Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31350 Striga asiatica HOM05D007132 ORTHO05D009120 5.2e-234 813.9 388 100.0
SalBow8G0736 Salvia bowleyana HOM05D007132 ORTHO05D009120 1.5e-151 540.0 371 70.4
MSTRG.1761 Avicennia marina HOM05D007132 ORTHO05D009120 2.8e-147 525.8 388 68.0
Oeu046789.1 Olea europaea HOM05D007132 ORTHO05D009120 4.9e-139 498.4 390 63.3
Nitab4.5_0004157g0010 Nicotiana tabacum HOM05D007132 ORTHO05D009120 2.0e-129 466.5 377 60.7
Sopen08g024160 Solanum pennellii HOM05D007132 ORTHO05D009120 2.0e-129 466.5 378 60.6
Cc08_g05480 Coffea canephora HOM05D007132 ORTHO05D009120 2.7e-129 466.1 368 61.7
PGSC0003DMG400001970 Solanum tuberosum HOM05D007132 ORTHO05D009120 7.8e-129 464.5 378 60.3
Solyc08g075510.4 Solanum lycopersicum HOM05D007132 ORTHO05D009120 3.0e-128 462.6 378 59.8
Actinidia32785 Actinidia chinensis HOM05D007132 ORTHO05D009120 1.9e-127 459.9 375 59.7
DCAR_028364 Daucus carota HOM05D007132 ORTHO05D009120 4.3e-127 458.8 389 57.1
Thecc.09G252800 Theobroma cacao HOM05D007132 ORTHO05D009120 4.3e-127 458.8 370 59.7
Lsat_1_v5_gn_6_15181 Lactuca sativa HOM05D007132 ORTHO05D009120 2.1e-126 456.4 367 59.4
TPR.G5247 Trifolium pratense HOM05D007132 ORTHO05D009120 4.7e-126 455.3 391 55.8
CAN.G1026.1 Capsicum annuum HOM05D007132 ORTHO05D009120 1.4e-125 453.8 389 57.6
Psat2g145880 Pisum sativum HOM05D007132 ORTHO05D009120 4.0e-125 452.2 387 56.3
vmacro00083 Vaccinium macrocarpon HOM05D007132 ORTHO05D009120 6.8e-125 451.4 385 58.4
Manes.S095221 Manihot esculenta HOM05D007132 ORTHO05D009120 2.0e-124 449.9 363 60.3
Lj8A344T21 Lonicera japonica HOM05D007132 ORTHO05D009120 2.6e-124 449.5 451 52.5
Lj8C1T2 Lonicera japonica HOM05D007132 ORTHO05D009120 2.6e-124 449.5 451 52.1
Potri.009G025400 Populus trichocarpa HOM05D007132 ORTHO05D009120 4.4e-124 448.7 389 57.8
Ciclev10031829m.g Citrus clementina HOM05D007132 ORTHO05D009120 5.8e-124 448.4 367 59.4
Eucgr.E01138 Eucalyptus grandis HOM05D007132 ORTHO05D009120 5.8e-124 448.4 368 59.0
Cfa012869 Carpinus fangiana HOM05D007132 ORTHO05D009120 9.8e-124 447.6 382 58.1
PGR042G0795 Punica granatum HOM05D007132 ORTHO05D009120 9.8e-124 447.6 377 57.8
CiPaw.11G075400 Carya illinoinensis HOM05D007132 ORTHO05D009120 1.3e-123 447.2 377 58.4
VMungo1215G2638 Vigna mungo HOM05D007132 ORTHO05D009120 1.7e-123 446.8 360 58.9
Gohir.D09G105701 Gossypium hirsutum HOM05D007132 ORTHO05D009120 4.9e-123 445.3 358 60.3
Gorai.006G123100 Gossypium raimondii HOM05D007132 ORTHO05D009120 4.9e-123 445.3 358 60.3
