Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold110G31193 Striga asiatica HOM05D008779 ORTHO05D010486 4.0e-89 331.6 199 100.0
QL07p034176 Quercus lobata HOM05D008779 ORTHO05D010486 3.6e-13 79.3 199 40.7
MSTRG.26830 Avicennia marina HOM05D008779 ORTHO05D010486 1.8e-12 77.0 119 42.9
Oeu038727.1 Olea europaea HOM05D008779 ORTHO05D010486 1.8e-12 77.0 197 35.5
FAN05G1839 Fragaria x ananassa HOM05D008779 ORTHO05D010486 8.9e-12 74.7 141 41.8
FAN05G2483 Fragaria x ananassa HOM05D008779 ORTHO05D010486 8.9e-12 74.7 141 41.8
FvH4_6g10791 Fragaria vesca HOM05D008779 ORTHO05D010486 2.6e-11 73.2 141 41.1
Cc06_g00910 Coffea canephora HOM05D008779 ORTHO05D010486 5.8e-11 72.0 232 31.5
Solyc09g015450.3 Solanum lycopersicum HOM05D020890 ORTHO05D010486 7.5e-11 71.6 119 41.2
Sopen09g009150 Solanum pennellii HOM05D020890 ORTHO05D010486 9.8e-11 71.2 119 39.5
RcHm_v2.0_Chr3g0461831 Rosa chinensis HOM05D008779 ORTHO05D010486 1.3e-10 70.9 133 42.1
FAN09G1051 Fragaria x ananassa HOM05D008779 ORTHO05D010486 2.9e-10 69.7 162 37.0
CSS0011066 Camellia sinensis var. sinensis HOM05D008779 ORTHO05D010486 4.9e-10 68.9 112 44.6
Nitab4.5_0000230g0080 Nicotiana tabacum HOM05D020890 ORTHO05D010486 4.9e-10 68.9 99 42.4
Glyma.18G205400 Glycine max HOM05D008779 ORTHO05D010486 1.9e-09 67.0 192 31.8
PGSC0003DMG400029193 Solanum tuberosum HOM05D020890 ORTHO05D010486 2.4e-09 66.6 129 38.8
Hma1.2p1_0479F.1_g161570 Hydrangea macrophylla HOM05D008779 ORTHO05D010486 1.2e-08 64.3 184 41.3
Ca_07682_v3 Cicer arietinum L. HOM05D008779 ORTHO05D010486 1.0e-07 61.2 209 33.0
Ciclev10013473m.g Citrus clementina HOM05D008779 ORTHO05D010486 3.0e-07 59.7 158 36.7
Potri.006G103600 Populus trichocarpa HOM05D008779 ORTHO05D010486 3.0e-07 59.7 194 30.9
CiPaw.09G213700 Carya illinoinensis HOM05D008779 ORTHO05D010486 3.9e-07 59.3 200 34.5
CANSAT35G0132 Cannabis sativa HOM05D008779 ORTHO05D010486 6.6e-07 58.5 153 37.3
Prupe.6G283500 Prunus persica HOM05D008779 ORTHO05D010486 6.6e-07 58.5 226 33.6
Nn2g10979 Nelumbo nucifera HOM05D008779 ORTHO05D010486 8.6e-07 58.2 135 39.3
Sabra16G0118800 Salix brachista HOM05D008779 ORTHO05D010486 8.6e-07 58.2 35 77.1
Gorai.012G118400 Gossypium raimondii HOM05D020259 ORTHO05D010486 1.1e-06 57.8 194 36.6
TAR623G1357 Trochodendron aralioides HOM05D008779 ORTHO05D010486 1.1e-06 57.8 151 38.4
HanXRQChr01g0006341 Helianthus annuus HOM05D034147 ORTHO05D010486 1.5e-06 57.4 99 43.4
Nitab4.5_0004676g0050 Nicotiana tabacum HOM05D020890 ORTHO05D010486 2.5e-06 56.6 182 33.5
Atru.chr8.2317 Acer truncatum HOM05D008779 ORTHO05D010486 3.3e-06 56.2 147 41.5
TWI53G1291 Tripterygium wilfordii HOM05D008779 ORTHO05D010486 7.3e-06 55.1 213 33.8


User provided reference genes

Program Settings