Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 2.0e-281 971.8 510 100.0
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 1.3e-264 916.0 510 92.5
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 2.2e-264 915.2 510 92.4
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 1.4e-263 912.5 510 92.0
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 1.6e-262 909.1 502 95.0
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 6.6e-261 903.7 510 91.2
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 8.1e-259 896.7 510 90.4
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 8.1e-259 896.7 510 89.6
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 1.8e-258 895.6 510 89.6
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 3.1e-258 894.8 510 89.4
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 3.1e-258 894.8 510 90.6
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 3.1e-258 894.8 510 89.6
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 6.8e-258 893.6 510 90.0
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 2.6e-257 891.7 510 90.0
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 4.4e-257 891.0 510 91.0
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 4.4e-257 891.0 510 89.0
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 5.8e-257 890.6 510 88.8
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 5.8e-257 890.6 510 89.4
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 9.8e-257 889.8 510 89.8
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 2.9e-256 888.3 510 89.4
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 4.9e-256 887.5 510 88.6
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 1.9e-255 885.6 511 88.6
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 2.4e-255 885.2 510 88.8
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 9.2e-255 883.2 510 88.2
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 1.2e-254 882.9 510 88.6
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.6e-254 882.5 512 88.9
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 2.7e-254 881.7 511 88.1
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 2.7e-254 881.7 510 88.8
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 2.7e-254 881.7 510 88.4
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 3.5e-254 881.3 511 89.0
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 4.6e-254 880.9 510 88.8
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 4.6e-254 880.9 510 88.6
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 4.6e-254 880.9 510 87.3
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 7.8e-254 880.2 510 88.0
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 1.7e-253 879.0 511 88.5
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 1.7e-253 879.0 510 87.1
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 2.3e-253 878.6 510 87.5
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 3.0e-253 878.2 510 87.6
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 3.0e-253 878.2 510 88.0
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 8.6e-253 876.7 511 88.1
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 8.6e-253 876.7 510 88.4
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 1.1e-252 876.3 510 88.2
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 1.9e-252 875.5 510 88.4
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 2.5e-252 875.2 511 87.9
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 3.3e-252 874.8 510 87.1
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 3.3e-252 874.8 510 86.7
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 4.3e-252 874.4 511 88.1
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 5.6e-252 874.0 511 87.7
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 5.6e-252 874.0 510 86.7
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 7.3e-252 873.6 510 87.6
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 9.5e-252 873.2 510 87.3
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 9.5e-252 873.2 510 88.4
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 1.6e-251 872.5 510 87.1
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 3.6e-251 871.3 510 87.8
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 4.7e-251 870.9 510 86.3
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 4.7e-251 870.9 510 86.9
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 6.2e-251 870.5 510 86.7
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 8.1e-251 870.2 509 87.0
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 1.1e-250 869.8 510 87.5
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 1.4e-250 869.4 511 86.9
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 1.8e-250 869.0 510 87.5
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 3.1e-250 868.2 510 86.3
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 5.2e-250 867.5 510 87.5
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 1.2e-249 866.3 510 86.5
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 1.2e-249 866.3 510 86.5
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 1.5e-249 865.9 510 87.8
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 2.0e-249 865.5 510 87.3
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 2.6e-249 865.1 510 86.5
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 2.6e-249 865.1 511 86.3
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 4.4e-249 864.4 510 86.7
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 5.8e-249 864.0 511 85.9
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 7.6e-249 863.6 510 86.3
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 2.2e-248 862.1 510 86.5
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 6.4e-248 860.5 510 86.1
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 2.4e-247 858.6 510 85.9
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 3.2e-247 858.2 510 86.7
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 5.4e-247 857.4 510 85.9
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 7.1e-247 857.1 510 86.5
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 7.1e-247 857.1 510 85.9
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 9.2e-247 856.7 527 84.8
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 2.7e-246 855.1 510 85.7
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 3.5e-246 854.7 511 85.7
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 3.5e-246 854.7 510 85.7
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 7.8e-246 853.6 510 85.5
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 1.0e-245 853.2 510 86.3
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.3e-245 852.8 510 86.5
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 1.3e-245 852.8 510 85.3
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 2.3e-245 852.0 510 86.3
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 8.6e-245 850.1 549 80.7
