Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 1.3e-88 329.7 173 100.0
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 7.9e-57 224.2 172 68.0
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 2.3e-56 222.6 173 67.1
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 2.3e-56 222.6 173 67.1
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 5.7e-55 218.0 173 67.6
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 9.0e-45 184.1 175 57.7
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.6e-41 173.3 176 55.7
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 1.6e-41 173.3 173 53.8
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 1.6e-41 173.3 173 53.8
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 2.1e-41 172.9 175 55.4
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 2.1e-41 172.9 172 54.1
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.4e-40 170.2 176 54.5
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 1.4e-40 170.2 175 53.7
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 1.7e-38 163.3 173 50.3
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 2.8e-38 162.5 165 53.3
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 3.7e-38 162.2 173 52.6
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 4.8e-38 161.8 173 47.4
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 6.3e-38 161.4 173 49.1
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 1.4e-37 160.2 173 49.7
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 1.4e-37 160.2 173 49.1
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 1.4e-37 160.2 173 50.3
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 5.3e-37 158.3 175 51.4
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 6.9e-37 157.9 173 52.6
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 1.2e-36 157.1 173 48.0
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 1.5e-36 156.8 174 50.6
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 1.5e-36 156.8 173 52.6
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 3.4e-36 155.6 173 46.8
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 7.7e-36 154.5 173 50.3
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 1.0e-35 154.1 171 49.7
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 1.7e-35 153.3 173 52.0
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 1.4e-34 150.2 175 49.7
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 2.5e-34 149.4 175 48.0
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 2.5e-34 149.4 173 48.6
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 3.2e-34 149.1 173 47.4
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 3.2e-34 149.1 178 47.2
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 4.2e-34 148.7 171 46.8
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 5.5e-34 148.3 175 45.7
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 5.5e-34 148.3 165 47.3
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 2.1e-33 146.4 173 46.8
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 2.1e-33 146.4 175 46.3
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 2.7e-33 146.0 171 48.0
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 3.6e-33 145.6 174 47.1
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.0e-32 144.1 173 44.5
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 1.8e-32 143.3 173 49.7
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 3.0e-32 142.5 173 44.5
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 3.9e-32 142.1 175 46.3
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 1.5e-31 140.2 183 44.8
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 2.0e-31 139.8 173 43.4
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 1.7e-30 136.7 164 45.1
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 3.7e-30 135.6 164 44.5
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 1.8e-29 133.3 178 46.6
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 2.4e-29 132.9 173 40.5
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 5.3e-29 131.7 173 43.9
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 1.5e-28 130.2 173 42.2
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 4.5e-28 128.6 139 48.9
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 5.9e-28 128.3 145 48.3
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 6.5e-27 124.8 184 41.3
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 1.9e-26 123.2 172 40.7
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 4.2e-26 122.1 174 42.5
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 4.2e-26 122.1 158 46.2
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 7.2e-26 121.3 173 42.8
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 1.2e-25 120.6 173 42.2
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 1.2e-25 120.6 179 39.1
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 3.6e-25 119.0 168 44.0
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 4.7e-25 118.6 173 42.8
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 4.7e-25 118.6 174 44.8
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 6.1e-25 118.2 174 40.8
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 6.1e-25 118.2 181 38.1
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 6.1e-25 118.2 173 43.4
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 1.4e-24 117.1 174 39.7
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 2.3e-24 116.3 173 41.6
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 2.3e-24 116.3 181 37.0
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 3.0e-24 115.9 160 41.2
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 3.0e-24 115.9 174 40.8
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 3.0e-24 115.9 174 40.8
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 4.0e-24 115.5 181 41.4
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 8.8e-24 114.4 173 41.0
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.1e-23 114.0 173 41.0
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 1.1e-23 114.0 181 40.3
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 2.0e-23 113.2 181 40.3
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 4.4e-23 112.1 171 39.8
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 4.4e-23 112.1 181 39.2
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 5.7e-23 111.7 122 49.2
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 5.7e-23 111.7 183 39.3
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 5.7e-23 111.7 216 33.3
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 7.5e-23 111.3 171 40.4
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 7.5e-23 111.3 165 41.8
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 7.5e-23 111.3 171 40.4
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 7.5e-23 111.3 171 40.4
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 7.5e-23 111.3 165 41.8
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 2.8e-22 109.4 171 42.1
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 6.3e-22 108.2 125 46.4
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 8.2e-22 107.8 173 38.2
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.8e-21 106.7 180 37.8
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 4.1e-21 105.5 138 44.2
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 9.1e-21 104.4 126 42.1
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 1.2e-20 104.0 204 38.2
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 2.2e-19 99.8 181 38.7
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 1.1e-18 97.4 116 46.6
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 1.1e-18 97.4 116 44.8
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 2.5e-18 96.3 116 49.1
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 9.4e-18 94.4 119 43.7
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 4.7e-17 92.0 177 35.6
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 4.7e-17 92.0 165 35.2
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 6.8e-16 88.2 133 40.6
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 2.2e-14 83.2 173 32.4
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 1.6e-12 77.0 171 32.7
VMungo1127G0460 Vigna mungo HOM05D006478 ORTHO05D008071 1.0e-11 74.3 128 35.2
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 6.5e-11 71.6 96 40.6
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 3.2e-10 69.3 171 31.6
Lj1g0017005 Lotus japonicus HOM05D006478 ORTHO05D008071 5.5e-10 68.6 144 35.4
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 6.1e-09 65.1 52 61.5
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 4.0e-08 62.4 87 39.1
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 4.0e-08 62.4 106 39.6
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 6.8e-08 61.6 41 75.6
CBR_g39926 Chara braunii HOM05D006478 ORTHO05D008071 8.8e-08 61.2 185 30.3
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 4.4e-07 58.9 73 41.1
Nitab4.5_0001780g0030 Nicotiana tabacum HOM05D006478 ORTHO05D008071 4.4e-07 58.9 67 49.3


User provided reference genes

Program Settings