Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05341 Striga asiatica HOM05D026728 ORTHO05D004092 1.5e-162 576.2 321 100.0
SGA_v2.0_scaffold113G31729 Striga asiatica HOM05D026728 ORTHO05D004092 1.0e-25 121.7 263 38.0
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 2.0e-21 107.5 309 35.0
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 2.8e-15 87.0 163 36.2
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 2.8e-15 87.0 268 32.8
SalBow4G1418 Salvia bowleyana HOM05D026728 ORTHO05D004092 3.6e-15 86.7 391 26.3
SalBow4G1950 Salvia bowleyana HOM05D026728 ORTHO05D004092 3.6e-15 86.7 403 26.3
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 1.4e-14 84.7 163 35.6
PGR042G0303 Punica granatum HOM05D004189 ORTHO05D004092 2.0e-13 80.9 297 34.7
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 9.9e-13 78.6 289 30.1
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 6.4e-12 75.9 365 30.4
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 4.6e-10 69.7 272 28.7
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 6.0e-10 69.3 167 31.7
Nitab4.5_0002721g0060 Nicotiana tabacum HOM05D004189 ORTHO05D004092 7.9e-10 68.9 192 28.6
CSS0007027 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 1.0e-09 68.6 149 35.6
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 1.3e-09 68.2 306 35.0
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 5.1e-09 66.2 219 41.1
ClCG09G012920 Citrullus lanatus HOM05D004189 ORTHO05D004092 6.7e-09 65.9 275 35.3
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 6.7e-09 65.9 158 32.3
CSS0002108 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 8.7e-09 65.5 161 34.2
BcaC01g06182 Brassica carinata HOM05D004189 ORTHO05D004092 1.1e-08 65.1 87 42.5
SGA_v2.0_scaffold60G21043 Striga asiatica HOM05D004189 ORTHO05D004092 1.1e-08 65.1 73 50.7
Nitab4.5_0003242g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.9e-08 64.3 184 28.8
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 1.9e-08 64.3 236 32.6
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 3.3e-08 63.5 183 27.3
BcaB01g04200 Brassica carinata HOM05D004189 ORTHO05D004092 5.6e-08 62.8 76 46.1
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 5.6e-08 62.8 104 36.5
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 5.6e-08 62.8 173 30.1
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 7.4e-08 62.4 161 33.5
ATR0680G076 Amborella trichopoda HOM05D004189 ORTHO05D004092 9.6e-08 62.0 182 25.8
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 9.6e-08 62.0 81 43.2
C03p18370 Brassica napus HOM05D004189 ORTHO05D004092 1.3e-07 61.6 88 43.2
BolC3t14234H Brassica oleracea HOM05D004189 ORTHO05D004092 1.3e-07 61.6 88 43.2
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 1.3e-07 61.6 107 36.4
Lj2g0010006 Lotus japonicus HOM05D004189 ORTHO05D004092 1.6e-07 61.2 256 30.5
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.6e-07 61.2 73 47.9
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 1.6e-07 61.2 121 32.2
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 2.1e-07 60.8 318 29.6
A03p15730 Brassica napus HOM05D004189 ORTHO05D004092 2.8e-07 60.5 88 43.2
BraA03t10863Z Brassica rapa HOM05D004189 ORTHO05D004092 2.8e-07 60.5 88 43.2
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 2.8e-07 60.5 65 43.1
CAN.G166.11 Capsicum annuum HOM05D004189 ORTHO05D004092 6.2e-07 59.3 193 27.5
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 6.2e-07 59.3 235 26.4
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 6.2e-07 59.3 61 47.5
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 6.2e-07 59.3 70 48.6
Psat0s2227g0040 Pisum sativum HOM05D004189 ORTHO05D004092 8.1e-07 58.9 136 33.8
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 8.1e-07 58.9 59 49.2
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 1.8e-06 57.8 59 49.2
Dinv28441 Davidia involucrata HOM05D004189 ORTHO05D004092 2.4e-06 57.4 374 27.5
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.4e-06 57.4 137 32.8
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 2.4e-06 57.4 274 29.9
Phvul.004G117100 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 2.4e-06 57.4 230 27.0
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 2.4e-06 57.4 59 49.2
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.1e-06 57.0 137 31.4
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 3.1e-06 57.0 279 30.5
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 5.3e-06 56.2 122 32.0
Medtr6g045273 Medicago truncatula HOM05D004189 ORTHO05D004092 5.3e-06 56.2 118 30.5
CDE08G1026 Ceratophyllum demersum HOM05D004189 ORTHO05D004092 6.9e-06 55.8 227 26.9
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 6.9e-06 55.8 202 34.7
Solyc01g009660.3 Solanum lycopersicum HOM05D004189 ORTHO05D004092 6.9e-06 55.8 172 29.7
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 9.0e-06 55.5 355 27.9
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 9.0e-06 55.5 272 25.7
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 9.0e-06 55.5 68 42.6


User provided reference genes

Program Settings