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.5e-244 849.4 510 85.5
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 4.3e-244 847.8 510 85.9
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 1.2e-243 846.3 511 85.1
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 1.6e-243 845.9 510 85.5
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.6e-243 845.9 510 85.5
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.6e-243 845.9 510 85.5
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 8.9e-242 840.1 510 83.7
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 2.0e-241 839.0 512 85.0
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 5.8e-241 837.4 511 84.3
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 5.8e-241 837.4 510 83.7
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 9.9e-241 836.6 524 82.3
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 2.9e-240 835.1 510 84.3
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 2.9e-240 835.1 510 84.3
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 3.8e-240 834.7 510 84.1
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 8.4e-240 833.6 510 84.1
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 8.4e-240 833.6 547 81.2
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 2.4e-239 832.0 494 87.7
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 2.4e-239 832.0 511 83.6
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 3.2e-239 831.6 511 83.6
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 4.2e-239 831.2 505 85.5
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 5.4e-239 830.9 511 84.3
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 3.5e-238 828.2 512 83.8
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 3.0e-237 825.1 494 84.8
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 1.9e-236 822.4 494 85.2
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 2.8e-235 818.5 492 84.1
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 8.1e-235 817.0 472 89.0
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 8.1e-235 817.0 494 85.6
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 1.4e-234 816.2 494 85.8
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 5.3e-234 814.3 511 82.8
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 3.8e-232 808.1 556 76.8
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.4e-231 806.2 511 80.2
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 3.2e-231 805.1 510 82.7
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 1.8e-229 799.3 511 82.0
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.1e-226 790.0 511 78.7
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 2.4e-226 788.9 512 80.9
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 4.9e-224 781.2 512 79.9
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.6e-222 776.2 524 78.4
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.6e-222 776.2 524 78.4
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.0e-221 773.5 510 79.2
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 1.5e-212 743.0 440 85.9
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 7.9e-206 720.7 472 81.8
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 2.5e-204 715.7 511 75.0
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.9e-199 699.5 510 73.7
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 7.2e-199 697.6 413 86.7
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 6.1e-198 694.5 503 73.6
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 7.7e-193 677.6 514 65.8
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.0e-188 662.9 503 68.2
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 5.9e-185 651.4 468 74.1
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 1.3e-179 633.6 375 85.6
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 9.4e-175 617.5 514 60.1
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 3.4e-172 609.0 382 84.0
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 4.1e-170 602.1 364 85.2
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 4.5e-169 598.6 522 61.1
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 5.5e-167 591.7 504 66.7
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 1.6e-166 590.1 379 80.5
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 6.1e-166 588.2 512 59.4
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 8.9e-165 584.3 496 58.9
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 1.6e-161 573.5 325 91.7
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 8.0e-158 561.2 347 83.6
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 5.7e-156 555.1 499 55.3
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 5.6e-151 538.5 457 67.8
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 8.3e-147 524.6 307 88.3
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 4.4e-140 502.3 284 91.2
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 6.2e-134 481.9 383 63.7
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.8e-125 453.8 254 90.9
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 1.2e-116 424.5 513 46.6
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.7e-113 413.3 245 87.8
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 3.8e-107 392.9 487 45.2
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 8.4e-107 391.7 386 54.4
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 5.3e-101 372.5 267 75.3
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 6.0e-97 359.0 519 38.3
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.9e-83 313.5 199 84.9
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.6e-73 280.0 345 46.7
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 5.9e-68 262.7 503 38.6
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 2.7e-60 237.3 144 84.7
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.2e-58 230.3 289 45.0
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 3.7e-54 216.9 368 39.1
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 1.6e-49 201.4 117 83.8
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.1e-45 188.7 206 51.0
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 1.2e-44 185.3 143 72.0
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.0e-43 179.9 197 50.3
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 2.0e-36 157.9 106 78.3
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.3e-30 138.7 119 54.6
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 4.1e-29 133.7 82 86.6
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 4.9e-22 110.2 156 46.8
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 1.3e-11 75.5 63 60.3
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 1.5e-10 72.0 39 87.2
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 2.1e-09 68.2 37 86.5


User provided reference genes

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