Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold110G31270 Striga asiatica HOM05D003378 ORTHO05D003942 3.3e-71 271.6 131 100.0
SGA_v2.0_scaffold106G30519 Striga asiatica HOM05D003378 ORTHO05D003942 1.6e-46 189.5 122 79.5
Cfa017247 Carpinus fangiana HOM05D003378 ORTHO05D003942 1.7e-40 169.5 121 71.9
SGA_v2.0_scaffold85G26755 Striga asiatica HOM05D003378 ORTHO05D003942 3.0e-40 168.7 114 72.8
CANSAT35G1853 Cannabis sativa HOM05D003378 ORTHO05D003942 6.6e-40 167.5 129 69.0
Oeu030526.1 Olea europaea HOM05D003378 ORTHO05D003942 6.6e-40 167.5 123 69.9
MSTRG.19023 Avicennia marina HOM05D003378 ORTHO05D003942 1.5e-39 166.4 122 70.5
ClCG10G021890 Citrullus lanatus HOM05D003378 ORTHO05D003942 1.5e-39 166.4 114 71.9
MELO3C009186.2 Cucumis melo HOM05D003378 ORTHO05D003942 1.9e-39 166.0 114 71.9
CiPaw.09G207100 Carya illinoinensis HOM05D003378 ORTHO05D003942 2.5e-39 165.6 117 71.8
Migut.L01997 Erythranthe guttata HOM05D003378 ORTHO05D003942 3.3e-39 165.2 130 68.5
Glyma.03G078300 Glycine max HOM05D003378 ORTHO05D003942 3.3e-39 165.2 134 66.4
CsaV3_3G034100 Cucumis sativus L. HOM05D003378 ORTHO05D003942 4.3e-39 164.9 114 71.9
arahy.Tifrunner.gnm1.ann1.L6AUEE Arachis hypogaea HOM05D003378 ORTHO05D003942 5.6e-39 164.5 120 70.8
arahy.Tifrunner.gnm1.ann1.YIK7D0 Arachis hypogaea HOM05D003378 ORTHO05D003942 5.6e-39 164.5 120 70.8
Duzib093G0826 Durio zibethinus HOM05D003378 ORTHO05D003942 5.6e-39 164.5 130 64.6
Phvul.010G005100 Phaseolus vulgaris HOM05D003378 ORTHO05D003942 5.6e-39 164.5 117 72.6
Ah.02g114930 Amaranthus hybridus HOM05D003378 ORTHO05D003942 7.3e-39 164.1 125 68.8
Glyma.01G113000 Glycine max HOM05D003378 ORTHO05D003942 7.3e-39 164.1 118 72.0
VMungo0331G1068 Vigna mungo HOM05D003378 ORTHO05D003942 7.3e-39 164.1 118 72.0
CARHR211550 Cardamine hirsuta HOM05D003378 ORTHO05D003942 9.6e-39 163.7 123 68.3
Thhalv10013276m.g Eutrema salsugineum HOM05D003378 ORTHO05D003942 1.3e-38 163.3 123 68.3
Manes.09G103000 Manihot esculenta HOM05D003378 ORTHO05D003942 1.3e-38 163.3 121 69.4
Atru.chr8.2207 Acer truncatum HOM05D003378 ORTHO05D003942 1.6e-38 162.9 114 71.1
Actinidia29123 Actinidia chinensis HOM05D003378 ORTHO05D003942 1.6e-38 162.9 122 68.0
AT5G01220 Arabidopsis thaliana HOM05D003378 ORTHO05D003942 1.6e-38 162.9 123 67.5
Oeu015017.1 Olea europaea HOM05D003378 ORTHO05D003942 1.6e-38 162.9 123 69.1
C03p00550 Brassica napus HOM05D003378 ORTHO05D003942 2.1e-38 162.5 117 69.2
BolC3t12621H Brassica oleracea HOM05D003378 ORTHO05D003942 2.1e-38 162.5 117 69.2
Nitab4.5_0004030g0030 Nicotiana tabacum HOM05D003378 ORTHO05D003942 2.1e-38 162.5 129 67.4