Sabra09G0016800 Salix brachista HOM05D007132 ORTHO05D009120 4.9e-123 445.3 360 60.3
unitig_46.g18229 Utricularia gibba HOM05D007132 ORTHO05D009120 6.4e-123 444.9 370 60.0
Duzib168G0014 Durio zibethinus HOM05D007132 ORTHO05D009120 8.3e-123 444.5 360 59.2
COL.COLO4_33243 Corchorus olitorius HOM05D007132 ORTHO05D009120 1.1e-122 444.1 383 58.0
Glyma.11G089600 Glycine max HOM05D007132 ORTHO05D009120 1.1e-122 444.1 357 59.4
EL10Ac2g04081 Beta vulgaris HOM05D007132 ORTHO05D009120 1.9e-122 443.4 361 59.8
RcHm_v2.0_Chr5g0027441 Rosa chinensis HOM05D007132 ORTHO05D009120 1.9e-122 443.4 370 57.6
Lj2g0003748 Lotus japonicus HOM05D007132 ORTHO05D009120 4.1e-122 442.2 361 59.3
MD05G1209900 Malus domestica HOM05D007132 ORTHO05D009120 4.1e-122 442.2 360 58.1
Potri.001G233200 Populus trichocarpa HOM05D007132 ORTHO05D009120 4.1e-122 442.2 382 57.9
Gohir.A09G109100 Gossypium hirsutum HOM05D007132 ORTHO05D009120 7.0e-122 441.4 358 60.1
HanXRQChr12g0382251 Helianthus annuus HOM05D007132 ORTHO05D009120 1.6e-121 440.3 363 58.7
Nitab4.5_0000030g0380 Nicotiana tabacum HOM05D007132 ORTHO05D009120 1.6e-121 440.3 377 57.8
Aa31LG9G15710 Aethionema arabicum HOM05D007132 ORTHO05D009120 3.5e-121 439.1 368 57.3
BcaB01g01051 Brassica carinata HOM05D007132 ORTHO05D009120 7.8e-121 438.0 365 57.5
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 1.0e-120 437.6 384 57.0
Atru.chr8.2638 Acer truncatum HOM05D007132 ORTHO05D009120 1.3e-120 437.2 360 57.2
Medtr5g025190 Medicago truncatula HOM05D007132 ORTHO05D009120 1.3e-120 437.2 378 55.3
CSS0020867 Camellia sinensis var. sinensis HOM05D007132 ORTHO05D009120 6.6e-120 434.9 392 56.9
TWI75G0244 Tripterygium wilfordii HOM05D007132 ORTHO05D009120 6.6e-120 434.9 361 57.9
CANSAT11G0857 Cannabis sativa HOM05D007132 ORTHO05D009120 8.6e-120 434.5 363 56.7
AUR62009339 Chenopodium quinoa HOM05D007132 ORTHO05D009120 1.5e-119 433.7 358 58.7
FvH4_3g16420 Fragaria vesca HOM05D007132 ORTHO05D009120 1.9e-119 433.3 370 56.2
Aqoxy3G02733 Aquilegia oxysepala HOM05D007132 ORTHO05D009120 3.3e-119 432.6 367 56.9
CARHR154210 Cardamine hirsuta HOM05D007132 ORTHO05D009120 3.3e-119 432.6 363 56.7
arahy.Tifrunner.gnm1.ann1.63YFX7 Arachis hypogaea HOM05D007132 ORTHO05D009120 4.3e-119 432.2 393 55.0
arahy.Tifrunner.gnm1.ann1.WE0KUF Arachis hypogaea HOM05D007132 ORTHO05D009120 4.3e-119 432.2 393 55.0
Sp2g03890 Schrenkiella parvula HOM05D007132 ORTHO05D009120 4.3e-119 432.2 360 58.3
BraA06t25207Z Brassica rapa HOM05D007132 ORTHO05D009120 1.2e-118 430.6 361 56.8
Thhalv10002595m.g Eutrema salsugineum HOM05D007132 ORTHO05D009120 6.2e-118 428.3 361 57.9
