Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05280 Striga asiatica HOM05D004003 ORTHO05D004595 6.1e-97 357.5 178 100.0
Migut.F01081 Erythranthe guttata HOM05D004003 ORTHO05D004595 1.1e-85 320.1 179 88.8
MSTRG.8697 Avicennia marina HOM05D004003 ORTHO05D004595 1.9e-85 319.3 179 88.3
Cc02_g02230 Coffea canephora HOM05D004003 ORTHO05D004595 1.7e-83 312.8 179 87.2
Oeu061668.1 Olea europaea HOM05D004003 ORTHO05D004595 7.3e-82 307.4 179 86.0
Oeu003331.1 Olea europaea HOM05D004003 ORTHO05D004595 8.1e-81 303.9 178 83.7
SalBow2G3526 Salvia bowleyana HOM05D004003 ORTHO05D004595 6.8e-80 300.8 179 82.1
Nitab4.5_0011314g0010 Nicotiana tabacum HOM05D004003 ORTHO05D004595 1.2e-79 300.1 179 85.5
Peaxi162Scf00444g00034 Petunia axillaris HOM05D004003 ORTHO05D004595 1.5e-79 299.7 179 83.2
unitig_0.g1158 Utricularia gibba HOM05D004003 ORTHO05D004595 9.9e-79 297.0 165 86.7
Nitab4.5_0000472g0260 Nicotiana tabacum HOM05D004003 ORTHO05D004595 4.9e-78 294.7 156 91.7
CAN.G126.15 Capsicum annuum HOM05D004003 ORTHO05D004595 8.3e-78 293.9 179 84.9
Sopen03g003590 Solanum pennellii HOM05D004003 ORTHO05D004595 8.3e-78 293.9 179 84.9
Solyc03g007660.4 Solanum lycopersicum HOM05D004003 ORTHO05D004595 1.9e-77 292.7 179 84.4
Sopen06g012130 Solanum pennellii HOM05D004003 ORTHO05D004595 9.2e-77 290.4 179 83.2
Hma1.2p1_1713F.1_g298900 Hydrangea macrophylla HOM05D004003 ORTHO05D004595 1.6e-76 289.7 171 84.2
DCAR_010652 Daucus carota HOM05D004003 ORTHO05D004595 2.7e-76 288.9 170 83.5
Solyc06g036350.3 Solanum lycopersicum HOM05D004003 ORTHO05D004595 3.5e-76 288.5 179 82.7
PGSC0003DMG400028905 Solanum tuberosum HOM05D004003 ORTHO05D004595 1.7e-75 286.2 171 84.2
CSS0000705 Camellia sinensis var. sinensis HOM05D004003 ORTHO05D004595 5.1e-75 284.6 171 83.0
Actinidia31844 Actinidia chinensis HOM05D004003 ORTHO05D004595 5.6e-74 281.2 168 82.1
DCAR_020275 Daucus carota HOM05D004003 ORTHO05D004595 7.3e-74 280.8 155 88.4
Lsat_1_v5_gn_9_56860 Lactuca sativa HOM05D004003 ORTHO05D004595 7.3e-74 280.8 172 80.2
Lalb_Chr19g0130491 Lupinus albus HOM05D004003 ORTHO05D004595 9.5e-74 280.4 166 83.1
Rhsim03G0192400 Rhododendron simsii HOM05D004003 ORTHO05D004595 1.6e-73 279.6 171 82.5
Lj1A1007T57 Lonicera japonica HOM05D004003 ORTHO05D004595 2.1e-73 279.3 176 77.8
Lj1A1007T58 Lonicera japonica HOM05D004003 ORTHO05D004595 2.1e-73 279.3 176 77.8
Hund13071 Selenicereus undatus HOM05D004003 ORTHO05D004595 2.1e-73 279.3 168 82.7
Actinidia03142 Actinidia chinensis HOM05D004003 ORTHO05D004595 2.8e-73 278.9 174 78.7
EL10Ac2g03211 Beta vulgaris HOM05D004003 ORTHO05D004595 4.7e-73 278.1 151 88.7
CsaV3_3G017590 Cucumis sativus L. HOM05D004003 ORTHO05D004595 6.2e-73 277.7 174 79.9
Actinidia08590 Actinidia chinensis HOM05D004003 ORTHO05D004595 8.1e-73 277.3 175 79.4
Dinv35269 Davidia involucrata HOM05D004003 ORTHO05D004595 1.1e-72 276.9 161 85.1
Sed0014667 Sechium edule HOM05D004003 ORTHO05D004595 1.1e-72 276.9 168 82.1
Lsat_1_v5_gn_2_131500 Lactuca sativa HOM05D004003 ORTHO05D004595 1.8e-72 276.2 166 83.1