Sp6g40570 Schrenkiella parvula HOM05D003378 ORTHO05D003942 2.1e-38 162.5 123 67.5
Thecc.05G020500 Theobroma cacao HOM05D003378 ORTHO05D003942 2.1e-38 162.5 124 66.9
A03p00390 Brassica napus HOM05D003378 ORTHO05D003942 2.8e-38 162.2 114 70.2
BraA03t09430Z Brassica rapa HOM05D003378 ORTHO05D003942 2.8e-38 162.2 114 70.2
Carub.0006s0067 Capsella rubella HOM05D003378 ORTHO05D003942 2.8e-38 162.2 123 67.5
CiPaw.10G154700 Carya illinoinensis HOM05D003378 ORTHO05D003942 2.8e-38 162.2 128 66.4
Cc06_g01590 Coffea canephora HOM05D003378 ORTHO05D003942 2.8e-38 162.2 122 67.2
COL.COLO4_14573 Corchorus olitorius HOM05D003378 ORTHO05D003942 2.8e-38 162.2 126 67.5
Hma1.2p1_0244F.1_g101280 Hydrangea macrophylla HOM05D003378 ORTHO05D003942 3.6e-38 161.8 120 66.7
Actinidia13774 Actinidia chinensis HOM05D003378 ORTHO05D003942 4.8e-38 161.4 121 67.8
Ciclev10011473m.g Citrus clementina HOM05D003378 ORTHO05D003942 4.8e-38 161.4 117 70.1
Gohir.D01G215500 Gossypium hirsutum HOM05D003378 ORTHO05D003942 4.8e-38 161.4 114 70.2
Gorai.002G261700 Gossypium raimondii HOM05D003378 ORTHO05D003942 4.8e-38 161.4 114 70.2
MD04G1148000 Malus domestica HOM05D003378 ORTHO05D003942 4.8e-38 161.4 132 65.2
Hund22726 Selenicereus undatus HOM05D003378 ORTHO05D003942 4.8e-38 161.4 115 70.4
AUR62025812 Chenopodium quinoa HOM05D003378 ORTHO05D003942 6.2e-38 161.0 126 66.7
Gohir.A04G088800 Gossypium hirsutum HOM05D003378 ORTHO05D003942 6.2e-38 161.0 122 65.6
unitig_88.g27657 Utricularia gibba HOM05D003378 ORTHO05D003942 6.2e-38 161.0 118 70.3
Aa31LG1G22850 Aethionema arabicum HOM05D003378 ORTHO05D003942 8.1e-38 160.6 123 67.5
BcaC06g31965 Brassica carinata HOM05D003378 ORTHO05D003942 1.1e-37 160.2 114 69.3
BcaNung02769 Brassica carinata HOM05D003378 ORTHO05D003942 1.1e-37 160.2 113 69.0
BolC9t60189H Brassica oleracea HOM05D003378 ORTHO05D003942 1.1e-37 160.2 113 69.0
Prupe.6G271800 Prunus persica HOM05D003378 ORTHO05D003942 1.1e-37 160.2 110 71.8
Sc01g0006660 Simmondsia chinensis HOM05D003378 ORTHO05D003942 1.1e-37 160.2 118 68.6
AUR62020689 Chenopodium quinoa HOM05D003378 ORTHO05D003942 1.4e-37 159.8 126 66.7
unitig_0.g1457 Utricularia gibba HOM05D003378 ORTHO05D003942 1.8e-37 159.5 117 70.1
EL10Ac5g11530 Beta vulgaris HOM05D003378 ORTHO05D003942 2.4e-37 159.1 128 64.8
C09p74570 Brassica napus HOM05D003378 ORTHO05D003942 2.4e-37 159.1 113 68.1
Manes.08G089250 Manihot esculenta HOM05D003378 ORTHO05D003942 2.4e-37 159.1 109 72.5
vmacro22553 Vaccinium macrocarpon HOM05D003378 ORTHO05D003942 2.4e-37 159.1 122 66.4
Haze_20961 Corylus avellana HOM05D003378 ORTHO05D003942 3.1e-37 158.7 147 59.9
Migut.J00201 Erythranthe guttata HOM05D003378 ORTHO05D003942 3.1e-37 158.7 109 70.6