Nn1g09371 Nelumbo nucifera HOM05D007132 ORTHO05D009120 8.1e-118 427.9 372 57.3
AL5G24560 Arabidopsis lyrata HOM05D007132 ORTHO05D009120 2.3e-117 426.4 361 56.8
A06p21200 Brassica napus HOM05D007132 ORTHO05D009120 4.0e-117 425.6 364 56.0
BolC3t19289H Brassica oleracea HOM05D007132 ORTHO05D009120 4.0e-117 425.6 364 56.0
C03p70370 Brassica napus HOM05D007132 ORTHO05D009120 8.9e-117 424.5 360 56.4
Carub.0005s1173 Capsella rubella HOM05D007132 ORTHO05D009120 1.3e-115 420.6 380 53.9
CDE02G3577 Ceratophyllum demersum HOM05D007132 ORTHO05D009120 1.3e-115 420.6 361 56.2
FAN11G4000 Fragaria x ananassa HOM05D007132 ORTHO05D009120 1.3e-115 420.6 375 55.2
AT3G45880 Arabidopsis thaliana HOM05D007132 ORTHO05D009120 8.3e-115 417.9 361 56.0
FAN25G2365 Fragaria x ananassa HOM05D007132 ORTHO05D009120 1.4e-114 417.2 375 54.9
Peaxi162Scf00053g00715 Petunia axillaris HOM05D007132 ORTHO05D009120 3.2e-114 416.0 373 55.5
PSO541G5430 Papaver somniferum HOM05D007132 ORTHO05D009120 7.1e-114 414.8 378 54.2
MBI04_g06282_MAGBIO Magnolia biondii HOM05D007132 ORTHO05D009120 2.1e-113 413.3 358 57.3
QL12p004376 Quercus lobata HOM05D007132 ORTHO05D009120 2.3e-112 409.8 425 50.1
ATR0568G089 Amborella trichopoda HOM05D007132 ORTHO05D009120 3.3e-111 406.0 365 54.5
Sc01g0005800 Simmondsia chinensis HOM05D007132 ORTHO05D009120 3.6e-110 402.5 346 56.1
AUR62023023 Chenopodium quinoa HOM05D007132 ORTHO05D009120 1.7e-107 393.7 359 54.0
AUR62043353 Chenopodium quinoa HOM05D007132 ORTHO05D009120 1.7e-107 393.7 359 54.0
BcaC01g01945 Brassica carinata HOM05D007132 ORTHO05D009120 2.1e-105 386.7 345 53.9
THA.LOC104798521 Tarenaya hassleriana HOM05D007132 ORTHO05D009120 6.0e-105 385.2 381 49.9
Os09g0483600 Oryza sativa ssp. japonica HOM05D007132 ORTHO05D009120 1.3e-104 384.0 374 53.2
Zm00001eb316510 Zea mays HOM05D007132 ORTHO05D009120 2.3e-104 383.3 372 54.6
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 7.3e-103 378.3 334 55.4
SEGI_38459 Sequoiadendron giganteum HOM05D007132 ORTHO05D009120 1.5e-100 370.5 362 51.4
Phvul.002G120400 Phaseolus vulgaris HOM05D007132 ORTHO05D009120 8.4e-99 364.8 317 55.2
Prupe.4G147600 Prunus persica HOM05D007132 ORTHO05D009120 4.2e-98 362.5 318 54.7
Hund11034 Selenicereus undatus HOM05D007132 ORTHO05D009120 2.7e-97 359.8 319 54.2
Pp3c2_13200 Physcomitrium patens HOM05D007132 ORTHO05D009120 2.3e-96 356.7 383 48.6
Haze_08441 Corylus avellana HOM05D007132 ORTHO05D009120 3.0e-96 356.3 323 54.8
Lalb_Chr05g0215041 Lupinus albus HOM05D007132 ORTHO05D009120 1.1e-95 354.4 323 53.3
