.4
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 2.3e-92 342.4 203 80.3
Ah.07g201260 Amaranthus hybridus HOM05D001237 ORTHO05D009110 3.0e-92 342.0 206 81.1
CANSAT25G2402 Cannabis sativa HOM05D001237 ORTHO05D009110 3.0e-92 342.0 203 81.3
ATR0829G072 Amborella trichopoda HOM05D001237 ORTHO05D009110 4.0e-92 341.7 203 81.3
Cpa.g.sc24.66 Carica papaya HOM05D001237 ORTHO05D009110 4.0e-92 341.7 203 80.3
PGR042G3955 Punica granatum HOM05D001237 ORTHO05D009110 4.0e-92 341.7 203 80.8
Ca_25144_v3 Cicer arietinum L. HOM05D001237 ORTHO05D000217 1.5e-91 339.7 204 80.9
TPR.G29137 Trifolium pratense HOM05D001237 ORTHO05D009110 2.0e-91 339.3 204 80.4
VMungo1215G0366 Vigna mungo HOM05D001237 ORTHO05D000217 2.0e-91 339.3 204 81.9
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 2.6e-91 339.0 204 80.4
Cc00_g24190 Coffea canephora HOM05D001237 ORTHO05D009110 3.4e-91 338.6 203 80.3
PSO782G3536 Papaver somniferum HOM05D001237 ORTHO05D009110 3.4e-91 338.6 201 79.1
Sc07g0008510 Simmondsia chinensis HOM05D001237 ORTHO05D009110 3.4e-91 338.6 201 81.6
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 7.5e-91 337.4 203 79.3
MELO3C013804.2 Cucumis melo HOM05D001237 ORTHO05D009110 1.3e-90 336.7 214 77.6
COL.COLO4_27340 Corchorus olitorius HOM05D001237 ORTHO05D009110 1.7e-90 336.3 202 79.2
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 2.2e-90 335.9 202 79.7
EL10Ac5g11946 Beta vulgaris HOM05D001237 ORTHO05D009110 2.9e-90 335.5 203 79.3
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 2.9e-90 335.5 203 79.3
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 4.9e-90 334.7 203 79.3
Peaxi162Scf00408g00416 Petunia axillaris HOM05D001237 ORTHO05D009110 6.3e-90 334.3 212 76.9
Glyma.01G147700 Glycine max HOM05D001237 ORTHO05D009110 8.3e-90 334.0 204 80.4
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 1.4e-89 333.2 206 79.1
Medtr5g027220 Medicago truncatula HOM05D001237 ORTHO05D009110 2.4e-89 332.4 201 79.6
Lj2g0015654 Lotus japonicus HOM05D001237 ORTHO05D009110 3.2e-89 332.0 204 78.9
Glyma.20G094800 Glycine max HOM05D001237 ORTHO05D009110 4.1e-89 331.6 204 80.9
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 9.2e-89 330.5 203 77.8
CSS0010822 Camellia sinensis var. sinensis HOM05D001237 ORTHO05D009110 1.2e-88 330.1 207 79.2
Eucgr.E01249 Eucalyptus grandis HOM05D001237 ORTHO05D009110 1.6e-88 329.7 200 79.0
Thhalv10004626m.g Eutrema salsugineum HOM05D001237 ORTHO05D009110 2.7e-88 328.9 203 78.3
Aa31LG9G15560 Aethionema arabicum HOM05D001237 ORTHO05D009110 3.5e-88 328.6 203 77.8
Lalb_Chr05g0215521 Lupinus albus HOM05D001237 ORTHO05D009110 3.5e-88 328.6 201 79.6
Cfa012569 Carpinus fangiana HOM05D001237 ORTHO05D009110 1.3e-87 326.6 203 77.8
Zm00001eb208900 Zea mays HOM05D001237 ORTHO05D009110 1.3e-87 326.6 204 77.5
BraA06t26806Z Brassica rapa HOM05D001237 ORTHO05D009110 1.7e-87 326.2 203 78.3