MELO3C006949.2 Cucumis melo HOM05D004003 ORTHO05D004595 2.3e-72 275.8 165 83.0
COL.COLO4_30289 Corchorus olitorius HOM05D004003 ORTHO05D004595 3.1e-72 275.4 179 79.3
Duzib084G0289 Durio zibethinus HOM05D004003 ORTHO05D004595 3.1e-72 275.4 151 88.7
HanXRQChr15g0494181 Helianthus annuus HOM05D004003 ORTHO05D004595 3.1e-72 275.4 173 79.2
Sc14g0006860 Simmondsia chinensis HOM05D004003 ORTHO05D004595 3.1e-72 275.4 171 80.1
ClCG05G008500 Citrullus lanatus HOM05D004003 ORTHO05D004595 4.0e-72 275.0 165 83.0
Ah.11g045360 Amaranthus hybridus HOM05D004003 ORTHO05D004595 5.2e-72 274.6 157 84.1
Gohir.D11G013100 Gossypium hirsutum HOM05D004003 ORTHO05D004595 6.8e-72 274.2 151 88.1
ECA232G1033 Erigeron canadensis HOM05D004003 ORTHO05D004595 8.9e-72 273.9 173 77.5
Sed0009881 Sechium edule HOM05D004003 ORTHO05D004595 8.9e-72 273.9 166 81.3
Duzib205G1856 Durio zibethinus HOM05D004003 ORTHO05D004595 1.2e-71 273.5 151 88.1
GSVIVG01028820001 Vitis vinifera HOM05D004003 ORTHO05D004595 1.2e-71 273.5 170 80.6
Rhsim09G0201100 Rhododendron simsii HOM05D004003 ORTHO05D004595 1.5e-71 273.1 171 78.4
Eucgr.A02717 Eucalyptus grandis HOM05D004003 ORTHO05D004595 3.4e-71 271.9 177 77.4
Lalb_Chr03g0034981 Lupinus albus HOM05D004003 ORTHO05D004595 3.4e-71 271.9 168 81.5
Aqoxy7G00202 Aquilegia oxysepala HOM05D004003 ORTHO05D004595 4.4e-71 271.6 176 79.0
Gohir.A11G012800 Gossypium hirsutum HOM05D004003 ORTHO05D004595 4.4e-71 271.6 151 86.8
THA.LOC104800278 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 5.8e-71 271.2 166 81.3
THA.LOC104825117 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 5.8e-71 271.2 169 81.1
Manes.14G021000 Manihot esculenta HOM05D004003 ORTHO05D004595 9.9e-71 270.4 166 80.1
Thecc.03G186200 Theobroma cacao HOM05D004003 ORTHO05D004595 9.9e-71 270.4 176 79.5
Thhalv10026409m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 1.3e-70 270.0 171 79.5
Gorai.007G013400 Gossypium raimondii HOM05D004003 ORTHO05D004595 1.7e-70 269.6 153 86.9
Manes.06G153700 Manihot esculenta HOM05D004003 ORTHO05D004595 1.7e-70 269.6 166 80.7
Gorai.008G273600 Gossypium raimondii HOM05D004003 ORTHO05D004595 2.2e-70 269.2 176 77.8
Lj2g0001989 Lotus japonicus HOM05D004003 ORTHO05D004595 2.2e-70 269.2 171 79.5
CiPaw.06G004300 Carya illinoinensis HOM05D004003 ORTHO05D004595 2.9e-70 268.9 171 79.5
QL09p012375 Quercus lobata HOM05D004003 ORTHO05D004595 3.8e-70 268.5 169 79.3
AUR62037745 Chenopodium quinoa HOM05D004003 ORTHO05D004595 4.9e-70 268.1 151 85.4
Thhalv10014849m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 8.4e-70 267.3 171 78.9
Prupe.2G302600 Prunus persica HOM05D004003 ORTHO05D004595 1.1e-69 266.9 153 86.3
BraA03t10847Z Brassica rapa HOM05D004003 ORTHO05D004595 1.9e-69 266.2 177 75.7
Gohir.D12G255500 Gossypium hirsutum HOM05D004003 ORTHO05D004595 1.9e-69 266.2 176 76.7
Gohir.D12G255550 Gossypium hirsutum HOM05D004003 ORTHO05D004595 1.9e-69 266.2 176 76.7
AL8G27280 Arabidopsis lyrata HOM05D004003 ORTHO05D004595 3.2e-69 265.4 171 78.4
