Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 8.8e-246 853.2 437 100.0
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 2.6e-173 612.5 430 75.3
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 2.2e-172 609.4 430 75.1
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 2.1e-170 602.8 428 72.9
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 4.6e-170 601.7 428 72.9
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 9.6e-168 594.0 434 72.4
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 2.8e-167 592.4 430 74.7
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 5.4e-163 578.2 430 70.2
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 9.3e-163 577.4 427 70.5
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 2.1e-162 576.2 417 71.5
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 3.9e-161 572.0 427 71.0
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 8.7e-161 570.9 421 70.8
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 1.1e-160 570.5 420 71.4
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 1.1e-160 570.5 420 71.0
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 7.3e-160 567.8 425 69.9
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 1.6e-159 566.6 419 71.1
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 6.2e-159 564.7 419 70.6
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.4e-158 563.5 393 74.0
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.8e-158 563.1 421 69.8
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.8e-158 563.1 426 70.0
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 3.4e-157 558.9 416 70.9
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 2.9e-156 555.8 417 70.0
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.9e-156 555.1 423 69.7
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.9e-155 553.1 421 69.6
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 7.9e-154 547.7 427 69.3
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.3e-153 547.0 393 72.3
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 1.5e-152 543.5 411 69.6
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 7.4e-152 541.2 398 69.8
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.6e-151 540.0 467 63.8
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 3.7e-151 538.9 393 72.3
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 8.1e-151 537.7 387 71.8
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 8.1e-151 537.7 448 65.6
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 1.8e-150 536.6 388 71.6
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 4.0e-150 535.4 396 71.2
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 6.9e-150 534.6 429 65.3
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.5e-149 533.5 402 68.9
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 1.5e-149 533.5 393 70.5
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 1.0e-148 530.8 363 74.1
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 1.1e-147 527.3 403 69.0
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 3.2e-147 525.8 403 67.7
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 5.5e-147 525.0 391 70.6
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.1e-146 523.1 429 65.3
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.5e-146 522.3 403 68.2
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 3.5e-146 522.3 391 70.1
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 4.6e-146 521.9 409 66.7
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.8e-145 520.0 389 71.0
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.3e-145 519.6 403 67.7
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 2.3e-145 519.6 387 69.8
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 8.7e-145 517.7 389 67.9
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.5e-144 516.9 395 68.1
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 1.9e-144 516.5 408 67.2
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 3.3e-144 515.8 392 67.9
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 3.3e-144 515.8 420 65.7
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 1.3e-143 513.8 379 68.9
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 2.8e-143 512.7 409 66.3
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 4.8e-143 511.9 402 68.7
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.1e-142 510.8 384 68.2
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.4e-142 510.4 394 68.5
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 1.8e-142 510.0 400 66.8
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.4e-142 509.6 402 67.4
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 9.0e-142 507.7 361 72.9
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.2e-141 507.3 399 67.4
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.2e-141 507.3 399 66.2
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 2.0e-141 506.5 376 69.7
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 5.8e-141 505.0 406 66.3
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 5.8e-141 505.0 363 70.2
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.7e-140 503.4 388 67.8
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 1.6e-138 496.9 409 65.8
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 2.7e-138 496.1 439 60.1
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 8.7e-137 491.1 403 65.5
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 3.7e-135 485.7 401 63.8
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 5.3e-134 481.9 421 62.9
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 2.0e-133 479.9 386 64.5
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 2.2e-132 476.5 367 66.8
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 5.0e-132 475.3 405 63.7
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 6.5e-132 474.9 386 64.5
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 9.7e-128 461.1 329 72.3
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 1.7e-127 460.3 474 54.2
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 6.9e-126 454.9 329 71.4
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 2.6e-125 453.0 354 67.8
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 4.5e-125 452.2 354 68.4
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 7.9e-122 441.4 405 59.3
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 9.7e-120 434.5 387 60.5
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 2.2e-119 433.3 398 58.3
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 9.1e-118 427.9 362 63.8
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 3.5e-117 426.0 395 57.2
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 3.8e-116 422.5 386 57.3
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 8.5e-116 421.4 394 58.4
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 8.2e-111 404.8 387 58.1
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 1.4e-110 404.1 402 57.0
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.4e-110 404.1 314 66.9
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 7.0e-110 401.7 394 57.9
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 4.5e-109 399.1 409 56.0
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 5.9e-109 398.7 415 55.4
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 3.8e-108 396.0 410 55.9
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 3.8e-108 396.0 410 55.9
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 3.8e-108 396.0 435 52.6
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 6.5e-108 395.2 420 54.3
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 2.7e-98 363.2 411 53.0
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 2.7e-98 363.2 411 53.0
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 1.8e-97 360.5 298 66.4
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 1.8e-97 360.5 365 57.3
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 5.2e-97 359.0 396 53.3
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 3.4e-96 356.3 391 53.5
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 3.4e-96 356.3 391 53.5
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 2.2e-95 353.6 420 50.5
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.4e-86 323.6 231 71.0
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.4e-81 307.8 239 68.2
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 2.2e-63 247.3 366 40.2
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 7.1e-54 215.7 147 75.5
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 5.1e-52 209.5 389 36.2
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 3.6e-50 203.4 139 72.7
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 1.8e-49 201.1 415 34.2
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 3.3e-43 180.3 235 48.9
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 9.6e-43 178.7 152 59.9
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 6.2e-42 176.0 411 35.3
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 1.7e-39 167.9 125 68.8
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 2.2e-39 167.5 124 68.5
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 1.2e-37 161.8 409 33.0
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.2e-32 145.2 104 68.3
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 6.5e-31 139.4 122 56.6
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 2.3e-28 131.0 192 43.2
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 2.0e-24 117.9 309 31.4
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 1.4e-22 111.7 126 50.8
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 1.5e-19 101.7 78 64.1
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 1.8e-17 94.7 68 72.1
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 3.1e-09 67.4 48 68.8
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 7.7e-08 62.8 384 24.2
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 8.5e-07 59.3 246 23.6
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 8.5e-07 59.3 412 22.6
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 1.9e-06 58.2 412 22.3
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 2.5e-06 57.8 273 23.4
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 9.4e-06 55.8 419 24.3


User provided reference genes

Program Settings