Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold110G31173 Striga asiatica HOM05D006648 ORTHO05D008253 1.7e-134 482.6 238 100.0
SGA_v2.0_scaffold164G38119 Striga asiatica HOM05D006648 ORTHO05D008253 4.7e-100 368.2 228 81.6
Migut.D02056 Erythranthe guttata HOM05D006648 ORTHO05D008253 1.7e-46 190.3 172 58.7
PGSC0003DMG401013914 Solanum tuberosum HOM05D006648 ORTHO05D008253 1.5e-42 177.2 196 51.5
SalBow1G6461 Salvia bowleyana HOM05D006648 ORTHO05D008253 4.4e-42 175.6 173 57.2
Cc04_g08730 Coffea canephora HOM05D006648 ORTHO05D008253 9.9e-42 174.5 168 52.4
Solyc12g027800.1 Solanum lycopersicum HOM05D006648 ORTHO05D008253 1.2e-39 167.5 152 57.2
Sopen12g013090 Solanum pennellii HOM05D006648 ORTHO05D008253 2.1e-39 166.8 152 57.2
Cfa012641 Carpinus fangiana HOM05D006648 ORTHO05D008253 6.6e-38 161.8 134 61.2
Dinv04104 Davidia involucrata HOM05D006648 ORTHO05D008253 8.6e-38 161.4 156 55.1
TWI15G0343 Tripterygium wilfordii HOM05D006648 ORTHO05D008253 2.5e-37 159.8 159 55.3
Haze_08018 Corylus avellana HOM05D006648 ORTHO05D008253 3.3e-37 159.5 134 59.7
Peaxi162Scf00358g00410 Petunia axillaris HOM05D006648 ORTHO05D008253 3.3e-37 159.5 162 54.3
unitig_0.g24 Utricularia gibba HOM05D006648 ORTHO05D008253 3.3e-37 159.5 180 50.0
Lsat_1_v5_gn_0_10520 Lactuca sativa HOM05D006648 ORTHO05D008253 4.3e-37 159.1 165 49.7
Potri.015G029600 Populus trichocarpa HOM05D006648 ORTHO05D008253 1.6e-36 157.1 132 61.4
CAN.G94.9 Capsicum annuum HOM05D006648 ORTHO05D008253 2.1e-36 156.8 172 51.2
Manes.02G213372 Manihot esculenta HOM05D006648 ORTHO05D008253 2.1e-36 156.8 132 60.6
Nn4g24907 Nelumbo nucifera HOM05D006648 ORTHO05D008253 2.1e-36 156.8 134 57.5
Gohir.D07G067000 Gossypium hirsutum HOM05D006648 ORTHO05D008253 3.6e-36 156.0 180 48.3
Gorai.001G070600 Gossypium raimondii HOM05D006648 ORTHO05D008253 3.6e-36 156.0 180 48.3
TAR629G3357 Trochodendron aralioides HOM05D006648 ORTHO05D008253 6.2e-36 155.2 134 56.7
Gohir.A07G062400 Gossypium hirsutum HOM05D006648 ORTHO05D008253 2.4e-35 153.3 180 47.8
CANSAT01G2528 Cannabis sativa HOM05D006648 ORTHO05D008253 4.0e-35 152.5 136 55.1
Lalb_Chr05g0221351 Lupinus albus HOM05D006648 ORTHO05D008253 8.9e-35 151.4 135 56.3
CiPaw.15G092300 Carya illinoinensis HOM05D006648 ORTHO05D008253 1.5e-34 150.6 134 56.0
Sc12g0007810 Simmondsia chinensis HOM05D006648 ORTHO05D008253 1.5e-34 150.6 131 59.5
MELO3C009853.2 Cucumis melo HOM05D006648 ORTHO05D008253 2.0e-34 150.2 185 47.6
Ca_17156_v3 Cicer arietinum L. HOM05D006648 ORTHO05D008253 5.8e-34 148.7 135 54.8
ClCG10G015270 Citrullus lanatus HOM05D006648 ORTHO05D008253 5.8e-34 148.7 183 47.0
Duzib205G0071 Durio zibethinus HOM05D006648 ORTHO05D008253 5.8e-34 148.7 132 54.5
Sed0021957 Sechium edule HOM05D006648 ORTHO05D008253 1.3e-33 147.5 132 56.8
ATR0618G275 Amborella trichopoda HOM05D006648 ORTHO05D008253 2.2e-33 146.7 135 56.3