BcaB08g35638 Brassica carinata HOM05D004003 ORTHO05D004595 3.2e-69 265.4 171 77.8
PGR042G1718 Punica granatum HOM05D004003 ORTHO05D004595 3.2e-69 265.4 169 79.3
BcaB01g04212 Brassica carinata HOM05D004003 ORTHO05D004595 4.1e-69 265.0 168 78.6
CARHR265770 Cardamine hirsuta HOM05D004003 ORTHO05D004595 4.1e-69 265.0 170 76.5
Ciclev10006072m.g Citrus clementina HOM05D004003 ORTHO05D004595 4.1e-69 265.0 167 80.8
FAN06G3020 Fragaria x ananassa HOM05D004003 ORTHO05D004595 5.4e-69 264.6 153 85.0
FAN10G2159 Fragaria x ananassa HOM05D004003 ORTHO05D004595 5.4e-69 264.6 176 77.8
Nn6g32413 Nelumbo nucifera HOM05D004003 ORTHO05D004595 5.4e-69 264.6 170 77.1
TWI23G0858 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 5.4e-69 264.6 161 83.2
FAN03G0349 Fragaria x ananassa HOM05D004003 ORTHO05D004595 7.1e-69 264.2 153 84.3
FAN03G2611 Fragaria x ananassa HOM05D004003 ORTHO05D004595 7.1e-69 264.2 153 84.3
Glyma.09G129000 Glycine max HOM05D004003 ORTHO05D004595 7.1e-69 264.2 164 81.7
arahy.Tifrunner.gnm1.ann1.SB31NP Arachis hypogaea HOM05D004003 ORTHO05D004595 9.2e-69 263.8 166 80.7
A03p15550 Brassica napus HOM05D004003 ORTHO05D004595 9.2e-69 263.8 177 75.1
ECA233G0998 Erigeron canadensis HOM05D004003 ORTHO05D004595 9.2e-69 263.8 181 75.7
FvH4_7g30480 Fragaria vesca HOM05D004003 ORTHO05D004595 9.2e-69 263.8 176 77.8
FAN01G1512 Fragaria x ananassa HOM05D004003 ORTHO05D004595 9.2e-69 263.8 176 77.8
TAR629G0127 Trochodendron aralioides HOM05D004003 ORTHO05D004595 9.2e-69 263.8 151 85.4
RcHm_v2.0_Chr1g0378851 Rosa chinensis HOM05D004003 ORTHO05D004595 1.2e-68 263.5 176 77.8
Sp7g25950 Schrenkiella parvula HOM05D004003 ORTHO05D004595 1.2e-68 263.5 171 77.2
BcaC01g06202 Brassica carinata HOM05D004003 ORTHO05D004595 1.6e-68 263.1 170 75.3
C03p18160 Brassica napus HOM05D004003 ORTHO05D004595 1.6e-68 263.1 170 75.3
BraA10t43109Z Brassica rapa HOM05D004003 ORTHO05D004595 1.6e-68 263.1 171 76.6
MD01G1210300 Malus domestica HOM05D004003 ORTHO05D004595 1.6e-68 263.1 153 83.0
Aa31LG3G9080 Aethionema arabicum HOM05D004003 ORTHO05D004595 2.1e-68 262.7 153 83.0
MD07G1280400 Malus domestica HOM05D004003 ORTHO05D004595 2.1e-68 262.7 153 83.7
Sp6g15000 Schrenkiella parvula HOM05D004003 ORTHO05D004595 2.1e-68 262.7 171 77.2
BolC3t14217H Brassica oleracea HOM05D004003 ORTHO05D004595 2.7e-68 262.3 177 74.6
Carub.0008s1300 Capsella rubella HOM05D004003 ORTHO05D004595 2.7e-68 262.3 171 77.2
FAN06G1184 Fragaria x ananassa HOM05D004003 ORTHO05D004595 3.5e-68 261.9 176 77.3
FAN10G2319 Fragaria x ananassa HOM05D004003 ORTHO05D004595 3.5e-68 261.9 176 77.3
A02p11580 Brassica napus HOM05D004003 ORTHO05D004595 4.6e-68 261.5 166 78.3
BraA02t06220Z Brassica rapa HOM05D004003 ORTHO05D004595 4.6e-68 261.5 166 78.3
Gohir.A12G253200 Gossypium hirsutum HOM05D004003 ORTHO05D004595 4.6e-68 261.5 176 75.6
Atru.chr1.335 Acer truncatum HOM05D004003 ORTHO05D004595 6.0e-68 261.2 176 76.1
BcaC04g20535 Brassica carinata HOM05D004003 ORTHO05D004595 6.0e-68 261.2 171 76.6
C09p42440 Brassica napus HOM05D004003 ORTHO05D004595 6.0e-68 261.2 171 76.6
