Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05387 Striga asiatica HOM05D002262 ORTHO05D000137 5.4e-306 1053.5 533 100.0
SGA_v2.0_scaffold2471G54126 Striga asiatica HOM05D000679 ORTHO05D000137 5.7e-21 106.7 317 27.4
SGA_v2.0_scaffold11G05593 Striga asiatica HOM05D002262 ORTHO05D000482 9.0e-19 99.4 115 47.0
SGA_v2.0_scaffold160G37744 Striga asiatica HOM05D002262 ORTHO05D000137 4.5e-18 97.1 281 26.7
SGA_v2.0_scaffold437G51617 Striga asiatica HOM05D000679 ORTHO05D000137 2.2e-17 94.7 390 24.1
SGA_v2.0_scaffold219G42531 Striga asiatica HOM05D002262 ORTHO05D000482 1.8e-14 85.1 302 26.5
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 2.5e-13 81.3 129 34.9
SGA_v2.0_scaffold126G33830 Striga asiatica HOM05D000679 ORTHO05D000137 3.3e-13 80.9 128 37.5
Nitab4.5_0000665g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.4e-13 79.7 197 29.9
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 7.4e-13 79.7 128 36.7
SGA_v2.0_scaffold178G39480 Striga asiatica HOM05D002262 ORTHO05D000137 4.8e-12 77.0 115 38.3
SGA_v2.0_scaffold59G20643 Striga asiatica HOM05D000679 ORTHO05D000137 8.2e-12 76.3 115 38.3
SGA_v2.0_scaffold1G00046 Striga asiatica HOM05D000679 ORTHO05D000137 1.8e-11 75.1 315 26.3
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 1.3e-09 68.9 78 47.4
SGA_v2.0_scaffold2G01282 Striga asiatica HOM05D000679 ORTHO05D000137 1.3e-09 68.9 76 44.7
Nitab4.5_0000514g0180 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.9e-09 67.8 74 43.2
Nitab4.5_0000832g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.8e-09 67.4 148 32.4
Nitab4.5_0002432g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.8e-09 67.4 119 33.6
Nitab4.5_0008561g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.8e-09 67.4 104 35.6
CANSAT11G1859 Cannabis sativa HOM05D008721 ORTHO05D000137 5.0e-09 67.0 78 46.2
CANSAT21G0642 Cannabis sativa HOM05D008721 ORTHO05D000137 5.0e-09 67.0 78 46.2
CANSAT21G2500 Cannabis sativa HOM05D008721 ORTHO05D000137 5.0e-09 67.0 78 46.2
CANSAT54G1268 Cannabis sativa HOM05D008897 ORTHO05D000137 8.5e-09 66.2 125 31.2
CANSAT78G1843 Cannabis sativa HOM05D008721 ORTHO05D000137 8.5e-09 66.2 78 46.2
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 8.5e-09 66.2 78 46.2
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 1.1e-08 65.9 78 46.2
CANSAT35G0046 Cannabis sativa HOM05D000679 ORTHO05D000137 1.1e-08 65.9 78 46.2
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-08 65.9 109 36.7
CANSAT35G1242 Cannabis sativa HOM05D000679 ORTHO05D000137 1.4e-08 65.5 95 40.0
CANSAT54G2098 Cannabis sativa HOM05D000679 ORTHO05D000137 1.4e-08 65.5 90 42.2
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.4e-08 65.5 137 32.8
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 1.9e-08 65.1 73 46.6
CANSAT25G1221 Cannabis sativa HOM05D008636 ORTHO05D000137 2.5e-08 64.7 71 47.9
Nitab4.5_0000026g0260 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.2e-08 64.3 137 32.1
Nitab4.5_0001707g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.2e-08 64.3 237 24.9
Nitab4.5_0017747g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.2e-08 64.3 291 23.4
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 4.2e-08 63.9 71 47.9
CANSAT01G0402 Cannabis sativa HOM05D008636 ORTHO05D000137 4.2e-08 63.9 71 47.9
CANSAT25G0186 Cannabis sativa HOM05D008636 ORTHO05D000137 4.2e-08 63.9 71 47.9
