Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05320 Striga asiatica HOM05D007680 ORTHO05D009702 2.0e-58 228.8 108 100.0
Migut.F01656 Erythranthe guttata HOM05D007680 ORTHO05D009702 1.7e-20 102.8 115 51.3
Oeu060261.1 Olea europaea HOM05D007680 ORTHO05D009702 3.2e-16 88.6 122 45.9
SalBow6G1777 Salvia bowleyana HOM05D007680 ORTHO05D009702 7.2e-16 87.4 115 47.8
SGA_v2.0_scaffold154G37188 Striga asiatica HOM05D004374 ORTHO05D005430 9.4e-16 87.0 80 56.2
Dinv30655 Davidia involucrata HOM05D007680 ORTHO05D009702 1.5e-13 79.7 123 48.0
Hma1.2p1_0026F.1_g016760 Hydrangea macrophylla HOM05D007680 ORTHO05D009702 2.6e-13 79.0 130 40.0
Hund17353 Selenicereus undatus HOM05D007680 ORTHO05D009702 7.4e-13 77.4 43 74.4
Manes.05G202400 Manihot esculenta HOM05D007680 ORTHO05D009702 3.7e-12 75.1 116 40.5
Lsat_1_v5_gn_2_102521 Lactuca sativa HOM05D007680 ORTHO05D009702 4.8e-12 74.7 73 47.9
Sopen11g003400 Solanum pennellii HOM05D007680 ORTHO05D009702 6.3e-12 74.3 108 43.5
CSS0013494 Camellia sinensis var. sinensis HOM05D007680 ORTHO05D009702 8.2e-12 73.9 43 74.4
Lj2C27T21 Lonicera japonica HOM05D007680 ORTHO05D009702 8.2e-12 73.9 44 77.3
unitig_899.g15034 Utricularia gibba HOM05D007680 ORTHO05D009702 8.2e-12 73.9 101 47.5
PGSC0003DMG400027341 Solanum tuberosum HOM05D007680 ORTHO05D009702 1.1e-11 73.6 112 42.9
vmacro10277 Vaccinium macrocarpon HOM05D007680 ORTHO05D009702 1.1e-11 73.6 37 86.5
MELO3C012366.2 Cucumis melo HOM05D007680 ORTHO05D009702 1.4e-11 73.2 131 38.2
Prupe.2G086600 Prunus persica HOM05D007680 ORTHO05D009702 4.1e-11 71.6 49 67.3
Actinidia31090 Actinidia chinensis HOM05D007680 ORTHO05D009702 5.3e-11 71.2 37 83.8
MBI17_g11658_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 7.0e-11 70.9 61 54.1
AUR62043943 Chenopodium quinoa HOM05D000002 ORTHO05D000001 9.1e-11 70.5 89 46.1
EL10Ac2g03857 Beta vulgaris HOM05D007680 ORTHO05D009702 1.6e-10 69.7 86 43.0
TAR636G0370 Trochodendron aralioides HOM05D007680 ORTHO05D009702 1.6e-10 69.7 115 41.7
QL04p041248 Quercus lobata HOM05D007680 ORTHO05D009702 4.5e-10 68.2 46 67.4
CsaV3_5G035650 Cucumis sativus L. HOM05D007680 ORTHO05D009702 5.9e-10 67.8 46 65.2
FAN03G2755 Fragaria x ananassa HOM05D007680 ORTHO05D009702 7.7e-10 67.4 49 65.3
FAN06G0858 Fragaria x ananassa HOM05D007680 ORTHO05D009702 7.7e-10 67.4 49 65.3
ClCG05G021580 Citrullus lanatus HOM05D007680 ORTHO05D009702 1.3e-09 66.6 46 63.0
DCAR_006372 Daucus carota HOM05D007680 ORTHO05D009702 1.3e-09 66.6 106 42.5
Sed0005690 Sechium edule HOM05D007680 ORTHO05D009702 1.3e-09 66.6 48 56.2
GSVIVG01034708001 Vitis vinifera HOM05D007680 ORTHO05D009702 1.3e-09 66.6 112 42.0
Gorai.009G304500 Gossypium raimondii HOM05D007680 ORTHO05D009702 3.8e-09 65.1 87 43.7
HanXRQChr08g0217901 Helianthus annuus HOM05D007680 ORTHO05D009702 3.8e-09 65.1 35 74.3