Phvul.004G105700 Phaseolus vulgaris HOM05D004003 ORTHO05D004595 6.0e-68 261.2 166 78.9
TWI14G1326 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 7.8e-68 260.8 154 84.4
arahy.Tifrunner.gnm1.ann1.R03NAB Arachis hypogaea HOM05D004003 ORTHO05D004595 1.3e-67 260.0 166 79.5
A10p10290 Brassica napus HOM05D004003 ORTHO05D004595 1.7e-67 259.6 171 76.0
VMungo0464G2050 Vigna mungo HOM05D004003 ORTHO05D004595 1.7e-67 259.6 168 76.2
AT5G52840 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 3.0e-67 258.8 171 76.6
BcaB05g21985 Brassica carinata HOM05D004003 ORTHO05D004595 3.9e-67 258.5 168 76.2
vmacro06614 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 6.6e-67 257.7 227 61.2
Dinv28379 Davidia involucrata HOM05D004003 ORTHO05D004595 1.9e-66 256.1 148 85.1
Psat5g299680 Pisum sativum HOM05D004003 ORTHO05D004595 1.9e-66 256.1 170 75.3
PSO017G3679 Papaver somniferum HOM05D004003 ORTHO05D004595 4.3e-66 255.0 151 81.5
Ca_20595_v3 Cicer arietinum L. HOM05D004003 ORTHO05D004595 5.6e-66 254.6 172 74.4
Psat0s1604g0040 Pisum sativum HOM05D004003 ORTHO05D004595 1.2e-65 253.4 176 72.7
CANSAT21G1389 Cannabis sativa HOM05D004003 ORTHO05D004595 2.1e-65 252.7 152 79.6
CANSAT21G1446 Cannabis sativa HOM05D004003 ORTHO05D004595 2.1e-65 252.7 152 79.6
HPP92_001384 Vanilla planifolia HOM05D004003 ORTHO05D004595 2.1e-65 252.7 158 77.2
PSO478G4828 Papaver somniferum HOM05D004003 ORTHO05D004595 4.7e-65 251.5 154 81.2
Potri.004G071900 Populus trichocarpa HOM05D004003 ORTHO05D004595 1.4e-64 250.0 173 72.3
TPR.G27150 Trifolium pratense HOM05D004003 ORTHO05D004595 1.4e-64 250.0 180 71.7
Sabra17G0124400 Salix brachista HOM05D004003 ORTHO05D004595 4.0e-64 248.4 153 77.8
Medtr6g053280 Medicago truncatula HOM05D004003 ORTHO05D004595 9.0e-64 247.3 151 80.1
C02p19300 Brassica napus HOM05D004003 ORTHO05D004595 3.4e-63 245.4 176 72.2
BolC2t08066H Brassica oleracea HOM05D004003 ORTHO05D004595 3.4e-63 245.4 176 72.2
Sabra04G0047300 Salix brachista HOM05D004003 ORTHO05D004595 5.8e-63 244.6 173 72.3
Potri.017G149100 Populus trichocarpa HOM05D004003 ORTHO05D004595 1.7e-62 243.0 171 70.8
CDE05G0545 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 3.8e-62 241.9 172 71.5
Zm00001eb015010 Zea mays HOM05D004003 ORTHO05D004595 1.4e-61 240.0 159 73.6
CDE05G3305 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 3.2e-61 238.8 172 69.8
Os03g0313000 Oryza sativa ssp. japonica HOM05D004003 ORTHO05D004595 2.1e-60 236.1 159 71.7
ATR0721G154 Amborella trichopoda HOM05D004003 ORTHO05D004595 3.3e-58 228.8 146 74.7
AUR62042233 Chenopodium quinoa HOM05D004003 ORTHO05D004595 2.1e-57 226.1 151 74.8
PSO478G1314 Papaver somniferum HOM05D004003 ORTHO05D004595 4.5e-55 218.4 126 81.7
SEGI_14933 Sequoiadendron giganteum HOM05D004003 ORTHO05D004595 9.3e-53 210.7 144 67.4
Haze_00063 Corylus avellana HOM05D004003 ORTHO05D004595 1.6e-52 209.9 127 80.3
BolC9t57124H Brassica oleracea HOM05D004003 ORTHO05D004595 1.3e-51 206.8 171 63.7