Psat7g247920 Pisum sativum HOM05D003378 ORTHO05D003942 3.1e-37 158.7 141 61.0
PGSC0003DMG400011091 Solanum tuberosum HOM05D003378 ORTHO05D003942 3.1e-37 158.7 121 66.1
A10p33660 Brassica napus HOM05D003378 ORTHO05D003942 4.0e-37 158.3 113 68.1
Gorai.012G112200 Gossypium raimondii HOM05D003378 ORTHO05D003942 4.0e-37 158.3 122 64.8
MD12G1161400 Malus domestica HOM05D003378 ORTHO05D003942 4.0e-37 158.3 130 63.8
Nitab4.5_0000008g0880 Nicotiana tabacum HOM05D003378 ORTHO05D003942 4.0e-37 158.3 129 66.7
Solyc09g014300.3 Solanum lycopersicum HOM05D003378 ORTHO05D003942 4.0e-37 158.3 130 67.7
Sopen10g034560 Solanum pennellii HOM05D003378 ORTHO05D003942 4.0e-37 158.3 121 66.9
Ca_20313_v3 Cicer arietinum L. HOM05D003378 ORTHO05D003942 5.3e-37 157.9 109 72.5
Potri.006G097600 Populus trichocarpa HOM05D003378 ORTHO05D003942 5.3e-37 157.9 122 68.0
Gohir.D04G129200 Gossypium hirsutum HOM05D003378 ORTHO05D003942 6.9e-37 157.5 122 64.8
Sed0023271 Sechium edule HOM05D003378 ORTHO05D003942 6.9e-37 157.5 128 63.3
THA.LOC104823284 Tarenaya hassleriana HOM05D003378 ORTHO05D003942 6.9e-37 157.5 123 65.9
Sabra06G0075100 Salix brachista HOM05D003378 ORTHO05D003942 9.0e-37 157.1 130 63.8
CSS0025489 Camellia sinensis var. sinensis HOM05D003378 ORTHO05D003942 1.2e-36 156.8 128 62.5
CAN.G355.3 Capsicum annuum HOM05D003378 ORTHO05D003942 1.2e-36 156.8 123 67.5
FvH4_6g11930 Fragaria vesca HOM05D003378 ORTHO05D003942 1.2e-36 156.8 130 62.3
FAN05G4401 Fragaria x ananassa HOM05D003378 ORTHO05D003942 1.2e-36 156.8 130 62.3
FAN14G4021 Fragaria x ananassa HOM05D003378 ORTHO05D003942 1.2e-36 156.8 130 62.3
FAN14G4776 Fragaria x ananassa HOM05D003378 ORTHO05D003942 1.2e-36 156.8 130 62.3
arahy.Tifrunner.gnm1.ann1.EK5UG7 Arachis hypogaea HOM05D003378 ORTHO05D003942 1.5e-36 156.4 125 66.4
FAN02G2254 Fragaria x ananassa HOM05D003378 ORTHO05D003942 1.5e-36 156.4 130 62.3
FAN09G0987 Fragaria x ananassa HOM05D003378 ORTHO05D003942 1.5e-36 156.4 129 62.8
Sopen09g007150 Solanum pennellii HOM05D003378 ORTHO05D003942 1.5e-36 156.4 123 68.3
PGSC0003DMG400020317 Solanum tuberosum HOM05D003378 ORTHO05D003942 1.5e-36 156.4 123 68.3
unitig_27.g24826 Utricularia gibba HOM05D003378 ORTHO05D003942 1.5e-36 156.4 116 69.0
SalBow5G3819 Salvia bowleyana HOM05D003378 ORTHO05D003942 2.0e-36 156.0 114 68.4
SalBow5G4142 Salvia bowleyana HOM05D003378 ORTHO05D003942 2.0e-36 156.0 114 68.4
Solyc10g085100.2 Solanum lycopersicum HOM05D003378 ORTHO05D003942 2.0e-36 156.0 121 66.1
Aqoxy2G00958 Aquilegia oxysepala HOM05D003378 ORTHO05D003942 2.6e-36 155.6 129 65.1