Sabra10G0182100 Salix brachista HOM05D007680 ORTHO05D009702 1.5e-08 63.2 43 60.5
ATR0820G188 Amborella trichopoda HOM05D007680 ORTHO05D009702 1.9e-08 62.8 46 69.6
Gohir.A05G288200 Gossypium hirsutum HOM05D007680 ORTHO05D009702 1.9e-08 62.8 86 43.0
Gohir.D05G289400 Gossypium hirsutum HOM05D007680 ORTHO05D009702 1.9e-08 62.8 87 42.5
PGR044G0006 Punica granatum HOM05D007680 ORTHO05D009702 2.5e-08 62.4 62 61.3
MD07G1069500 Malus domestica HOM05D007680 ORTHO05D009702 3.2e-08 62.0 46 58.7
MD07G1087200 Malus domestica HOM05D007680 ORTHO05D009702 4.2e-08 61.6 39 71.8
Nn2g14013 Nelumbo nucifera HOM05D007680 ORTHO05D009702 4.2e-08 61.6 123 39.0
Sc20g0001300 Simmondsia chinensis HOM05D007680 ORTHO05D009702 7.2e-08 60.8 32 78.1
Aqoxy2G01382 Aquilegia oxysepala HOM05D007680 ORTHO05D009702 9.4e-08 60.5 100 37.0
Potri.008G025700 Populus trichocarpa HOM05D007680 ORTHO05D009702 9.4e-08 60.5 34 70.6
Ah.10g034230 Amaranthus hybridus HOM05D007680 ORTHO05D009702 1.2e-07 60.1 46 54.3
RcHm_v2.0_Chr1g0333251 Rosa chinensis HOM05D007680 ORTHO05D009702 1.6e-07 59.7 31 77.4
Potri.010G234900 Populus trichocarpa HOM05D007680 ORTHO05D009702 2.1e-07 59.3 42 59.5
Duzib128G1419 Durio zibethinus HOM05D007680 ORTHO05D009702 2.7e-07 58.9 105 38.1
Psat6g094320 Pisum sativum HOM05D007680 ORTHO05D009702 4.7e-07 58.2 38 68.4
Sp7g35810 Schrenkiella parvula HOM05D007680 ORTHO05D009702 4.7e-07 58.2 87 36.8
Ciclev10032885m.g Citrus clementina HOM05D007680 ORTHO05D009702 6.1e-07 57.8 47 66.0
TAR636G3254 Trochodendron aralioides HOM05D007680 ORTHO05D009702 6.1e-07 57.8 52 55.8
Atru.chr12.970 Acer truncatum HOM05D007680 ORTHO05D009702 1.8e-06 56.2 50 54.0
CiPaw.14G028600 Carya illinoinensis HOM05D007680 ORTHO05D009702 1.8e-06 56.2 48 52.1
THA.LOC104824894 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 1.8e-06 56.2 56 51.8
THA.LOC104824900 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 1.8e-06 56.2 56 51.8
Phvul.007G245300 Phaseolus vulgaris HOM05D007680 ORTHO05D009702 2.3e-06 55.8 34 73.5
Haze_02610 Corylus avellana HOM05D007680 ORTHO05D009702 3.0e-06 55.5 43 53.5
Thecc.10G109800 Theobroma cacao HOM05D007680 ORTHO05D009702 3.0e-06 55.5 47 66.0
Thecc.K0008600 Theobroma cacao HOM05D007680 ORTHO05D009702 3.0e-06 55.5 47 66.0
Glyma.02G165700 Glycine max HOM05D007680 ORTHO05D009702 4.0e-06 55.1 35 68.6
TAR636G2061 Trochodendron aralioides HOM05D007680 ORTHO05D009702 4.0e-06 55.1 99 39.4
VMungo0720G1600 Vigna mungo HOM05D007680 ORTHO05D009702 5.2e-06 54.7 44 59.1
Lj6g0009049 Lotus japonicus HOM05D007680 ORTHO05D009702 6.7e-06 54.3 104 41.3
TPR.G305 Trifolium pratense HOM05D007680 ORTHO05D009702 6.7e-06 54.3 30 80.0
TPR.G7612 Trifolium pratense HOM05D007680 ORTHO05D009702 6.7e-06 54.3 30 80.0
Lalb_Chr01g0010321 Lupinus albus HOM05D007680 ORTHO05D009702 8.8e-06 53.9 35 68.6


User provided reference genes

Program Settings