TAR636G0624 Trochodendron aralioides HOM05D004003 ORTHO05D004595 3.9e-51 205.3 108 87.0
MD00G1172600 Malus domestica HOM05D004003 ORTHO05D004595 3.7e-49 198.7 132 74.2
HanXRQChr10g0304961 Helianthus annuus HOM05D004003 ORTHO05D004595 3.5e-44 182.2 107 87.9
Pp3c5_12290 Physcomitrium patens HOM05D004003 ORTHO05D004595 3.5e-44 182.2 136 65.4
AagrBONN_evm.TU.Sc2ySwM_344.4010 Anthoceros agrestis HOM05D004003 ORTHO05D004595 1.0e-43 180.6 136 64.7
MD13G1261600 Malus domestica HOM05D004003 ORTHO05D004595 1.0e-43 180.6 111 76.6
vmacro09809 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 3.0e-43 179.1 147 59.9
Ah.10g032500 Amaranthus hybridus HOM05D004003 ORTHO05D004595 1.1e-42 177.2 168 60.7
Mapoly0111s0029 Marchantia polymorpha HOM05D004003 ORTHO05D004595 8.2e-41 171.0 136 61.8
CBR_g31069 Chara braunii HOM05D004003 ORTHO05D004595 1.4e-40 170.2 135 59.3
Zm00001eb395850 Zea mays HOM05D004003 ORTHO05D004595 3.5e-36 155.6 125 66.4
Thhalv10015894m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 1.1e-34 150.6 171 55.6
BcaC03g14495 Brassica carinata HOM05D004003 ORTHO05D004595 1.4e-32 143.7 90 83.3
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 1.8e-32 143.3 166 51.8
RcHm_v2.0_Chr1g0362161 Rosa chinensis HOM05D004003 ORTHO05D004595 2.4e-32 142.9 88 85.2
SMO119G0129 Selaginella moellendorffii HOM05D004003 ORTHO05D004595 3.1e-32 142.5 120 55.8
Ah.03g141030 Amaranthus hybridus HOM05D004003 ORTHO05D004595 2.3e-27 126.3 91 68.1
Psat6g098040 Pisum sativum HOM05D000395 ORTHO05D004595 2.2e-25 119.8 94 66.0
CAN.G204.11 Capsicum annuum HOM05D004003 ORTHO05D004595 6.3e-25 118.2 55 92.7
ECA240G4047 Erigeron canadensis HOM05D004003 ORTHO05D004595 8.2e-25 117.9 136 42.6
ECA238G0868 Erigeron canadensis HOM05D004003 ORTHO05D004595 4.1e-24 115.5 185 39.5
ECA240G1980 Erigeron canadensis HOM05D004003 ORTHO05D004595 4.1e-24 115.5 137 44.5
ECA240G4361 Erigeron canadensis HOM05D004003 ORTHO05D004595 4.1e-24 115.5 137 44.5
Dinv24022 Davidia involucrata HOM05D004003 ORTHO05D004595 1.9e-21 106.7 71 73.2
AT4G28005 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 2.5e-21 106.3 171 43.9
BcaC03g14494 Brassica carinata HOM05D004003 ORTHO05D004595 2.2e-17 93.2 72 61.1
COL.COLO4_06858 Corchorus olitorius HOM05D004003 ORTHO05D004595 2.2e-17 93.2 45 84.4
MCO01G593 Micromonas commoda HOM05D004003 ORTHO05D004595 8.2e-17 91.3 100 44.0
MCO01G594 Micromonas commoda HOM05D004003 ORTHO05D004595 8.2e-17 91.3 100 44.0
CAN.G640.19 Capsicum annuum HOM05D004003 ORTHO05D004595 1.1e-16 90.9 68 64.7
Rhsim03G0124900 Rhododendron simsii HOM05D004003 ORTHO05D004595 1.5e-15 87.0 52 80.8
Haze_26197 Corylus avellana HOM05D004003 ORTHO05D004595 5.0e-14 82.0 101 41.6
ATR0721G175 Amborella trichopoda HOM05D004003 ORTHO05D004595 1.8e-11 73.6 47 59.6
Cre13.g568800 Chlamydomonas reinhardtii HOM05D004003 ORTHO05D004595 3.0e-11 72.8 95 43.2
PRCOL_00006691 Prasinoderma coloniale HOM05D004003 ORTHO05D004595 3.8e-06 55.8 97 38.1


User provided reference genes

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