A06p38920 Brassica napus HOM05D001237 ORTHO05D009110 2.3e-87 325.9 203 78.3
C07p39410 Brassica napus HOM05D001237 ORTHO05D009110 8.6e-87 323.9 203 77.3
CARHR182950 Cardamine hirsuta HOM05D001237 ORTHO05D009110 8.6e-87 323.9 201 77.6
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 7.3e-86 320.9 203 76.8
Lsat_1_v5_gn_6_17621 Lactuca sativa HOM05D001237 ORTHO05D009110 1.6e-85 319.7 202 76.7
Dinv15842 Davidia involucrata HOM05D001237 ORTHO05D009110 8.9e-84 313.9 170 87.1
BolC7t44460H Brassica oleracea HOM05D001237 ORTHO05D009110 9.8e-83 310.5 193 76.7
CDE02G0540 Ceratophyllum demersum HOM05D001237 ORTHO05D009110 1.5e-78 296.6 180 78.9
unitig_747.g21357 Utricularia gibba HOM05D000467 ORTHO05D000379 4.7e-77 291.6 175 79.4
HanXRQChr08g0226791 Helianthus annuus HOM05D001237 ORTHO05D009110 1.2e-75 287.0 171 79.5
BcaC06g30758 Brassica carinata HOM05D001237 ORTHO05D009110 1.3e-74 283.5 203 71.4
Sabra03G0068500 Salix brachista HOM05D001237 ORTHO05D009110 9.2e-73 277.3 216 67.6
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 4.6e-72 275.0 201 62.7
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 2.3e-68 262.7 204 60.8
ClCG10G001120 Citrullus lanatus HOM05D001237 ORTHO05D009110 5.8e-67 258.1 203 66.5
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 3.7e-66 255.4 200 57.5
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 2.2e-58 229.6 193 56.0
SEGI_12758 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 5.4e-57 224.9 135 77.0
CBR_g18855 Chara braunii HOM05D001237 ORTHO05D009110 2.3e-55 219.5 166 60.2
RcHm_v2.0_Chr7g0213121 Rosa chinensis HOM05D001237 ORTHO05D009110 9.9e-51 204.1 250 49.2
Hund11115 Selenicereus undatus HOM05D001237 ORTHO05D009110 1.7e-50 203.4 124 79.0
arahy.Tifrunner.gnm1.ann1.3EKV6C Arachis hypogaea HOM05D001237 ORTHO05D009110 8.7e-47 191.0 145 69.0
arahy.Tifrunner.gnm1.ann1.YIEM7C Arachis hypogaea HOM05D001237 ORTHO05D009110 8.7e-47 191.0 145 69.0
Lju2073A0T61 Lonicera japonica HOM05D001237 ORTHO05D009110 8.4e-42 174.5 112 75.9
Glyma.09G212000 Glycine max HOM05D001237 ORTHO05D009110 6.7e-39 164.9 106 78.3
Sopen09g023280 Solanum pennellii HOM05D001237 ORTHO05D009110 7.4e-38 161.4 98 76.5
QL12p001026 Quercus lobata HOM05D001237 ORTHO05D009110 6.2e-37 158.3 90 83.3
PRCOL_00004822 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 3.8e-34 149.1 198 42.9
Cre04.g212500 Chlamydomonas reinhardtii HOM05D001237 ORTHO05D009110 1.9e-33 146.7 221 40.3
Gohir.D08G172350 Gossypium hirsutum HOM05D001237 ORTHO05D009110 1.5e-30 137.1 79 78.5
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 3.4e-27 125.9 224 33.9
PRCOL_00006184 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 1.2e-19 100.9 154 35.7
HPP92_025933 Vanilla planifolia HOM05D001237 ORTHO05D009110 4.5e-19 99.0 67 70.1
MCO12G167 Micromonas commoda HOM05D001237 ORTHO05D009110 6.5e-18 95.1 221 29.4


User provided reference genes

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