Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold110G31234 Striga asiatica HOM05D002664 ORTHO05D402769 4.6e-141 504.6 261 100.0
Rhsim03G0164400 Rhododendron simsii HOM05D002664 ORTHO05D002974 1.1e-09 68.2 88 38.6
Oeu031401.1 Olea europaea HOM05D002664 ORTHO05D002974 1.9e-09 67.4 54 64.8
unitig_37.g11928 Utricularia gibba HOM05D002664 ORTHO05D002974 2.4e-09 67.0 54 61.1
unitig_92.g28270 Utricularia gibba HOM05D002664 ORTHO05D002974 5.4e-09 65.9 54 59.3
vmacro06820 Vaccinium macrocarpon HOM05D002664 ORTHO05D002974 5.4e-09 65.9 88 40.9
Nitab4.5_0001358g0010 Nicotiana tabacum HOM05D002664 ORTHO05D002974 1.2e-08 64.7 54 57.4
Cc02_g04490 Coffea canephora HOM05D002664 ORTHO05D002974 1.6e-08 64.3 54 61.1
Peaxi162Scf00271g00835 Petunia axillaris HOM05D002664 ORTHO05D002974 2.7e-08 63.5 54 55.6
SalBow7G2446 Salvia bowleyana HOM05D002664 ORTHO05D002974 2.7e-08 63.5 54 57.4
Nitab4.5_0001267g0070 Nicotiana tabacum HOM05D002664 ORTHO05D002974 6.0e-08 62.4 54 55.6
Sed0022620 Sechium edule HOM05D002664 ORTHO05D002974 6.0e-08 62.4 125 36.0
SGA_v2.0_scaffold2G01230 Striga asiatica HOM05D002664 ORTHO05D003901 6.0e-08 62.4 54 59.3
CAN.G485.5 Capsicum annuum HOM05D002664 ORTHO05D002974 1.0e-07 61.6 54 55.6
DCAR_009450 Daucus carota HOM05D002664 ORTHO05D002974 1.0e-07 61.6 61 52.5
Migut.F00502 Erythranthe guttata HOM05D002664 ORTHO05D002974 1.0e-07 61.6 47 66.0
Sed0006781 Sechium edule HOM05D002664 ORTHO05D002974 1.0e-07 61.6 115 36.5
CSS0031825 Camellia sinensis var. sinensis HOM05D002664 ORTHO05D002974 1.3e-07 61.2 54 55.6
CSS0043630 Camellia sinensis var. sinensis HOM05D002664 ORTHO05D002974 1.3e-07 61.2 54 55.6
ClCG01G001100 Citrullus lanatus HOM05D002664 ORTHO05D002974 1.3e-07 61.2 81 45.7
Gohir.A07G042500 Gossypium hirsutum HOM05D002664 ORTHO05D002974 1.3e-07 61.2 75 46.7
Gohir.D07G046800 Gossypium hirsutum HOM05D002664 ORTHO05D002974 1.3e-07 61.2 75 46.7
Gorai.001G049900 Gossypium raimondii HOM05D002664 ORTHO05D002974 1.3e-07 61.2 75 46.7
Actinidia24983 Actinidia chinensis HOM05D002664 ORTHO05D002974 2.3e-07 60.5 54 55.6
EL10Ac1g00496 Beta vulgaris HOM05D002664 ORTHO05D002974 3.0e-07 60.1 73 43.8
Dinv06579 Davidia involucrata HOM05D002664 ORTHO05D002974 3.0e-07 60.1 54 53.7
MELO3C005824.2 Cucumis melo HOM05D002664 ORTHO05D002974 3.9e-07 59.7 81 44.4
CsaV3_5G001230 Cucumis sativus L. HOM05D002664 ORTHO05D002974 3.9e-07 59.7 81 44.4
Duzib205G0977 Durio zibethinus HOM05D002664 ORTHO05D002974 3.9e-07 59.7 88 39.8
Actinidia13593 Actinidia chinensis HOM05D002664 ORTHO05D002974 5.1e-07 59.3 54 55.6
unitig_52.g17768 Utricularia gibba HOM05D002664 ORTHO05D002974 5.1e-07 59.3 54 57.4