Actinidia35145 Actinidia chinensis HOM05D006648 ORTHO05D008253 6.4e-33 145.2 155 51.0
THA.LOC104810632 Tarenaya hassleriana HOM05D006648 ORTHO05D008253 6.4e-33 145.2 144 54.9
DCAR_014746 Daucus carota HOM05D006648 ORTHO05D008253 8.4e-33 144.8 138 53.6
Aa31LG7G2660 Aethionema arabicum HOM05D006648 ORTHO05D008253 1.4e-32 144.1 149 52.3
vmacro16390 Vaccinium macrocarpon HOM05D006648 ORTHO05D008253 3.2e-32 142.9 137 52.6
arahy.Tifrunner.gnm1.ann1.NPI4TW Arachis hypogaea HOM05D006648 ORTHO05D008253 4.2e-32 142.5 134 56.0
arahy.Tifrunner.gnm1.ann1.WU90Y9 Arachis hypogaea HOM05D006648 ORTHO05D008253 4.2e-32 142.5 134 56.0
Lj5A166T76 Lonicera japonica HOM05D006648 ORTHO05D008253 7.1e-32 141.7 149 50.3
Medtr3g006290 Medicago truncatula HOM05D006648 ORTHO05D008253 7.1e-32 141.7 146 51.4
Thecc.03G074500 Theobroma cacao HOM05D006648 ORTHO05D008253 7.1e-32 141.7 132 52.3
TPR.G30054 Trifolium pratense HOM05D006648 ORTHO05D008253 7.1e-32 141.7 128 56.2
A06p13910 Brassica napus HOM05D006648 ORTHO05D008253 1.2e-31 141.0 132 53.8
Prupe.5G242000 Prunus persica HOM05D006648 ORTHO05D008253 1.2e-31 141.0 152 49.3
Sp1g15930 Schrenkiella parvula HOM05D006648 ORTHO05D008253 1.2e-31 141.0 142 54.9
CARHR018460 Cardamine hirsuta HOM05D006648 ORTHO05D008253 1.6e-31 140.6 132 55.3
Thhalv10007680m.g Eutrema salsugineum HOM05D006648 ORTHO05D008253 1.6e-31 140.6 144 53.5
Sabra15G0024800 Salix brachista HOM05D006648 ORTHO05D008253 1.6e-31 140.6 186 46.8
Ciclev10020172m.g Citrus clementina HOM05D006648 ORTHO05D008253 2.1e-31 140.2 131 52.7
HanXRQChr16g0503321 Helianthus annuus HOM05D006648 ORTHO05D008253 2.7e-31 139.8 156 48.7
Psat7g000320 Pisum sativum HOM05D006648 ORTHO05D008253 2.7e-31 139.8 131 52.7
Carub.0001s1758 Capsella rubella HOM05D006648 ORTHO05D008253 4.6e-31 139.0 137 54.0
Phvul.002G333400 Phaseolus vulgaris HOM05D006648 ORTHO05D008253 4.6e-31 139.0 135 51.9
FvH4_5g18210 Fragaria vesca HOM05D006648 ORTHO05D008253 7.8e-31 138.3 138 52.2
FAN18G2423 Fragaria x ananassa HOM05D006648 ORTHO05D008253 7.8e-31 138.3 138 52.2
FAN04G2085 Fragaria x ananassa HOM05D006648 ORTHO05D008253 1.0e-30 137.9 138 52.2
VMungo0251G3035 Vigna mungo HOM05D006648 ORTHO05D008253 1.0e-30 137.9 135 51.1
FAN08G0531 Fragaria x ananassa HOM05D006648 ORTHO05D008253 1.3e-30 137.5 135 52.6
FAN13G0169 Fragaria x ananassa HOM05D006648 ORTHO05D008253 1.3e-30 137.5 135 52.6
RcHm_v2.0_Chr7g0177381 Rosa chinensis HOM05D006648 ORTHO05D008253 1.7e-30 137.1 135 53.3
LjContig00484g0018967 Lotus japonicus HOM05D006648 ORTHO05D008253 5.1e-30 135.6 131 51.9
Oeu034439.1 Olea europaea HOM05D006648 ORTHO05D008253 5.1e-30 135.6 78 84.6
C05p16230 Brassica napus HOM05D006648 ORTHO05D008253 6.6e-30 135.2 132 53.8
BolC5t30325H Brassica oleracea HOM05D006648 ORTHO05D008253 6.6e-30 135.2 132 53.8
PSO339G3414 Papaver somniferum HOM05D006648 ORTHO05D008253 6.6e-30 135.2 135 51.1