TAR369G0131 Trochodendron aralioides HOM05D003378 ORTHO05D003942 2.6e-36 155.6 120 69.2
arahy.Tifrunner.gnm1.ann1.FDLX2Z Arachis hypogaea HOM05D003378 ORTHO05D003942 3.4e-36 155.2 125 66.4
Rhsim05G0206900 Rhododendron simsii HOM05D003378 ORTHO05D003942 4.4e-36 154.8 122 64.8
RcHm_v2.0_Chr3g0463701 Rosa chinensis HOM05D003378 ORTHO05D003942 5.8e-36 154.5 110 69.1
Sabra16G0108300 Salix brachista HOM05D003378 ORTHO05D003942 5.8e-36 154.5 114 69.3
GSVIVG01033998001 Vitis vinifera HOM05D003378 ORTHO05D003942 5.8e-36 154.5 110 70.0
Cpa.g.sc163.3 Carica papaya HOM05D003378 ORTHO05D003942 7.6e-36 154.1 122 64.8
Potri.016G112600 Populus trichocarpa HOM05D003378 ORTHO05D003942 7.6e-36 154.1 114 69.3
Sed0002007 Sechium edule HOM05D003378 ORTHO05D003942 7.6e-36 154.1 114 68.4
THA.LOC104827042 Tarenaya hassleriana HOM05D003378 ORTHO05D003942 7.6e-36 154.1 110 70.0
ATR0618G034 Amborella trichopoda HOM05D003378 ORTHO05D003942 1.3e-35 153.3 121 66.1
BraA10t45397Z Brassica rapa HOM05D003378 ORTHO05D003942 1.3e-35 153.3 137 57.7
CSS0046394 Camellia sinensis var. sinensis HOM05D003378 ORTHO05D003942 1.3e-35 153.3 118 67.8
CAN.G1297.6 Capsicum annuum HOM05D003378 ORTHO05D003942 1.3e-35 153.3 110 68.2
DCAR_028819 Daucus carota HOM05D003378 ORTHO05D003942 1.3e-35 153.3 114 65.8
Lj3g0001695 Lotus japonicus HOM05D003378 ORTHO05D003942 1.3e-35 153.3 117 70.9
MBI14_g04426_MAGBIO Magnolia biondii HOM05D003378 ORTHO05D003942 1.3e-35 153.3 121 65.3
TWI53G0359 Tripterygium wilfordii HOM05D003378 ORTHO05D003942 1.3e-35 153.3 120 65.0
Rhsim04G0166600 Rhododendron simsii HOM05D003378 ORTHO05D003942 2.2e-35 152.5 122 66.4
TWI77G0412 Tripterygium wilfordii HOM05D003378 ORTHO05D003942 2.2e-35 152.5 126 65.1
Lalb_Chr13g0291251 Lupinus albus HOM05D003378 ORTHO05D003942 2.9e-35 152.1 118 67.8
TPR.G15969 Trifolium pratense HOM05D003378 ORTHO05D003942 2.9e-35 152.1 105 72.4
PGR031G3689 Punica granatum HOM05D003378 ORTHO05D003942 3.8e-35 151.8 115 68.7
Nitab4.5_0000652g0220 Nicotiana tabacum HOM05D003378 ORTHO05D003942 4.9e-35 151.4 110 67.3
TAR623G1156 Trochodendron aralioides HOM05D003378 ORTHO05D003942 4.9e-35 151.4 103 72.8
Nitab4.5_0004912g0010 Nicotiana tabacum HOM05D003378 ORTHO05D003942 6.4e-35 151.0 109 67.9
SalBow4G2524 Salvia bowleyana HOM05D003378 ORTHO05D003942 6.4e-35 151.0 125 62.4
Lalb_Chr03g0043071 Lupinus albus HOM05D003378 ORTHO05D003942 8.4e-35 150.6 109 69.7
Lalb_Chr07g0193451 Lupinus albus HOM05D003378 ORTHO05D003942 8.4e-35 150.6 130 62.3
Actinidia05349 Actinidia chinensis HOM05D003378 ORTHO05D003942 1.1e-34 150.2 125 62.4
Medtr4g015260 Medicago truncatula HOM05D003378 ORTHO05D003942 1.1e-34 150.2 118 66.9
