Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05166 Striga asiatica HOM05D016874 ORTHO05D000126 1.9e-90 335.9 173 100.0
SGA_v2.0_scaffold6G03387 Striga asiatica HOM05D016874 ORTHO05D404320 5.0e-19 98.6 122 42.6
SGA_v2.0_scaffold88G27315 Striga asiatica HOM05D016874 ORTHO05D402186 2.1e-17 93.2 122 41.8
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-13 80.5 74 48.6
SGA_v2.0_scaffold332G48961 Striga asiatica HOM05D010621 ORTHO05D000126 3.5e-12 75.9 74 51.4
SGA_v2.0_scaffold161G37849 Striga asiatica HOM05D025911 ORTHO05D000006 6.5e-11 71.6 67 49.3
SGA_v2.0_scaffold14G07069 Striga asiatica HOM05D000367 ORTHO05D002159 1.1e-10 70.9 47 59.6
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 4.2e-10 68.9 82 40.2
SGA_v2.0_scaffold7G03810 Striga asiatica HOM05D010621 ORTHO05D000126 5.5e-10 68.6 70 42.9
SGA_v2.0_scaffold283G46955 Striga asiatica HOM05D010621 ORTHO05D000126 9.4e-10 67.8 52 53.8
SGA_v2.0_scaffold297G47586 Striga asiatica HOM05D015799 ORTHO05D405253 9.4e-10 67.8 117 35.9
SGA_v2.0_scaffold177G39429 Striga asiatica HOM05D016874 ORTHO05D398971 2.1e-09 66.6 115 33.9
SGA_v2.0_scaffold234G43650 Striga asiatica HOM05D037634 ORTHO05D000126 3.6e-09 65.9 75 41.3
SGA_v2.0_scaffold45G17215 Striga asiatica HOM05D010621 ORTHO05D000126 3.6e-09 65.9 52 50.0
SGA_v2.0_scaffold79G25635 Striga asiatica HOM05D010621 ORTHO05D000126 4.7e-09 65.5 52 51.9
SGA_v2.0_scaffold56G20035 Striga asiatica HOM05D010621 ORTHO05D000126 8.0e-09 64.7 75 46.7
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 1.0e-08 64.3 45 53.3
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 1.0e-08 64.3 46 52.2
SGA_v2.0_scaffold203G41506 Striga asiatica HOM05D015799 ORTHO05D010636 1.0e-08 64.3 111 36.9
SGA_v2.0_scaffold16G07515 Striga asiatica HOM05D041003 ORTHO05D000006 1.4e-08 63.9 47 55.3
SGA_v2.0_scaffold73G24374 Striga asiatica HOM05D010621 ORTHO05D000126 1.8e-08 63.5 52 48.1
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 2.3e-08 63.2 52 50.0
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 2.3e-08 63.2 63 47.6
SGA_v2.0_scaffold72G24063 Striga asiatica HOM05D000047 ORTHO05D000044 2.3e-08 63.2 76 46.1
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 3.0e-08 62.8 118 30.5
Dinv19695 Davidia involucrata HOM05D000003 ORTHO05D000126 4.0e-08 62.4 66 43.9
SGA_v2.0_scaffold321G48584 Striga asiatica HOM05D010621 ORTHO05D000126 4.0e-08 62.4 84 38.1
SGA_v2.0_scaffold11G05749 Striga asiatica HOM05D017992 ORTHO05D000126 6.8e-08 61.6 63 42.9
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 8.8e-08 61.2 66 42.4
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 8.8e-08 61.2 135 34.1
SGA_v2.0_scaffold19G08685 Striga asiatica HOM05D017992 ORTHO05D000126 1.5e-07 60.5 65 43.1
SGA_v2.0_scaffold67G22757 Striga asiatica HOM05D041003 ORTHO05D000006 1.5e-07 60.5 45 51.1
TWI31G0369 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.5e-07 60.5 69 39.1
SGA_v2.0_scaffold234G43655 Striga asiatica HOM05D016874 ORTHO05D405871 4.4e-07 58.9 79 45.6
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 5.7e-07 58.5 69 44.9
Dinv11094 Davidia involucrata HOM05D000003 ORTHO05D000126 7.5e-07 58.2 70 38.6
Rhsim09G0106200 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.3e-06 57.4 59 39.0
Dinv16534 Davidia involucrata HOM05D000003 ORTHO05D000126 1.7e-06 57.0 73 35.6
SGA_v2.0_scaffold23G10110 Striga asiatica HOM05D017601 ORTHO05D000006 1.7e-06 57.0 62 38.7
Dinv30133 Davidia involucrata HOM05D000003 ORTHO05D000126 2.2e-06 56.6 46 47.8
Hma1.2p1_0167F.1_g073680 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 2.8e-06 56.2 64 46.9
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.8e-06 56.2 73 41.1
SGA_v2.0_scaffold253G45145 Striga asiatica HOM05D039416 ORTHO05D000126 3.7e-06 55.8 115 36.5
SGA_v2.0_scaffold85G26726 Striga asiatica HOM05D016874 ORTHO05D405020 3.7e-06 55.8 52 50.0
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 4.9e-06 55.5 84 38.1
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 6.3e-06 55.1 72 34.7
QL12p015288 Quercus lobata HOM05D000003 ORTHO05D000126 6.3e-06 55.1 70 44.3
QL93p2011_0013 Quercus lobata HOM05D000003 ORTHO05D000126 6.3e-06 55.1 70 44.3
AUR62006279 Chenopodium quinoa HOM05D000003 ORTHO05D000126 8.3e-06 54.7 49 46.9
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 8.3e-06 54.7 58 41.4


User provided reference genes

Program Settings