Aqoxy3G00019 Aquilegia oxysepala HOM05D006648 ORTHO05D008253 8.7e-30 134.8 129 54.3
AT1G17850 Arabidopsis thaliana HOM05D006648 ORTHO05D008253 1.1e-29 134.4 142 52.1
BraA06t24532Z Brassica rapa HOM05D006648 ORTHO05D008253 2.5e-29 133.3 132 52.3
PSO384G4308 Papaver somniferum HOM05D006648 ORTHO05D008253 2.5e-29 133.3 135 51.9
AL1G30210 Arabidopsis lyrata HOM05D006648 ORTHO05D008253 3.3e-29 132.9 142 51.4
CDE04G0242 Ceratophyllum demersum HOM05D006648 ORTHO05D008253 4.3e-29 132.5 131 51.1
Eucgr.H00617 Eucalyptus grandis HOM05D006648 ORTHO05D008253 4.3e-29 132.5 157 48.4
Gorai.004G017000 Gossypium raimondii HOM05D006648 ORTHO05D008253 7.3e-29 131.7 92 69.6
EL10Ac8g19442 Beta vulgaris HOM05D006648 ORTHO05D008253 1.2e-28 131.0 134 53.0
MD14G1244500 Malus domestica HOM05D006648 ORTHO05D008253 2.8e-28 129.8 133 52.6
GSVIVG01029375001 Vitis vinifera HOM05D006648 ORTHO05D008253 4.7e-28 129.0 71 83.1
Zm00001eb065310 Zea mays HOM05D006648 ORTHO05D008253 1.8e-27 127.1 129 50.4
HPP92_005076 Vanilla planifolia HOM05D006648 ORTHO05D008253 5.3e-27 125.6 133 50.4
Os03g0861700 Oryza sativa ssp. japonica HOM05D006648 ORTHO05D008253 6.9e-27 125.2 134 47.0
Nitab4.5_0000011g0060 Nicotiana tabacum HOM05D006648 ORTHO05D008253 1.2e-26 124.4 68 82.4
Pp3c17_19320 Physcomitrium patens HOM05D006648 ORTHO05D008253 9.9e-26 121.3 139 44.6
BcaB07g34009 Brassica carinata HOM05D006648 ORTHO05D008253 1.1e-24 117.9 70 80.0
Gohir.D03G050466 Gossypium hirsutum HOM05D006648 ORTHO05D008253 1.9e-24 117.1 84 67.9
Rhsim12G0136600 Rhododendron simsii HOM05D006648 ORTHO05D008253 1.2e-23 114.4 235 36.6
Mapoly0049s0044 Marchantia polymorpha HOM05D006648 ORTHO05D008253 4.6e-23 112.5 128 45.3
Glyma.05G248900 Glycine max HOM05D006648 ORTHO05D008253 3.6e-20 102.8 139 40.3
CBR_g4802 Chara braunii HOM05D006648 ORTHO05D008253 3.1e-19 99.8 131 40.5
AUR62042217 Chenopodium quinoa HOM05D006648 ORTHO05D008253 6.9e-19 98.6 162 38.3
Cpa.g.sc111.37 Carica papaya HOM05D006648 ORTHO05D008253 2.4e-16 90.1 53 79.2
Cre06.g304600 Chlamydomonas reinhardtii HOM05D006648 ORTHO05D008253 3.2e-16 89.7 138 35.5
Atru.chr9.364 Acer truncatum HOM05D006648 ORTHO05D008253 4.2e-16 89.4 50 84.0
Lj9C349G5 Lonicera japonica HOM05D006648 ORTHO05D008253 2.7e-15 86.7 95 49.5
CsaV3_3G041250 Cucumis sativus L. HOM05D006648 ORTHO05D008253 3.5e-15 86.3 50 80.0
AUR62033067 Chenopodium quinoa HOM05D006648 ORTHO05D008253 3.9e-14 82.8 52 71.2
ECA232G2150 Erigeron canadensis HOM05D006648 ORTHO05D008253 3.3e-13 79.7 49 73.5
MD06G1237700 Malus domestica HOM05D006648 ORTHO05D008253 3.1e-11 73.2 121 38.8
MCO07G583 Micromonas commoda HOM05D006648 ORTHO05D008253 1.5e-10 70.9 74 47.3
MBI03_g05121_MAGBIO Magnolia biondii HOM05D006648 ORTHO05D008253 1.7e-09 67.4 90 38.9
PRCOL_00002504 Prasinoderma coloniale HOM05D006648 ORTHO05D008253 8.4e-09 65.1 139 33.1


User provided reference genes

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