Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 2.5e-130 468.8 235 100.0
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 2.2e-65 253.1 249 57.4
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 7.2e-61 238.0 235 59.1
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 7.2e-61 238.0 235 59.1
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.4e-53 213.8 249 50.6
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 5.9e-47 191.8 236 50.4
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 1.2e-36 157.5 249 42.6
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 3.6e-36 156.0 255 42.0
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 2.2e-33 146.7 257 42.0
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 1.4e-32 144.1 252 40.5
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 5.4e-32 142.1 262 41.2
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.0e-31 140.2 259 37.8
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 3.5e-31 139.4 258 39.5
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 8.5e-30 134.8 250 39.2
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 8.5e-30 134.8 251 39.4
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 1.1e-29 134.4 268 34.7
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.9e-29 133.7 259 36.7
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 3.2e-29 132.9 258 38.4
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 5.5e-29 132.1 244 39.3
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.4e-27 127.5 262 36.6
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 5.2e-27 125.6 254 40.2
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 5.2e-27 125.6 185 45.4
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 8.8e-27 124.8 260 37.3
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 1.2e-26 124.4 269 33.1
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 1.2e-26 124.4 210 41.9
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 9.8e-26 121.3 223 42.2
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 2.4e-24 116.7 255 35.7
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 3.1e-24 116.3 259 37.1
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 4.1e-24 115.9 255 33.3
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.2e-23 114.4 222 39.6
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.7e-23 113.2 252 34.5
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 4.5e-23 112.5 254 34.3
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 1.0e-22 111.3 220 39.1
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 2.3e-22 110.2 194 41.8
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.8e-22 109.4 250 34.0
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 2.5e-21 106.7 248 34.7
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.5e-21 106.7 215 38.6
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 4.3e-21 105.9 261 35.2
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 5.6e-21 105.5 248 34.3
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 5.6e-21 105.5 293 32.4
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 7.3e-21 105.1 235 33.2
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 9.5e-21 104.8 184 39.1
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 9.5e-21 104.8 270 31.9
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.2e-20 104.4 252 32.9
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 6.1e-20 102.1 259 33.6
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 1.0e-19 101.3 260 34.6
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 2.3e-19 100.1 252 33.3
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 4.0e-19 99.4 218 36.2
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 8.9e-19 98.2 229 33.2
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 8.9e-19 98.2 265 32.5
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 8.9e-19 98.2 264 30.3
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.2e-18 97.8 215 34.0
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 1.5e-18 97.4 236 33.5
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.5e-18 97.4 167 41.3
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 2.0e-18 97.1 259 33.2
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 3.4e-18 96.3 265 33.2
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 3.4e-18 96.3 224 35.3
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 4.4e-18 95.9 259 33.2
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 7.5e-18 95.1 169 43.2
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 3.7e-17 92.8 245 33.5
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 4.9e-17 92.4 231 32.0
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 6.4e-17 92.0 154 42.2
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 6.4e-17 92.0 255 31.8
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 1.1e-16 91.3 265 32.5
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 1.4e-16 90.9 244 32.4
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 3.2e-16 89.7 244 32.4
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 4.1e-16 89.4 237 31.6
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 7.0e-16 88.6 233 32.6
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 7.0e-16 88.6 242 33.5
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 9.2e-16 88.2 256 31.6
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 9.2e-16 88.2 238 34.0
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.2e-15 87.8 207 34.3
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 1.6e-15 87.4 242 34.3
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.0e-15 87.0 256 31.6
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 3.5e-15 86.3 255 32.5
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 1.7e-14 84.0 259 31.7
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 6.6e-14 82.0 255 32.2
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 8.6e-14 81.6 254 31.5
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 1.1e-13 81.3 274 32.8
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 1.5e-13 80.9 242 30.6
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 1.9e-13 80.5 265 34.0
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 4.3e-13 79.3 262 29.4
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.2e-12 77.8 118 40.7
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 2.1e-12 77.0 243 32.1
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.1e-12 77.0 243 32.1
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 2.1e-12 77.0 216 30.6
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 4.7e-12 75.9 242 31.4
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 8.0e-12 75.1 269 30.9
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 1.8e-11 73.9 209 32.5
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 3.1e-11 73.2 237 29.5
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 4.0e-11 72.8 237 31.2
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 1.5e-10 70.9 238 30.7
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.0e-10 70.5 238 30.7
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 2.0e-10 70.5 219 31.5
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.4e-10 69.7 238 30.3
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 9.8e-10 68.2 213 28.2
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 9.8e-10 68.2 222 28.8
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.3e-09 67.8 238 30.3
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.7e-09 67.4 109 39.4
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 2.9e-09 66.6 239 28.0
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 2.9e-09 66.6 240 30.0
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 3.7e-09 66.2 181 30.9
PGSC0003DMG400017033 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.4e-08 64.3 111 45.9
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 2.4e-08 63.5 239 27.6
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 5.4e-08 62.4 167 32.3
Sopen06g011990 Solanum pennellii HOM05D006494 ORTHO05D007787 5.4e-08 62.4 147 32.7
AUR62021137 Chenopodium quinoa HOM05D014004 ORTHO05D015823 6.0e-07 58.9 200 29.5
Hund04846 Selenicereus undatus HOM05D014004 ORTHO05D015823 3.9e-06 56.2 215 25.6
AUR62031402 Chenopodium quinoa HOM05D014004 ORTHO05D015823 5.0e-06 55.8 169 28.4
AUR62034081 Chenopodium quinoa HOM05D014004 ORTHO05D015823 5.0e-06 55.8 169 29.0
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 6.6e-06 55.5 226 27.4


User provided reference genes

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