Nitab4.5_0000898g0130 Nicotiana tabacum HOM05D007132 ORTHO05D009120 1.4e-85 320.9 312 52.6
Ah.10g035250 Amaranthus hybridus HOM05D001758 ORTHO05D005969 2.6e-84 316.6 320 50.6
SMO367G0267 Selaginella moellendorffii HOM05D007132 ORTHO05D009120 5.8e-84 315.5 383 43.9
PSO675G1526 Papaver somniferum HOM05D007132 ORTHO05D009120 2.3e-72 276.9 285 48.8
AagrBONN_evm.TU.Sc2ySwM_344.2529 Anthoceros agrestis HOM05D007132 ORTHO05D009120 5.9e-60 235.7 281 44.8
Cc02_g31510 Coffea canephora HOM05D007132 ORTHO05D009120 1.9e-58 230.7 182 59.9
MD10G1196200 Malus domestica HOM05D007132 ORTHO05D009120 9.1e-53 211.8 192 53.1
TAR629G3242 Trochodendron aralioides HOM05D007132 ORTHO05D009120 7.2e-50 202.2 188 53.2
Sp5g15660 Schrenkiella parvula HOM05D007132 ORTHO05D009120 1.2e-49 201.4 296 41.6
Migut.E01364 Erythranthe guttata HOM05D007132 ORTHO05D009120 1.7e-46 191.0 131 71.0
MCO03G301 Micromonas commoda HOM05D007132 ORTHO05D009120 1.8e-45 187.6 372 34.1
Cfa022513 Carpinus fangiana HOM05D007132 ORTHO05D009120 3.6e-41 173.3 332 35.5
GSVIVG01036861001 Vitis vinifera HOM05D007132 ORTHO05D009120 6.1e-41 172.6 153 54.9
TAR629G3340 Trochodendron aralioides HOM05D007132 ORTHO05D009120 2.3e-40 170.6 153 54.2
Cre03.g175750 Chlamydomonas reinhardtii HOM05D007132 ORTHO05D009120 2.6e-31 140.6 494 24.5
Rhsim11G0036100 Rhododendron simsii HOM05D007132 ORTHO05D009120 4.1e-29 133.3 98 67.3
PRCOL_00004459 Prasinoderma coloniale HOM05D007132 ORTHO05D009120 3.3e-26 123.6 330 28.2
Nitab4.5_0000480g0030 Nicotiana tabacum HOM05D007132 ORTHO05D009120 2.3e-19 100.9 86 55.8
Psat2g145800 Pisum sativum HOM05D007132 ORTHO05D009120 9.8e-15 85.5 68 61.8
Lalb_Chr05g0215031 Lupinus albus HOM05D007132 ORTHO05D009120 8.3e-14 82.4 40 85.0
Haze_08440 Corylus avellana HOM05D000433 ORTHO05D000443 2.4e-13 80.9 62 62.9
CDE11G0272 Ceratophyllum demersum HOM05D000435 ORTHO05D000430 7.0e-13 79.3 111 38.7
Medtr5g032230 Medicago truncatula HOM05D007132 ORTHO05D009120 1.0e-11 75.5 97 46.4
Cre16.g694201 Chlamydomonas reinhardtii HOM05D009332 ORTHO05D044261 2.1e-09 67.8 229 26.6
FAN13G1029 Fragaria x ananassa HOM05D007132 ORTHO05D009181 1.8e-08 64.7 172 32.6
Rhsim11G0036200 Rhododendron simsii HOM05D007132 ORTHO05D009120 1.5e-07 61.6 63 50.8
FAN02G3822 Fragaria x ananassa HOM05D007132 ORTHO05D009120 4.9e-06 56.6 40 57.5
SMO367G0146 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 6.4e-06 56.2 187 27.8


User provided reference genes

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