SalBow4G1026 Salvia bowleyana HOM05D003378 ORTHO05D003942 1.1e-34 150.2 108 69.4
HanXRQChr10g0287061 Helianthus annuus HOM05D003378 ORTHO05D003942 1.4e-34 149.8 130 60.8
Os07g0100300 Oryza sativa ssp. japonica HOM05D003378 ORTHO05D003942 2.4e-34 149.1 100 73.0
Lsat_1_v5_gn_9_36000 Lactuca sativa HOM05D003378 ORTHO05D003942 3.2e-34 148.7 108 65.7
Lj2C81T6 Lonicera japonica HOM05D003378 ORTHO05D003942 5.4e-34 147.9 115 67.0
Duzib106G1409 Durio zibethinus HOM05D003378 ORTHO05D003942 9.3e-34 147.1 114 64.0
Nn2g11403 Nelumbo nucifera HOM05D003378 ORTHO05D003942 1.2e-33 146.7 123 65.0
Zm00001eb297970 Zea mays HOM05D003378 ORTHO05D003942 1.6e-33 146.4 100 72.0
Glyma.18G197600 Glycine max HOM05D003378 ORTHO05D003942 2.1e-33 146.0 105 70.5
HanXRQChr11g0329601 Helianthus annuus HOM05D003378 ORTHO05D003942 2.1e-33 146.0 114 64.0
DCAR_024027 Daucus carota HOM05D003378 ORTHO05D003942 2.7e-33 145.6 117 65.8
Lj1g0014660 Lotus japonicus HOM05D003378 ORTHO05D003942 2.7e-33 145.6 105 70.5
PSO339G6012 Papaver somniferum HOM05D003378 ORTHO05D003942 2.7e-33 145.6 110 67.3
PSO801G0661 Papaver somniferum HOM05D003378 ORTHO05D003942 2.7e-33 145.6 110 67.3
ECA248G0513 Erigeron canadensis HOM05D003378 ORTHO05D003942 3.5e-33 145.2 118 63.6
Zm00001eb335670 Zea mays HOM05D003378 ORTHO05D003942 4.6e-33 144.8 127 62.2
CDE02G3708 Ceratophyllum demersum HOM05D003378 ORTHO05D003942 1.0e-32 143.7 121 62.8
Phvul.008G106900 Phaseolus vulgaris HOM05D003378 ORTHO05D003942 1.0e-32 143.7 105 69.5
SMO118G0052 Selaginella moellendorffii HOM05D003378 ORTHO05D003942 1.0e-32 143.7 101 69.3
ECA247G2610 Erigeron canadensis HOM05D003378 ORTHO05D003942 1.3e-32 143.3 127 57.5
Lsat_1_v5_gn_5_155081 Lactuca sativa HOM05D003378 ORTHO05D003942 2.3e-32 142.5 125 60.8
Os01g0142300 Oryza sativa ssp. japonica HOM05D003378 ORTHO05D003942 3.0e-32 142.1 114 67.5
HPP92_012629 Vanilla planifolia HOM05D003378 ORTHO05D003942 3.0e-32 142.1 128 60.2
Ca_07617_v3 Cicer arietinum L. HOM05D003378 ORTHO05D003942 6.6e-32 141.0 119 63.0
Psat3g130760 Pisum sativum HOM05D003378 ORTHO05D003942 6.6e-32 141.0 130 60.0
Medtr7g067340 Medicago truncatula HOM05D003378 ORTHO05D003942 1.9e-31 139.4 100 71.0
TPR.G1566 Trifolium pratense HOM05D003378 ORTHO05D003942 4.3e-31 138.3 105 66.7
HPP92_019420 Vanilla planifolia HOM05D003378 ORTHO05D003942 7.4e-31 137.5 115 64.3
Os03g0265100 Oryza sativa ssp. japonica HOM05D003378 ORTHO05D003942 1.3e-30 136.7 119 61.3
Zm00001eb398000 Zea mays HOM05D003378 ORTHO05D003942 2.1e-30 136.0 119 61.3
SEGI_03332 Sequoiadendron giganteum HOM05D003378 ORTHO05D003942 3.6e-30 135.2 100 67.0
