Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05490 Striga asiatica HOM05D002727 ORTHO05D002856 1.9e-84 315.8 162 100.0
SGA_v2.0_scaffold76G25158 Striga asiatica HOM05D002727 ORTHO05D002856 1.5e-17 93.6 61 82.0
SGA_v2.0_scaffold44G16740 Striga asiatica HOM05D002727 ORTHO05D002856 2.6e-17 92.8 63 79.4
SGA_v2.0_scaffold170G38831 Striga asiatica HOM05D002727 ORTHO05D002856 4.4e-17 92.0 79 72.2
SGA_v2.0_scaffold180G39653 Striga asiatica HOM05D000089 ORTHO05D000104 1.8e-15 86.7 62 79.0
SGA_v2.0_scaffold495G52461 Striga asiatica HOM05D002727 ORTHO05D002856 1.8e-15 86.7 64 75.0
SGA_v2.0_scaffold668G53415 Striga asiatica HOM05D002727 ORTHO05D002856 2.0e-14 83.2 55 83.6
Solyc05g008320.1 Solanum lycopersicum HOM05D002727 ORTHO05D002856 5.0e-13 78.6 64 67.2
Sopen05g004150 Solanum pennellii HOM05D002727 ORTHO05D002856 5.0e-13 78.6 64 67.2
PGSC0003DMG400030506 Solanum tuberosum HOM05D002727 ORTHO05D002856 5.0e-13 78.6 64 67.2
SGA_v2.0_scaffold122G33196 Striga asiatica HOM05D002727 ORTHO05D002856 5.0e-13 78.6 51 86.3
SGA_v2.0_scaffold52G19078 Striga asiatica HOM05D002727 ORTHO05D002856 8.5e-13 77.8 100 57.0
CAN.G185.21 Capsicum annuum HOM05D002727 ORTHO05D002856 4.2e-12 75.5 64 64.1
Nitab4.5_0006134g0020 Nicotiana tabacum HOM05D002727 ORTHO05D002856 2.1e-11 73.2 72 62.5
Migut.E00413 Erythranthe guttata HOM05D002727 ORTHO05D002856 6.1e-11 71.6 80 57.5
Oeu044348.1 Olea europaea HOM05D002727 ORTHO05D002856 1.8e-10 70.1 66 57.6
SGA_v2.0_scaffold190G40405 Striga asiatica HOM05D002727 ORTHO05D002856 5.2e-10 68.6 44 88.6
Peaxi162Scf00205g00023 Petunia axillaris HOM05D002727 ORTHO05D002856 6.8e-10 68.2 66 57.6
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 1.5e-09 67.0 40 90.0
unitig_27.g25263 Utricularia gibba HOM05D002727 ORTHO05D002856 6.3e-08 61.6 63 54.0
HanXRQChr08g0212641 Helianthus annuus HOM05D002727 ORTHO05D002856 1.4e-07 60.5 64 53.1
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 7.0e-07 58.2 64 50.0
Lsat_1_v5_gn_8_43200 Lactuca sativa HOM05D002727 ORTHO05D002856 9.2e-07 57.8 64 48.4
SGA_v2.0_scaffold172G38950 Striga asiatica HOM05D002727 ORTHO05D002856 2.7e-06 56.2 35 85.7
Hma1.2p1_0114F.1_g055280 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 4.5e-06 55.5 64 54.7


User provided reference genes

Program Settings