Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 0.0e+00 1287.3 657 100.0
SGA_v2.0_scaffold110G31175 Striga asiatica HOM05D052586 ORTHO05D406407 2.6e-225 785.8 405 96.5
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 5.8e-76 289.7 240 63.3
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 1.4e-45 188.7 121 66.1
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 1.2e-41 175.6 113 65.5
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 3.9e-40 170.6 211 42.2
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 1.5e-39 168.7 148 50.7
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 3.3e-39 167.5 116 58.6
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 5.7e-39 166.8 112 61.6
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 9.7e-39 166.0 112 60.7
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 2.8e-38 164.5 112 60.7
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 1.1e-37 162.5 112 59.8
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 2.4e-37 161.4 112 59.8
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 2.4e-37 161.4 114 62.3
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 3.1e-37 161.0 113 60.2
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 4.1e-37 160.6 143 49.7
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 6.9e-37 159.8 113 58.4
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 9.1e-37 159.5 113 59.3
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 2.6e-36 157.9 113 55.8
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 4.5e-36 157.1 112 57.1
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 5.9e-36 156.8 118 55.9
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 1.0e-35 156.0 142 45.1
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.7e-35 155.2 113 56.6
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 1.7e-35 155.2 113 56.6
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 2.2e-35 154.8 113 56.6
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 3.8e-35 154.1 147 46.9
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 5.0e-35 153.7 113 56.6
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 6.5e-35 153.3 113 54.0
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 6.5e-35 153.3 112 55.4
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 8.5e-35 152.9 141 42.6
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.1e-34 152.5 113 55.8
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 1.4e-34 152.1 111 57.7
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.9e-34 151.8 145 48.3
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.9e-34 151.8 145 48.3
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 2.5e-34 151.4 148 44.6
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 2.5e-34 151.4 113 55.8
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 3.2e-34 151.0 145 49.0
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 4.2e-34 150.6 116 53.4
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 4.2e-34 150.6 119 50.4
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 5.5e-34 150.2 113 57.5
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 5.5e-34 150.2 114 57.9
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 7.2e-34 149.8 113 54.0
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 7.2e-34 149.8 145 47.6
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 7.2e-34 149.8 113 52.2
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 1.2e-33 149.1 115 53.0
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 1.2e-33 149.1 130 50.8
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 1.6e-33 148.7 112 54.5
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 1.6e-33 148.7 115 53.0
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 1.6e-33 148.7 148 47.3
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 2.1e-33 148.3 115 53.0
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 3.6e-33 147.5 113 53.1
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 4.7e-33 147.1 145 46.9
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 4.7e-33 147.1 113 51.3
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 4.7e-33 147.1 120 48.3
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 6.1e-33 146.7 113 51.3
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.0e-32 146.0 113 51.3
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 1.0e-32 146.0 119 52.1
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 1.8e-32 145.2 115 51.3
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 2.3e-32 144.8 115 51.3
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 2.3e-32 144.8 115 51.3
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 2.3e-32 144.8 115 51.3
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 3.0e-32 144.4 114 55.3
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 3.0e-32 144.4 141 46.1
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 3.0e-32 144.4 143 44.1
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 3.9e-32 144.1 114 51.8
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 1.5e-31 142.1 113 50.4
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 2.0e-31 141.7 113 49.6
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 2.0e-31 141.7 119 49.6
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 3.3e-31 141.0 143 42.0
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 4.4e-31 140.6 113 54.0
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 7.4e-31 139.8 117 53.0
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 9.7e-31 139.4 116 50.0
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 9.7e-31 139.4 117 46.2
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 1.3e-30 139.0 147 41.5
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 2.8e-30 137.9 114 49.1
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 3.7e-30 137.5 116 50.0
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 6.3e-30 136.7 117 47.0
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.1e-29 136.0 105 57.1
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.1e-29 136.0 105 57.1
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 1.4e-29 135.6 117 49.6
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 4.1e-29 134.0 117 48.7
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 5.3e-29 133.7 117 47.9
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 5.3e-29 133.7 104 55.8
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 7.0e-29 133.3 117 47.0
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 9.1e-29 132.9 151 41.7
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 9.1e-29 132.9 117 47.9
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 1.2e-28 132.5 117 49.6
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 1.2e-28 132.5 117 47.0
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 1.2e-28 132.5 117 47.0
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 2.0e-28 131.7 117 47.9
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 2.2e-27 128.3 113 47.8
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 5.0e-27 127.1 112 48.2
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 8.5e-27 126.3 117 53.0
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 4.2e-26 124.0 145 39.3
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 6.1e-25 120.2 100 50.0
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 1.8e-24 118.6 119 49.6
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 5.2e-24 117.1 111 50.5
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 8.8e-24 116.3 152 39.5
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 1.4e-21 109.0 143 37.8
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 1.2e-20 105.9 115 41.7
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 4.5e-20 104.0 111 42.3
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 1.1e-18 99.4 116 36.2
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 1.1e-18 99.4 116 36.2
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 1.9e-18 98.6 79 50.6
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 8.0e-17 93.2 119 36.1
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 5.3e-13 80.5 110 36.4
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 9.4e-10 69.7 101 31.7
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 7.5e-07 60.1 33 72.7


User provided reference genes

Program Settings