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 4.2e-08 63.9 78 44.9
CANSAT25G3447 Cannabis sativa HOM05D008636 ORTHO05D000137 4.2e-08 63.9 71 47.9
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 4.2e-08 63.9 71 47.9
CANSAT56G1525 Cannabis sativa HOM05D008636 ORTHO05D000137 4.2e-08 63.9 71 47.9
CANSAT54G1761 Cannabis sativa HOM05D008721 ORTHO05D000137 5.5e-08 63.5 66 48.5
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.5e-08 63.5 135 32.6
Sopen07g017260 Solanum pennellii HOM05D000679 ORTHO05D000137 5.5e-08 63.5 183 31.1
CANSAT11G1718 Cannabis sativa HOM05D009472 ORTHO05D000137 7.2e-08 63.2 87 42.5
CANSAT25G0378 Cannabis sativa HOM05D000679 ORTHO05D000137 7.2e-08 63.2 90 40.0
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 2.1e-07 61.6 68 50.0
CANSAT78G0758 Cannabis sativa HOM05D008721 ORTHO05D000137 2.1e-07 61.6 115 31.3
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.1e-07 61.6 77 39.0
Nitab4.5_0002329g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.7e-07 61.2 116 37.9
CANSAT78G2225 Cannabis sativa HOM05D009472 ORTHO05D000137 3.6e-07 60.8 84 41.7
CAN.G1524.9 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-07 60.8 69 46.4
Nitab4.5_0001614g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.6e-07 60.5 109 34.9
Nitab4.5_0011275g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.6e-07 60.5 75 40.0
CANSAT25G1234 Cannabis sativa HOM05D023333 ORTHO05D000137 6.1e-07 60.1 84 40.5
CANSAT78G0118 Cannabis sativa HOM05D009472 ORTHO05D000137 7.9e-07 59.7 89 39.3
Nitab4.5_0004940g0100 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.9e-07 59.7 90 38.9
Peaxi162Scf01147g00017 Petunia axillaris HOM05D010453 ORTHO05D000137 7.9e-07 59.7 88 37.5
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.0e-06 59.3 133 31.6
PGSC0003DMG400009651 Solanum tuberosum HOM05D002262 ORTHO05D000482 1.0e-06 59.3 118 33.1
SGA_v2.0_scaffold2356G54104 Striga asiatica HOM05D000679 ORTHO05D000137 1.4e-06 58.9 91 34.1
SGA_v2.0_scaffold306G48010 Striga asiatica HOM05D000679 ORTHO05D000137 1.4e-06 58.9 75 38.7
CAN.G1469.2 Capsicum annuum HOM05D002262 ORTHO05D000137 1.8e-06 58.5 109 33.0
Nitab4.5_0001299g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-06 58.5 62 46.8
Nitab4.5_0003465g0040 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.8e-06 58.5 146 28.8
Peaxi162Scf00048g01514 Petunia axillaris HOM05D010453 ORTHO05D012004 1.8e-06 58.5 143 31.5
Oeu032768.1 Olea europaea HOM05D011057 ORTHO05D013047 3.0e-06 57.8 213 24.4
CANSAT25G1319 Cannabis sativa HOM05D000679 ORTHO05D000137 3.9e-06 57.4 84 40.5
Nitab4.5_0003021g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.9e-06 57.4 63 42.9
Nitab4.5_0005382g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.9e-06 57.4 75 38.7
CAN.G1164.36 Capsicum annuum HOM05D000541 ORTHO05D000137 5.1e-06 57.0 83 39.8
Sopen07g014800 Solanum pennellii HOM05D000541 ORTHO05D000137 5.1e-06 57.0 176 27.8
CANSAT11G0393 Cannabis sativa HOM05D008721 ORTHO05D000137 6.7e-06 56.6 56 50.0
Nitab4.5_0003770g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.7e-06 56.6 90 40.0
Peaxi162Scf00237g00177 Petunia axillaris HOM05D000679 ORTHO05D000137 6.7e-06 56.6 63 41.3
Nitab4.5_0000255g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.8e-06 56.2 84 38.1
Nitab4.5_0000864g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.8e-06 56.2 68 38.2


User provided reference genes

Program Settings