Eucgr.A00516 Eucalyptus grandis HOM05D003378 ORTHO05D003942 4.8e-30 134.8 71 88.7
Lj3C956T2 Lonicera japonica HOM05D003378 ORTHO05D003942 1.8e-29 132.9 71 88.7
BcaC04g19331 Brassica carinata HOM05D003378 ORTHO05D003942 1.5e-28 129.8 71 83.1
C09p67290 Brassica napus HOM05D003378 ORTHO05D003942 1.5e-28 129.8 71 83.1
Pp3c9_8520 Physcomitrium patens HOM05D003378 ORTHO05D003942 2.0e-28 129.4 120 54.2
Mapoly0129s0040 Marchantia polymorpha HOM05D003378 ORTHO05D003942 2.6e-28 129.0 101 66.3
Pp3c15_4410 Physcomitrium patens HOM05D003378 ORTHO05D003942 2.6e-28 129.0 100 64.0
BcaC03g15346 Brassica carinata HOM05D003378 ORTHO05D003942 6.4e-27 124.4 71 78.9
C02p29520 Brassica napus HOM05D003378 ORTHO05D003942 6.4e-27 124.4 71 78.9
CBR_g3329 Chara braunii HOM05D003378 ORTHO05D003942 1.9e-26 122.9 100 60.0
AL6G10970 Arabidopsis lyrata HOM05D003378 ORTHO05D003942 4.2e-26 121.7 64 85.9
Dinv14534 Davidia involucrata HOM05D003378 ORTHO05D003942 4.2e-26 121.7 64 87.5
BcaC07g38722 Brassica carinata HOM05D003378 ORTHO05D003942 7.1e-26 120.9 71 78.9
Gohir.A01G225800 Gossypium hirsutum HOM05D003378 ORTHO05D003942 7.1e-26 120.9 64 87.5
vmacro08599 Vaccinium macrocarpon HOM05D003378 ORTHO05D003942 3.5e-25 118.6 124 54.8
AagrBONN_evm.TU.Sc2ySwM_228.713 Anthoceros agrestis HOM05D003378 ORTHO05D003942 1.3e-24 116.7 102 58.8
Peaxi162Scf00141g00615 Petunia axillaris HOM05D003378 ORTHO05D003942 1.3e-24 116.7 90 63.3
Zm00001eb011720 Zea mays HOM05D003378 ORTHO05D003942 1.3e-24 116.7 71 77.5
Actinidia01107 Actinidia chinensis HOM05D003378 ORTHO05D003942 4.3e-23 111.7 64 79.7
A01p03650 Brassica napus HOM05D003378 ORTHO05D003942 1.4e-21 106.7 71 70.4
Glyma.07G146400 Glycine max HOM05D003378 ORTHO05D003942 1.4e-21 106.7 59 84.7
Peaxi162Scf00009g01921 Petunia axillaris HOM05D003378 ORTHO05D003942 2.0e-20 102.8 71 70.4
Duzib128G1405 Durio zibethinus HOM05D003378 ORTHO05D003942 2.5e-18 95.9 89 57.3
HanXRQChr04g0127691 Helianthus annuus HOM05D003378 ORTHO05D003942 7.1e-18 94.4 59 74.6
BcaC06g31967 Brassica carinata HOM05D003378 ORTHO05D003942 9.3e-18 94.0 79 59.5
Cre01.g038550 Chlamydomonas reinhardtii HOM05D003378 ORTHO05D003942 6.0e-17 91.3 144 38.2
A02p30150 Brassica napus HOM05D003378 ORTHO05D018651 6.3e-14 81.3 45 82.2
EL10Ac5g11512 Beta vulgaris HOM05D003378 ORTHO05D003942 1.9e-10 69.7 36 88.9
PRCOL_00001337 Prasinoderma coloniale HOM05D003378 ORTHO05D003942 3.2e-10 68.9 113 39.8
MCO07G378 Micromonas commoda HOM05D003378 ORTHO05D003942 4.6e-09 65.1 101 37.6
Sp1g36510 Schrenkiella parvula HOM05D003378 ORTHO05D003942 1.9e-07 59.7 38 71.1


User provided reference genes

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