Solyc03g093370.2 Solanum lycopersicum HOM05D002664 ORTHO05D002974 6.6e-07 58.9 54 53.7
Sopen03g024180 Solanum pennellii HOM05D002664 ORTHO05D002974 6.6e-07 58.9 54 53.7
Lalb_Chr19g0133131 Lupinus albus HOM05D002664 ORTHO05D002974 8.6e-07 58.5 64 45.3
PGSC0003DMG400018845 Solanum tuberosum HOM05D002664 ORTHO05D002974 8.6e-07 58.5 54 53.7
Ah.02g111390 Amaranthus hybridus HOM05D002664 ORTHO05D002974 1.1e-06 58.2 82 40.2
Cfa008177 Carpinus fangiana HOM05D002664 ORTHO05D002974 1.5e-06 57.8 58 50.0
CiPaw.03G093900 Carya illinoinensis HOM05D002664 ORTHO05D002974 1.5e-06 57.8 58 50.0
Duzib084G0247 Durio zibethinus HOM05D002664 ORTHO05D002974 1.9e-06 57.4 58 51.7
Manes.14G037800 Manihot esculenta HOM05D002664 ORTHO05D002974 1.9e-06 57.4 58 50.0
GSVIVG01003609001 Vitis vinifera HOM05D002664 ORTHO05D002974 1.9e-06 57.4 54 50.0
Sc09g0006820 Simmondsia chinensis HOM05D002664 ORTHO05D002974 2.5e-06 57.0 54 51.9
Thecc.03G151700 Theobroma cacao HOM05D002664 ORTHO05D002974 2.5e-06 57.0 58 51.7
GSVIVG01002693001 Vitis vinifera HOM05D002664 ORTHO05D002974 2.5e-06 57.0 54 50.0
FAN26G0702 Fragaria x ananassa HOM05D002664 ORTHO05D002974 3.3e-06 56.6 60 46.7
Lj3g0010591 Lotus japonicus HOM05D002664 ORTHO05D002974 3.3e-06 56.6 59 47.5
Phvul.011G181300 Phaseolus vulgaris HOM05D002664 ORTHO05D002974 3.3e-06 56.6 63 44.4
Rhsim09G0190200 Rhododendron simsii HOM05D002664 ORTHO05D002974 3.3e-06 56.6 47 59.6
VMungo1127G2068 Vigna mungo HOM05D002664 ORTHO05D002974 3.3e-06 56.6 63 42.9
Cpa.g.sc138.28 Carica papaya HOM05D002664 ORTHO05D002974 4.3e-06 56.2 64 46.9
COL.COLO4_33536 Corchorus olitorius HOM05D002664 ORTHO05D002974 4.3e-06 56.2 54 53.7
Sabra03G0073600 Salix brachista HOM05D002664 ORTHO05D002974 4.3e-06 56.2 58 48.3
vmacro09917 Vaccinium macrocarpon HOM05D002664 ORTHO05D002974 4.3e-06 56.2 46 60.9
Potri.003G106800 Populus trichocarpa HOM05D002664 ORTHO05D002974 5.6e-06 55.8 58 48.3
Sabra19G0001700 Salix brachista HOM05D002664 ORTHO05D002974 5.6e-06 55.8 73 42.5
Hma1.2p1_1132F.1_g260130 Hydrangea macrophylla HOM05D002664 ORTHO05D002974 7.3e-06 55.5 54 51.9
Manes.12G081700 Manihot esculenta HOM05D002664 ORTHO05D002974 7.3e-06 55.5 57 52.6
RcHm_v2.0_Chr2g0120161 Rosa chinensis HOM05D002664 ORTHO05D002974 7.3e-06 55.5 58 46.6
Sabra19G0011000 Salix brachista HOM05D002664 ORTHO05D002974 7.3e-06 55.5 73 42.5
COL.COLO4_14079 Corchorus olitorius HOM05D002664 ORTHO05D002974 9.6e-06 55.1 57 50.9
FAN28G1456 Fragaria x ananassa HOM05D002664 ORTHO05D002974 9.6e-06 55.1 70 41.4
SHI14034 Sapria himalayana HOM05D002664 ORTHO05D002974 9.6e-06 55.1 58 46.6
TWI74G1217 Tripterygium wilfordii HOM05D002664 ORTHO05D002974 9.6e-06 55.1 58 50.0


User provided reference genes

Program Settings